RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 PCDHA13Q9Y5I0 950 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 hCG_1642624A0A1W2PR95 340 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 GRID2IPA4D2P6 1211 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 NOP56O00567 594 aaKnown RBP11.66□□□□□ -0.54
SEC22B-201ENST00000578049 MAP3K7O43318 606 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 PHKG2P15735 406 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 PPP2R5AQ15172 486 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 SGO2Q562F6 1265 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 TGFBRAP1Q8WUH2 860 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 STOML1Q9UBI4 398 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 CFAP73A6NFT4 308 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 K7ENM7 598 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 TCP11X2Q5H9J9 407 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 FAM186BQ8IYM0 893 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 ZMYND12Q9H0C1 365 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 SH3GLB2Q9NR46 395 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 PKD2L1Q9P0L9 805 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 HESX1Q9UBX0 185 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 ATP10AO60312 1499 aa11.65□□□□□ -0.54
SEC22B-201ENST00000578049 GPC4O75487 556 aa11.65□□□□□ -0.54
SEC22B-201ENST00000578049 ATF7P17544 494 aaPredicted RBP11.65□□□□□ -0.54
SEC22B-201ENST00000578049 SERPINB6P35237 376 aa11.65□□□□□ -0.54
SEC22B-201ENST00000578049 PICK1Q9NRD5 415 aa11.65□□□□□ -0.54
SEC22B-201ENST00000578049 SAMSN1Q9NSI8 373 aaKnown RBP11.65□□□□□ -0.54
SEC22B-201ENST00000578049 POLR2MP0CAP2 368 aa11.65□□□□□ -0.54
SEC22B-201ENST00000578049 ADD2P35612 726 aa11.65□□□□□ -0.54
SEC22B-201ENST00000578049 LIG4P49917 911 aa11.65□□□□□ -0.54
SEC22B-201ENST00000578049 MB21D1Q8N884 522 aa11.65□□□□□ -0.54
SEC22B-201ENST00000578049 ANAPC5Q9UJX4 755 aa11.65□□□□□ -0.54
SEC22B-201ENST00000578049 GOLGA8CPA6NN73 597 aa11.65□□□□□ -0.54
SEC22B-201ENST00000578049 LGALS16A8MUM7 142 aa11.65□□□□□ -0.54
SEC22B-201ENST00000578049 FBXO11Q86XK2 927 aa11.65□□□□□ -0.54
SEC22B-201ENST00000578049 TRIM50Q86XT4 487 aa11.65□□□□□ -0.54
SEC22B-201ENST00000578049 SIRT2Q8IXJ6 389 aa11.65□□□□□ -0.54
SEC22B-201ENST00000578049 SERPINI1Q99574 410 aa11.65□□□□□ -0.54
SEC22B-201ENST00000578049 NCKAP5LQ9HCH0 1330 aa11.65□□□□□ -0.54
SEC22B-201ENST00000578049 SP4Q02446 784 aa11.65□□□□□ -0.54
SEC22B-201ENST00000578049 KRT31Q15323 416 aa11.65□□□□□ -0.54
SEC22B-201ENST00000578049 PRR16Q569H4 304 aa11.65□□□□□ -0.54
SEC22B-201ENST00000578049 PI4K2BQ8TCG2 481 aa11.65□□□□□ -0.54
SEC22B-201ENST00000578049 AMNQ9BXJ7 453 aa11.65□□□□□ -0.54
SEC22B-201ENST00000578049 PACSIN2Q9UNF0 486 aaPredicted RBP11.65□□□□□ -0.54
SEC22B-201ENST00000578049 NOVA2Q9UNW9 492 aaKnown RBP11.65□□□□□ -0.54
SEC22B-201ENST00000578049 AFG3L2Q9Y4W6 797 aa11.65□□□□□ -0.54
SEC22B-201ENST00000578049 TTI1O43156 1089 aa11.65□□□□□ -0.54
SEC22B-201ENST00000578049 N4BP2L2Q92802 583 aaPredicted RBP11.65□□□□□ -0.54
SEC22B-201ENST00000578049 GNPATO15228 680 aa11.65□□□□□ -0.55
SEC22B-201ENST00000578049 MSH2P43246 934 aa11.65□□□□□ -0.55
SEC22B-201ENST00000578049 CENPKQ9BS16 269 aa11.65□□□□□ -0.55
SEC22B-201ENST00000578049 BAG5Q9UL15 447 aa11.65□□□□□ -0.55
SEC22B-201ENST00000578049 SYNGAP1Q96PV0 1343 aa11.65□□□□□ -0.55
SEC22B-201ENST00000578049 YWHAGP61981 247 aaKnown RBP eCLIP11.64□□□□□ -0.55
SEC22B-201ENST00000578049 DR1Q01658 176 aa11.64□□□□□ -0.55
SEC22B-201ENST00000578049 ST13P4Q8IZP2 240 aaPredicted RBP11.64□□□□□ -0.55
SEC22B-201ENST00000578049 PAGE5Q96GU1 130 aa11.64□□□□□ -0.55
SEC22B-201ENST00000578049 NCAPGQ9BPX3 1015 aa11.64□□□□□ -0.55
SEC22B-201ENST00000578049 VPS41P49754 854 aa11.64□□□□□ -0.55
SEC22B-201ENST00000578049 EIF6P56537 245 aaKnown RBP11.64□□□□□ -0.55
SEC22B-201ENST00000578049 E2F5Q15329 346 aa11.64□□□□□ -0.55
SEC22B-201ENST00000578049 TAF12Q16514 161 aa11.64□□□□□ -0.55
SEC22B-201ENST00000578049 ARHGAP18Q8N392 663 aa11.64□□□□□ -0.55
SEC22B-201ENST00000578049 LRGUKQ96M69 825 aa11.64□□□□□ -0.55
SEC22B-201ENST00000578049 TRIM6Q9C030 488 aaPredicted RBP11.64□□□□□ -0.55
SEC22B-201ENST00000578049 TPX2Q9ULW0 747 aaKnown RBP11.64□□□□□ -0.55
SEC22B-201ENST00000578049 PRDM15P57071 1507 aaPredicted RBP11.64□□□□□ -0.55
SEC22B-201ENST00000578049 SESN3P58005 492 aa11.64□□□□□ -0.55
SEC22B-201ENST00000578049 MESDQ14696 234 aa11.64□□□□□ -0.55
SEC22B-201ENST00000578049 SAAL1Q96ER3 474 aa11.64□□□□□ -0.55
SEC22B-201ENST00000578049 CHAMP1Q96JM3 812 aa11.64□□□□□ -0.55
SEC22B-201ENST00000578049 DMP1Q13316 513 aaPredicted RBP11.64□□□□□ -0.55
SEC22B-201ENST00000578049 LRRC23Q53EV4 343 aaPredicted RBP11.64□□□□□ -0.55
SEC22B-201ENST00000578049 MUM1L1Q5H9M0 696 aa11.64□□□□□ -0.55
SEC22B-201ENST00000578049 ATG16L1Q676U5 607 aa11.64□□□□□ -0.55
SEC22B-201ENST00000578049 ZNF589Q86UQ0 364 aaPredicted RBP11.64□□□□□ -0.55
SEC22B-201ENST00000578049 ATP2B4P23634 1241 aa11.64□□□□□ -0.55
SEC22B-201ENST00000578049 ODR4Q5SWX8 454 aa11.64□□□□□ -0.55
SEC22B-201ENST00000578049 ZNF653Q96CK0 615 aa11.64□□□□□ -0.55
SEC22B-201ENST00000578049 FOXP2O15409 715 aa11.63□□□□□ -0.55
SEC22B-201ENST00000578049 MYCLP12524 364 aaPredicted RBP11.63□□□□□ -0.55
SEC22B-201ENST00000578049 MAPK4P31152 587 aa11.63□□□□□ -0.55
SEC22B-201ENST00000578049 DYNC1I2Q13409 638 aaKnown RBP11.63□□□□□ -0.55
SEC22B-201ENST00000578049 ALKBH5Q6P6C2 394 aaKnown RBP11.63□□□□□ -0.55
SEC22B-201ENST00000578049 RIOK1Q9BRS2 568 aaKnown RBP11.63□□□□□ -0.55
SEC22B-201ENST00000578049 IPO11Q9UI26 975 aaKnown RBP11.63□□□□□ -0.55
SEC22B-201ENST00000578049 TMEM2Q9UHN6 1383 aa11.63□□□□□ -0.55
SEC22B-201ENST00000578049 A0A1W2PQC6 194 aa11.63□□□□□ -0.55
SEC22B-201ENST00000578049 MT-ND3P03897 115 aa11.63□□□□□ -0.55
SEC22B-201ENST00000578049 PDE1BQ01064 536 aa11.63□□□□□ -0.55
SEC22B-201ENST00000578049 C2orf54Q08AI8 447 aa11.63□□□□□ -0.55
SEC22B-201ENST00000578049 MKRN3Q13064 507 aaKnown RBP11.63□□□□□ -0.55
SEC22B-201ENST00000578049 FMR1NBQ8N0W7 255 aaPredicted RBP11.63□□□□□ -0.55
SEC22B-201ENST00000578049 MLH3Q9UHC1 1453 aa11.63□□□□□ -0.55
SEC22B-201ENST00000578049 MAP3K15Q6ZN16 1313 aa11.63□□□□□ -0.55
SEC22B-201ENST00000578049 RIMBP2O15034 1052 aa11.63□□□□□ -0.55
SEC22B-201ENST00000578049 STX1BP61266 288 aa11.63□□□□□ -0.55
SEC22B-201ENST00000578049 KMT5BQ4FZB7 885 aa11.63□□□□□ -0.55
SEC22B-201ENST00000578049 KRT39Q6A163 491 aa11.63□□□□□ -0.55
SEC22B-201ENST00000578049 RDH13Q8NBN7 331 aa11.63□□□□□ -0.55
SEC22B-201ENST00000578049 KIAA1024Q9UPX6 916 aa11.63□□□□□ -0.55
SEC22B-201ENST00000578049 GJA10Q969M2 543 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms