RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 CLEC10AQ8IUN9 316 aa11.64□□□□□ -0.55
RNF43-207ENST00000583753 FBXL16Q8N461 479 aa11.64□□□□□ -0.55
RNF43-207ENST00000583753 CELF1Q92879 486 aaKnown RBP11.64□□□□□ -0.55
RNF43-207ENST00000583753 DCP1AQ9NPI6 582 aaPredicted RBP11.64□□□□□ -0.55
RNF43-207ENST00000583753 FAM153AQ9UHL3 310 aa11.64□□□□□ -0.55
RNF43-207ENST00000583753 KIAA1024Q9UPX6 916 aa11.64□□□□□ -0.55
RNF43-207ENST00000583753 CLIC2O15247 247 aa11.64□□□□□ -0.55
RNF43-207ENST00000583753 SRGNP10124 158 aa11.64□□□□□ -0.55
RNF43-207ENST00000583753 CRKLP46109 303 aaKnown RBP11.64□□□□□ -0.55
RNF43-207ENST00000583753 VPS41P49754 854 aa11.64□□□□□ -0.55
RNF43-207ENST00000583753 ADAM9Q13443 819 aa11.64□□□□□ -0.55
RNF43-207ENST00000583753 UBE4AQ14139 1066 aa11.64□□□□□ -0.55
RNF43-207ENST00000583753 TRADDQ15628 312 aa11.64□□□□□ -0.55
RNF43-207ENST00000583753 IL17AQ16552 155 aa11.64□□□□□ -0.55
RNF43-207ENST00000583753 KRT25Q7Z3Z0 450 aa11.64□□□□□ -0.55
RNF43-207ENST00000583753 TRIM9Q9C026 710 aa11.64□□□□□ -0.55
RNF43-207ENST00000583753 MLXIPLQ9NP71 852 aa11.64□□□□□ -0.55
RNF43-207ENST00000583753 PKD2L1Q9P0L9 805 aa11.64□□□□□ -0.55
RNF43-207ENST00000583753 CETN3O15182 167 aa11.63□□□□□ -0.55
RNF43-207ENST00000583753 EPHB6O15197 1021 aa11.63□□□□□ -0.55
RNF43-207ENST00000583753 TRAPPC10P48553 1259 aa11.63□□□□□ -0.55
RNF43-207ENST00000583753 HDLBPQ00341 1268 aaKnown RBP11.63□□□□□ -0.55
RNF43-207ENST00000583753 DHX9Q08211 1270 aaKnown RBP11.63□□□□□ -0.55
RNF43-207ENST00000583753 FAM26FQ5R3K3 315 aa11.63□□□□□ -0.55
RNF43-207ENST00000583753 GPBP1Q86WP2 473 aa11.63□□□□□ -0.55
RNF43-207ENST00000583753 ANKRD42Q8N9B4 389 aa11.63□□□□□ -0.55
RNF43-207ENST00000583753 ZNF287Q9HBT7 754 aa11.63□□□□□ -0.55
RNF43-207ENST00000583753 PANK4Q9NVE7 773 aa11.63□□□□□ -0.55
RNF43-207ENST00000583753 DNAJC17Q9NVM6 304 aaKnown RBP11.63□□□□□ -0.55
RNF43-207ENST00000583753 PLEKHG2Q9H7P9 1386 aa11.63□□□□□ -0.55
RNF43-207ENST00000583753 CNTNAP5Q8WYK1 1306 aa11.63□□□□□ -0.55
RNF43-207ENST00000583753 FAM237AA0A1B0GTK4 181 aa11.63□□□□□ -0.55
RNF43-207ENST00000583753 TDP2O95551 362 aa11.63□□□□□ -0.55
RNF43-207ENST00000583753 NEFHP12036 1026 aa11.63□□□□□ -0.55
RNF43-207ENST00000583753 FAM133BQ5BKY9 247 aaKnown RBP11.63□□□□□ -0.55
RNF43-207ENST00000583753 DDX12PQ92771 950 aa11.63□□□□□ -0.55
RNF43-207ENST00000583753 SETDB2Q96T68 719 aa11.63□□□□□ -0.55
RNF43-207ENST00000583753 SLIT1O75093 1534 aa11.63□□□□□ -0.55
RNF43-207ENST00000583753 CACNA1FO60840 1977 aa11.63□□□□□ -0.55
RNF43-207ENST00000583753 GLI1P08151 1106 aa11.63□□□□□ -0.55
RNF43-207ENST00000583753 RPS8P62241 208 aaKnown RBP11.63□□□□□ -0.55
RNF43-207ENST00000583753 SEC23AQ15436 765 aa11.63□□□□□ -0.55
RNF43-207ENST00000583753 EMBQ6PCB8 327 aa11.63□□□□□ -0.55
RNF43-207ENST00000583753 APTXQ7Z2E3 356 aaKnown RBP11.63□□□□□ -0.55
RNF43-207ENST00000583753 CACNA2D3Q8IZS8 1091 aa11.63□□□□□ -0.55
RNF43-207ENST00000583753 ARHGAP20Q9P2F6 1191 aa11.63□□□□□ -0.55
RNF43-207ENST00000583753 NPHP3-ACAD11A0A0J9YXS1 232 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 SFI1A8K8P3 1242 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 TBCAO75347 108 aaKnown RBP11.62□□□□□ -0.55
RNF43-207ENST00000583753 ACTN1P12814 892 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 COPB2P35606 906 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 CCDC65Q8IXS2 484 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 SYCP3Q8IZU3 236 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 PPP1R12BO60237 982 aaPredicted RBP11.62□□□□□ -0.55
RNF43-207ENST00000583753 CYP19A1P11511 503 aaPredicted RBP11.62□□□□□ -0.55
RNF43-207ENST00000583753 GUCY2CP25092 1073 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 LSP1P33241 339 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 PLTPP55058 493 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 AMPD2Q01433 879 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 PABPC4Q13310 644 aaKnown RBP eCLIP11.62□□□□□ -0.55
RNF43-207ENST00000583753 DDB1Q16531 1140 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 FAM83BQ5T0W9 1011 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 HIBCHQ6NVY1 386 aaPredicted RBP11.62□□□□□ -0.55
RNF43-207ENST00000583753 RETREG2Q8NC44 543 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 N4BP2L2Q92802 583 aaPredicted RBP11.62□□□□□ -0.55
RNF43-207ENST00000583753 LRRC45Q96CN5 670 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 THOC1Q96FV9 657 aaKnown RBP11.62□□□□□ -0.55
RNF43-207ENST00000583753 CCT8L2Q96SF2 557 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 PACSIN1Q9BY11 444 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 SH2D4AQ9H788 454 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 AMACRQ9UHK6 382 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 TCEAL9Q9UHQ7 104 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 PCDHA6Q9UN73 950 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 PCDHA8Q9Y5H6 950 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 GOLGA6L10A0A0M3HER8 536 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 ANO9A1A5B4 782 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 CTNND1O60716 968 aaKnown RBP11.62□□□□□ -0.55
RNF43-207ENST00000583753 KLRC1P26715 233 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 PEX19P40855 299 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 MAGOHP61326 146 aaKnown RBP11.62□□□□□ -0.55
RNF43-207ENST00000583753 TRIM28Q13263 835 aaKnown RBP11.62□□□□□ -0.55
RNF43-207ENST00000583753 ZNF211Q13398 564 aaPredicted RBP11.62□□□□□ -0.55
RNF43-207ENST00000583753 USH1GQ495M9 461 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 ARL6IP4Q66PJ3 421 aaKnown RBP11.62□□□□□ -0.55
RNF43-207ENST00000583753 NLRP14Q86W24 1093 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 IRF2BP1Q8IU81 584 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 GLIS3Q8NEA6 775 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 MAGOHBQ96A72 148 aaKnown RBP11.62□□□□□ -0.55
RNF43-207ENST00000583753 MTMR8Q96EF0 704 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 VIPAS39Q9H9C1 493 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 PTPN22Q9Y2R2 807 aa11.62□□□□□ -0.55
RNF43-207ENST00000583753 UTP11Q9Y3A2 253 aaKnown RBP11.62□□□□□ -0.55
RNF43-207ENST00000583753 RICTORQ6R327 1708 aa11.61□□□□□ -0.55
RNF43-207ENST00000583753 PIK3C2AO00443 1686 aa11.61□□□□□ -0.55
RNF43-207ENST00000583753 A0A1W2PQC6 194 aa11.61□□□□□ -0.55
RNF43-207ENST00000583753 PHF20L1A8MW92 1017 aa11.61□□□□□ -0.55
RNF43-207ENST00000583753 E9PMD0 336 aa11.61□□□□□ -0.55
RNF43-207ENST00000583753 NEBLO76041 1014 aa11.61□□□□□ -0.55
RNF43-207ENST00000583753 ADCY7P51828 1080 aa11.61□□□□□ -0.55
RNF43-207ENST00000583753 SNAP25P60880 206 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms