RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 ZNF865P0CJ78 1059 aaPredicted RBP24.47■■□□□ 1.51
NEK3-202ENST00000550841 PDIA4P13667 645 aaKnown RBP24.47■■□□□ 1.51
NEK3-202ENST00000550841 EN2P19622 333 aaPredicted RBP24.47■■□□□ 1.51
NEK3-202ENST00000550841 GUCY1B3Q02153 619 aa24.47■■□□□ 1.51
NEK3-202ENST00000550841 NONOQ15233 471 aaKnown RBP eCLIP24.47■■□□□ 1.51
NEK3-202ENST00000550841 KCNV1Q6PIU1 500 aa24.47■■□□□ 1.51
NEK3-202ENST00000550841 EEPD1Q7L9B9 569 aa24.47■■□□□ 1.51
NEK3-202ENST00000550841 DIS3L2Q8IYB7 885 aaKnown RBP24.47■■□□□ 1.51
NEK3-202ENST00000550841 RASGRP4Q8TDF6 673 aa24.47■■□□□ 1.51
NEK3-202ENST00000550841 MCM3APO60318 1980 aa24.47■■□□□ 1.51
NEK3-202ENST00000550841 SEPT4O43236 478 aa24.46■■□□□ 1.51
NEK3-202ENST00000550841 CCL5P13501 91 aa24.46■■□□□ 1.51
NEK3-202ENST00000550841 AKR1A1P14550 325 aa24.46■■□□□ 1.51
NEK3-202ENST00000550841 USP11P51784 963 aa24.46■■□□□ 1.51
NEK3-202ENST00000550841 GNL2Q13823 731 aaKnown RBP24.46■■□□□ 1.51
NEK3-202ENST00000550841 GNPTABQ3T906 1256 aa24.46■■□□□ 1.51
NEK3-202ENST00000550841 NLRX1Q86UT6 975 aa24.46■■□□□ 1.51
NEK3-202ENST00000550841 PGBD1Q96JS3 809 aa24.46■■□□□ 1.51
NEK3-202ENST00000550841 KATNBL1Q9H079 304 aa24.46■■□□□ 1.51
NEK3-202ENST00000550841 RNF208Q9H0X6 261 aa24.46■■□□□ 1.51
NEK3-202ENST00000550841 FOXP1Q9H334 677 aaPredicted RBP24.46■■□□□ 1.51
NEK3-202ENST00000550841 FOXD4L1Q9NU39 408 aa24.46■■□□□ 1.51
NEK3-202ENST00000550841 RBM47A0AV96 593 aaKnown RBP24.45■■□□□ 1.5
NEK3-202ENST00000550841 BTBD18B2RXH4 712 aa24.45■■□□□ 1.5
NEK3-202ENST00000550841 ADAMTS3O15072 1205 aa24.45■■□□□ 1.5
NEK3-202ENST00000550841 CYP3A4P08684 503 aa24.45■■□□□ 1.5
NEK3-202ENST00000550841 CAPN2P17655 700 aa24.45■■□□□ 1.5
NEK3-202ENST00000550841 ZNF76P36508 570 aa24.45■■□□□ 1.5
NEK3-202ENST00000550841 ARHGAP4P98171 946 aa24.45■■□□□ 1.5
NEK3-202ENST00000550841 TAPT1Q6NXT6 567 aa24.45■■□□□ 1.5
NEK3-202ENST00000550841 FBXO16Q8IX29 292 aaPredicted RBP24.45■■□□□ 1.5
NEK3-202ENST00000550841 TRPV1Q8NER1 839 aa24.45■■□□□ 1.5
NEK3-202ENST00000550841 IL31RAQ8NI17 732 aa24.45■■□□□ 1.5
NEK3-202ENST00000550841 SCFD2Q8WU76 684 aa24.45■■□□□ 1.5
NEK3-202ENST00000550841 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.45■■□□□ 1.51e-5■■■□□ 18
NEK3-202ENST00000550841 UNC93B1Q9H1C4 597 aa24.45■■□□□ 1.5
NEK3-202ENST00000550841 TGFB3P10600 412 aa24.44■■□□□ 1.5
NEK3-202ENST00000550841 CCND3P30281 292 aaPredicted RBP24.44■■□□□ 1.5
NEK3-202ENST00000550841 ANP32AP39687 249 aaKnown RBP24.44■■□□□ 1.5
NEK3-202ENST00000550841 MRPS9P82933 396 aaKnown RBP24.44■■□□□ 1.5
NEK3-202ENST00000550841 TTLL4Q14679 1199 aa24.44■■□□□ 1.5
NEK3-202ENST00000550841 MTFR1Q15390 333 aa24.44■■□□□ 1.5
NEK3-202ENST00000550841 CCDC144BQ3MJ40 725 aa24.44■■□□□ 1.5
NEK3-202ENST00000550841 SEPT14Q6ZU15 432 aa24.44■■□□□ 1.5
NEK3-202ENST00000550841 OXER1Q8TDS5 423 aa24.44■■□□□ 1.5
NEK3-202ENST00000550841 CDHR1Q96JP9 859 aa24.44■■□□□ 1.5
NEK3-202ENST00000550841 DDX49Q9Y6V7 483 aaKnown RBP24.44■■□□□ 1.5
NEK3-202ENST00000550841 MAFGO15525 162 aa24.43■■□□□ 1.5
NEK3-202ENST00000550841 TBCKQ8TEA7 893 aa24.43■■□□□ 1.5
NEK3-202ENST00000550841 NAP1L4Q99733 375 aaKnown RBP24.43■■□□□ 1.5
NEK3-202ENST00000550841 WDR11Q9BZH6 1224 aa24.43■■□□□ 1.5
NEK3-202ENST00000550841 RTEL1Q9NZ71 1219 aa24.43■■□□□ 1.5
NEK3-202ENST00000550841 DDX20Q9UHI6 824 aaKnown RBP24.43■■□□□ 1.5
NEK3-202ENST00000550841 NKRFO15226 690 aaKnown RBP eCLIP24.42■■□□□ 1.5
NEK3-202ENST00000550841 MYCP01106 439 aaPredicted RBP24.42■■□□□ 1.5
NEK3-202ENST00000550841 TNFAIP2Q03169 654 aa24.42■■□□□ 1.5
NEK3-202ENST00000550841 NR5A1Q13285 461 aa24.42■■□□□ 1.5
NEK3-202ENST00000550841 PIK3AP1Q6ZUJ8 805 aa24.42■■□□□ 1.5
NEK3-202ENST00000550841 CRYGNQ8WXF5 182 aa24.42■■□□□ 1.5
NEK3-202ENST00000550841 GPRASP2Q96D09 838 aa24.42■■□□□ 1.5
NEK3-202ENST00000550841 INPP4AQ96PE3 977 aaPredicted RBP24.42■■□□□ 1.5
NEK3-202ENST00000550841 MXRA8Q9BRK3 442 aa24.42■■□□□ 1.5
NEK3-202ENST00000550841 PAK6Q9NQU5 681 aaPredicted RBP24.42■■□□□ 1.5
NEK3-202ENST00000550841 PDGFCQ9NRA1 345 aa24.42■■□□□ 1.5
NEK3-202ENST00000550841 UBIAD1Q9Y5Z9 338 aa24.42■■□□□ 1.5
NEK3-202ENST00000550841 GJB1P08034 283 aa24.41■■□□□ 1.5
NEK3-202ENST00000550841 RARBP10826 455 aa24.41■■□□□ 1.5
NEK3-202ENST00000550841 ICAM3P32942 547 aa24.41■■□□□ 1.5
NEK3-202ENST00000550841 CEP55Q53EZ4 464 aa24.41■■□□□ 1.5
NEK3-202ENST00000550841 NIPA1Q7RTP0 329 aa24.41■■□□□ 1.5
NEK3-202ENST00000550841 TNFRSF25Q93038 417 aa24.41■■□□□ 1.5
NEK3-202ENST00000550841 JADE2Q9NQC1 790 aa24.41■■□□□ 1.5
NEK3-202ENST00000550841 Q9Y3F1 56 aa24.41■■□□□ 1.5
NEK3-202ENST00000550841 MRVI1Q9Y6F6 885 aa24.41■■□□□ 1.5
NEK3-202ENST00000550841 FIBPO43427 364 aa24.4■■□□□ 1.5
NEK3-202ENST00000550841 DUSP11O75319 330 aaKnown RBP24.4■■□□□ 1.5
NEK3-202ENST00000550841 TXNP10599 105 aaKnown RBP24.4■■□□□ 1.5
NEK3-202ENST00000550841 U2AF2P26368 475 aaKnown RBP eCLIP24.4■■□□□ 1.51e-10■■■□□ 14.7
NEK3-202ENST00000550841 CIITAP33076 1130 aa24.4■■□□□ 1.5
NEK3-202ENST00000550841 ADCYAP1R1P41586 468 aa24.4■■□□□ 1.5
NEK3-202ENST00000550841 INF2Q27J81 1249 aa24.4■■□□□ 1.5
NEK3-202ENST00000550841 DUSP28Q4G0W2 176 aa24.4■■□□□ 1.5
NEK3-202ENST00000550841 MCTP1Q6DN14 999 aa24.4■■□□□ 1.5
NEK3-202ENST00000550841 NEK8Q86SG6 692 aa24.4■■□□□ 1.5
NEK3-202ENST00000550841 DAXXQ9UER7 740 aaPredicted RBP24.4■■□□□ 1.5
NEK3-202ENST00000550841 SPATA31C2B4DYI2 1134 aa24.39■■□□□ 1.49
NEK3-202ENST00000550841 MEIS1O00470 390 aa24.39■■□□□ 1.49
NEK3-202ENST00000550841 RGS20O76081 388 aa24.39■■□□□ 1.49
NEK3-202ENST00000550841 SYT1P21579 422 aa24.39■■□□□ 1.49
NEK3-202ENST00000550841 MOXD1Q6UVY6 613 aa24.39■■□□□ 1.49
NEK3-202ENST00000550841 NOSTRINQ8IVI9 506 aa24.39■■□□□ 1.49
NEK3-202ENST00000550841 SPRYD3Q8NCJ5 442 aa24.39■■□□□ 1.49
NEK3-202ENST00000550841 ZFP91Q96JP5 570 aaPredicted RBP24.39■■□□□ 1.49
NEK3-202ENST00000550841 DEFB118Q96PH6 123 aa24.39■■□□□ 1.49
NEK3-202ENST00000550841 SPC25Q9HBM1 224 aa24.39■■□□□ 1.49
NEK3-202ENST00000550841 KIAA1217Q5T5P2 1943 aa24.38■■□□□ 1.49
NEK3-202ENST00000550841 GCFC2P16383 781 aaKnown RBP24.38■■□□□ 1.49
NEK3-202ENST00000550841 SMPD1P17405 629 aa24.38■■□□□ 1.49
NEK3-202ENST00000550841 ITGB5P18084 799 aa24.38■■□□□ 1.49
NEK3-202ENST00000550841 MTMR1Q13613 665 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms