RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 PSMD2Q13200 908 aa15.5■□□□□ 0.07
GTF3C1-203ENST00000562609 GRAPQ13588 217 aa15.5■□□□□ 0.07
GTF3C1-203ENST00000562609 EMC10Q5UCC4 262 aa15.5■□□□□ 0.07
GTF3C1-203ENST00000562609 MIS18BP1Q6P0N0 1132 aa15.5■□□□□ 0.07
GTF3C1-203ENST00000562609 GRAPLQ8TC17 118 aaPredicted RBP15.5■□□□□ 0.07
GTF3C1-203ENST00000562609 RPGRQ92834 1020 aaKnown RBP15.5■□□□□ 0.07
GTF3C1-203ENST00000562609 FAM210AQ96ND0 272 aa15.5■□□□□ 0.07
GTF3C1-203ENST00000562609 EBF2Q9HAK2 575 aa15.5■□□□□ 0.07
GTF3C1-203ENST00000562609 KRT86O43790 486 aa15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 SERPINB2P05120 415 aa15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 NR5A1Q13285 461 aa15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 KRT31Q15323 416 aa15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 ARMC3Q5W041 872 aa15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 HIBCHQ6NVY1 386 aaPredicted RBP15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 IQCKQ8N0W5 287 aa15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 CCDC47Q96A33 483 aaKnown RBP15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 STIM2Q9P246 746 aa15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 C15orf41Q9Y2V0 281 aa15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 FMNL1O95466 1100 aaPredicted RBP15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 IFNAR1P17181 557 aa15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 CUL4BQ13620 913 aa15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 SEC23AQ15436 765 aa15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 QPCTQ16769 361 aa15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 CREG2Q8IUH2 290 aa15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 SPATA4Q8NEY3 305 aa15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 ZSCAN10Q96SZ4 725 aaPredicted RBP15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 LACRTQ9GZZ8 138 aa15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 MACROD2A1Z1Q3 448 aa15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 GMNCA6NCL1 334 aa15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 ONECUT3O60422 494 aaPredicted RBP15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 ANP32DO95626 131 aa15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 GPSM2P81274 684 aa15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 OXER1Q8TDS5 423 aa15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 ATP6V1G3Q96LB4 118 aa15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 PLCD4Q9BRC7 762 aa15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 MCM9Q9NXL9 1143 aa15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 LEMD3Q9Y2U8 911 aa15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 DUSP10Q9Y6W6 482 aa15.49■□□□□ 0.07
GTF3C1-203ENST00000562609 SMNDC1O75940 238 aaKnown RBP eCLIP15.48■□□□□ 0.07
GTF3C1-203ENST00000562609 PLEKHA8P1O95397 391 aa15.48■□□□□ 0.07
GTF3C1-203ENST00000562609 PPP1R7Q15435 360 aa15.48■□□□□ 0.07
GTF3C1-203ENST00000562609 IFIT1BQ5T764 474 aaKnown RBP15.48■□□□□ 0.07
GTF3C1-203ENST00000562609 DIS3L2Q8IYB7 885 aaKnown RBP15.48■□□□□ 0.07
GTF3C1-203ENST00000562609 CRACR2BQ8N4Y2 399 aaPredicted RBP15.48■□□□□ 0.07
GTF3C1-203ENST00000562609 C3orf20Q8ND61 904 aa15.48■□□□□ 0.07
GTF3C1-203ENST00000562609 SEC16BQ96JE7 1060 aa15.48■□□□□ 0.07
GTF3C1-203ENST00000562609 BRIP1Q9BX63 1249 aa15.48■□□□□ 0.07
GTF3C1-203ENST00000562609 TAB2Q9NYJ8 693 aa15.48■□□□□ 0.07
GTF3C1-203ENST00000562609 MTMR7Q9Y216 660 aa15.48■□□□□ 0.07
GTF3C1-203ENST00000562609 L3MBTL1Q9Y468 752 aa15.48■□□□□ 0.07
GTF3C1-203ENST00000562609 ANO9A1A5B4 782 aa15.48■□□□□ 0.07
GTF3C1-203ENST00000562609 RCCD1A6NED2 376 aa15.48■□□□□ 0.07
GTF3C1-203ENST00000562609 BACH1O14867 736 aa15.48■□□□□ 0.07
GTF3C1-203ENST00000562609 CASP1P29466 404 aa15.48■□□□□ 0.07
GTF3C1-203ENST00000562609 ITGB3BPQ13352 177 aaPredicted RBP15.48■□□□□ 0.07
GTF3C1-203ENST00000562609 TRIM22Q8IYM9 498 aa15.48■□□□□ 0.07
GTF3C1-203ENST00000562609 RUBCNQ92622 972 aa15.48■□□□□ 0.07
GTF3C1-203ENST00000562609 HVCN1Q96D96 273 aa15.48■□□□□ 0.07
GTF3C1-203ENST00000562609 COL24A1Q17RW2 1714 aa15.47■□□□□ 0.07
GTF3C1-203ENST00000562609 SEMA3EO15041 775 aa15.47■□□□□ 0.07
GTF3C1-203ENST00000562609 UFL1O94874 794 aa15.47■□□□□ 0.07
GTF3C1-203ENST00000562609 AFMP43652 599 aa15.47■□□□□ 0.07
GTF3C1-203ENST00000562609 VAV2P52735 878 aa15.47■□□□□ 0.07
GTF3C1-203ENST00000562609 TRIM14Q14142 442 aa15.47■□□□□ 0.07
GTF3C1-203ENST00000562609 PPP4R3AQ6IN85 833 aa15.47■□□□□ 0.07
GTF3C1-203ENST00000562609 DYNLL2Q96FJ2 89 aa15.47■□□□□ 0.07
GTF3C1-203ENST00000562609 CRNKL1Q9BZJ0 848 aaKnown RBP15.47■□□□□ 0.07
GTF3C1-203ENST00000562609 SMARCAL1Q9NZC9 954 aa15.47■□□□□ 0.07
GTF3C1-203ENST00000562609 ANAPC4Q9UJX5 808 aa15.47■□□□□ 0.07
GTF3C1-203ENST00000562609 IRS2Q9Y4H2 1338 aa15.47■□□□□ 0.07
GTF3C1-203ENST00000562609 LY75O60449 1722 aa15.47■□□□□ 0.07
GTF3C1-203ENST00000562609 ACTN4O43707 911 aaKnown RBP15.47■□□□□ 0.07
GTF3C1-203ENST00000562609 FAM153BP0C7A2 387 aa15.47■□□□□ 0.07
GTF3C1-203ENST00000562609 PRPHP41219 470 aa15.47■□□□□ 0.07
GTF3C1-203ENST00000562609 FAM153CQ494X1 144 aa15.47■□□□□ 0.07
GTF3C1-203ENST00000562609 LACTB2Q53H82 288 aaPredicted RBP15.47■□□□□ 0.07
GTF3C1-203ENST00000562609 HAUS3Q68CZ6 603 aa15.47■□□□□ 0.07
GTF3C1-203ENST00000562609 CACNA2D3Q8IZS8 1091 aa15.47■□□□□ 0.07
GTF3C1-203ENST00000562609 PROM2Q8N271 834 aa15.47■□□□□ 0.07
GTF3C1-203ENST00000562609 SPATA20Q8TB22 786 aa15.47■□□□□ 0.07
GTF3C1-203ENST00000562609 SHISA4Q96DD7 197 aa15.47■□□□□ 0.07
GTF3C1-203ENST00000562609 VPS54Q9P1Q0 977 aa15.47■□□□□ 0.07
GTF3C1-203ENST00000562609 FAM153AQ9UHL3 310 aa15.47■□□□□ 0.07
GTF3C1-203ENST00000562609 TTC26A0AVF1 554 aa15.46■□□□□ 0.07
GTF3C1-203ENST00000562609 FAM205CA6NFA0 338 aa15.46■□□□□ 0.07
GTF3C1-203ENST00000562609 SRRM3A6NNA2 597 aaPredicted RBP15.46■□□□□ 0.07
GTF3C1-203ENST00000562609 RGL2O15211 777 aa15.46■□□□□ 0.07
GTF3C1-203ENST00000562609 LDHBP07195 334 aaKnown RBP15.46■□□□□ 0.07
GTF3C1-203ENST00000562609 KRT83P78385 493 aa15.46■□□□□ 0.07
GTF3C1-203ENST00000562609 GLE1Q53GS7 698 aaKnown RBP15.46■□□□□ 0.07
GTF3C1-203ENST00000562609 SH3RF3Q8TEJ3 882 aaPredicted RBP15.46■□□□□ 0.07
GTF3C1-203ENST00000562609 TCP11Q8WWU5 503 aa15.46■□□□□ 0.07
GTF3C1-203ENST00000562609 SNX12Q9UMY4 172 aa15.46■□□□□ 0.07
GTF3C1-203ENST00000562609 V9GY48 417 aaPredicted RBP15.46■□□□□ 0.07
GTF3C1-203ENST00000562609 ECM29Q5VYK3 1845 aa15.46■□□□□ 0.07
GTF3C1-203ENST00000562609 TIAM2Q8IVF5 1701 aa15.46■□□□□ 0.07
GTF3C1-203ENST00000562609 DNAJC8O75937 253 aaPredicted RBP15.46■□□□□ 0.07
GTF3C1-203ENST00000562609 COPB1P53618 953 aaKnown RBP15.46■□□□□ 0.07
GTF3C1-203ENST00000562609 SLC5A9Q2M3M2 681 aa15.46■□□□□ 0.07
GTF3C1-203ENST00000562609 KANK3Q6NY19 840 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms