RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 CALML4Q96GE6 196 aa10.5□□□□□ -0.73
GNE-206ENST00000543356 MTRQ99707 1265 aa10.5□□□□□ -0.73
GNE-206ENST00000543356 CTDP1Q9Y5B0 961 aaPredicted RBP10.5□□□□□ -0.73
GNE-206ENST00000543356 RPTORQ8N122 1335 aa10.5□□□□□ -0.73
GNE-206ENST00000543356 POTECB2RU33 542 aa10.5□□□□□ -0.73
GNE-206ENST00000543356 SOCS7O14512 581 aa10.5□□□□□ -0.73
GNE-206ENST00000543356 ADCY5O95622 1261 aa10.5□□□□□ -0.73
GNE-206ENST00000543356 PLCG1P19174 1290 aa10.5□□□□□ -0.73
GNE-206ENST00000543356 BMP6P22004 513 aa10.5□□□□□ -0.73
GNE-206ENST00000543356 SEMA3FQ13275 785 aa10.5□□□□□ -0.73
GNE-206ENST00000543356 SARM1Q6SZW1 724 aa10.5□□□□□ -0.73
GNE-206ENST00000543356 FCHSD1Q86WN1 690 aa10.5□□□□□ -0.73
GNE-206ENST00000543356 ANKRD13AQ8IZ07 590 aa10.5□□□□□ -0.73
GNE-206ENST00000543356 TBC1D5Q92609 795 aa10.5□□□□□ -0.73
GNE-206ENST00000543356 ATG4CQ96DT6 458 aa10.5□□□□□ -0.73
GNE-206ENST00000543356 RAVER2Q9HCJ3 691 aaKnown RBP10.5□□□□□ -0.73
GNE-206ENST00000543356 KBTBD4Q9NVX7 518 aa10.5□□□□□ -0.73
GNE-206ENST00000543356 STK17AQ9UEE5 414 aa10.5□□□□□ -0.73
GNE-206ENST00000543356 FRMPD4Q14CM0 1322 aa10.5□□□□□ -0.73
GNE-206ENST00000543356 SMTNL1A8MU46 457 aa10.49□□□□□ -0.73
GNE-206ENST00000543356 FAM86B1E9PN63 330 aa10.49□□□□□ -0.73
GNE-206ENST00000543356 ATP2A1O14983 1001 aa10.49□□□□□ -0.73
GNE-206ENST00000543356 AP5Z1O43299 807 aa10.49□□□□□ -0.73
GNE-206ENST00000543356 MARCH6O60337 910 aa10.49□□□□□ -0.73
GNE-206ENST00000543356 FAM86B2P0C5J1 330 aa10.49□□□□□ -0.73
GNE-206ENST00000543356 PPATQ06203 517 aa10.49□□□□□ -0.73
GNE-206ENST00000543356 COG2Q14746 738 aa10.49□□□□□ -0.73
GNE-206ENST00000543356 SECISBP2LQ93073 1101 aaKnown RBP10.49□□□□□ -0.73
GNE-206ENST00000543356 FAM20AQ96MK3 541 aa10.49□□□□□ -0.73
GNE-206ENST00000543356 MAF1Q9H063 256 aa10.49□□□□□ -0.73
GNE-206ENST00000543356 RMND1Q9NWS8 449 aa10.49□□□□□ -0.73
GNE-206ENST00000543356 PCDHA12Q9UN75 941 aa10.49□□□□□ -0.73
GNE-206ENST00000543356 IGLV3-22A0A075B6J6 115 aa10.49□□□□□ -0.73
GNE-206ENST00000543356 POTEMA6NI47 508 aa10.49□□□□□ -0.73
GNE-206ENST00000543356 NFIBO00712 420 aa10.49□□□□□ -0.73
GNE-206ENST00000543356 ALAS1P13196 640 aa10.49□□□□□ -0.73
GNE-206ENST00000543356 GRB10Q13322 594 aa10.49□□□□□ -0.73
GNE-206ENST00000543356 TMEM119Q4V9L6 283 aa10.49□□□□□ -0.73
GNE-206ENST00000543356 PRR16Q569H4 304 aa10.49□□□□□ -0.73
GNE-206ENST00000543356 HYIQ5T013 277 aa10.49□□□□□ -0.73
GNE-206ENST00000543356 KRT79Q5XKE5 535 aa10.49□□□□□ -0.73
GNE-206ENST00000543356 ISM2Q6H9L7 571 aa10.49□□□□□ -0.73
GNE-206ENST00000543356 LRRC15Q8TF66 581 aa10.49□□□□□ -0.73
GNE-206ENST00000543356 PNMA5Q96PV4 448 aa10.49□□□□□ -0.73
GNE-206ENST00000543356 STK24Q9Y6E0 443 aa10.49□□□□□ -0.73
GNE-206ENST00000543356 KDM3AQ9Y4C1 1321 aa10.49□□□□□ -0.73
GNE-206ENST00000543356 SPDYE5A6NIY4 337 aa10.48□□□□□ -0.73
GNE-206ENST00000543356 TPM4P67936 248 aa10.48□□□□□ -0.73
GNE-206ENST00000543356 CUL4BQ13620 913 aa10.48□□□□□ -0.73
GNE-206ENST00000543356 NCAPHQ15003 741 aa10.48□□□□□ -0.73
GNE-206ENST00000543356 ERO1BQ86YB8 467 aa10.48□□□□□ -0.73
GNE-206ENST00000543356 CPXCR1Q8N123 301 aa10.48□□□□□ -0.73
GNE-206ENST00000543356 SNX29Q8TEQ0 813 aa10.48□□□□□ -0.73
GNE-206ENST00000543356 A0A0G2JLL6 359 aaPredicted RBP10.48□□□□□ -0.73
GNE-206ENST00000543356 ZNF76P36508 570 aa10.48□□□□□ -0.73
GNE-206ENST00000543356 SETQ01105 290 aaPredicted RBP10.48□□□□□ -0.73
GNE-206ENST00000543356 MYL5Q02045 173 aa10.48□□□□□ -0.73
GNE-206ENST00000543356 SPIRE1Q08AE8 756 aa10.48□□□□□ -0.73
GNE-206ENST00000543356 TKFCQ3LXA3 575 aa10.48□□□□□ -0.73
GNE-206ENST00000543356 HS1BP3Q53T59 392 aa10.48□□□□□ -0.73
GNE-206ENST00000543356 EAPPQ56P03 285 aaPredicted RBP10.48□□□□□ -0.73
GNE-206ENST00000543356 MUM1L1Q5H9M0 696 aa10.48□□□□□ -0.73
GNE-206ENST00000543356 PRRT2Q7Z6L0 340 aaPredicted RBP10.48□□□□□ -0.73
GNE-206ENST00000543356 PLA2G4DQ86XP0 818 aa10.48□□□□□ -0.73
GNE-206ENST00000543356 PROCA1Q8NCQ7 364 aaPredicted RBP10.48□□□□□ -0.73
GNE-206ENST00000543356 WNK4Q96J92 1243 aa10.48□□□□□ -0.73
GNE-206ENST00000543356 CDK5RAP3Q96JB5 506 aa10.48□□□□□ -0.73
GNE-206ENST00000543356 ELP3Q9H9T3 547 aa10.48□□□□□ -0.73
GNE-206ENST00000543356 CXCL11O14625 94 aa10.47□□□□□ -0.73
GNE-206ENST00000543356 MSH4O15457 936 aa10.47□□□□□ -0.73
GNE-206ENST00000543356 RPN1P04843 607 aaKnown RBP10.47□□□□□ -0.73
GNE-206ENST00000543356 ZSCAN20P17040 1043 aaPredicted RBP10.47□□□□□ -0.73
GNE-206ENST00000543356 CASP1P29466 404 aa10.47□□□□□ -0.73
GNE-206ENST00000543356 PPIL2Q13356 520 aa10.47□□□□□ -0.73
GNE-206ENST00000543356 KCNB1Q14721 858 aa10.47□□□□□ -0.73
GNE-206ENST00000543356 ARMC9Q7Z3E5 817 aa10.47□□□□□ -0.73
GNE-206ENST00000543356 SYTL5Q8TDW5 730 aaPredicted RBP10.47□□□□□ -0.73
GNE-206ENST00000543356 STAMQ92783 540 aa10.47□□□□□ -0.73
GNE-206ENST00000543356 TRIM44Q96DX7 344 aaPredicted RBP10.47□□□□□ -0.73
GNE-206ENST00000543356 TRERF1Q96PN7 1200 aa10.47□□□□□ -0.73
GNE-206ENST00000543356 C7orf25Q9BPX7 421 aa10.47□□□□□ -0.73
GNE-206ENST00000543356 NT5C3AQ9H0P0 336 aa10.47□□□□□ -0.73
GNE-206ENST00000543356 BLZF1Q9H2G9 400 aa10.47□□□□□ -0.73
GNE-206ENST00000543356 HOXC10Q9NYD6 342 aa10.47□□□□□ -0.73
GNE-206ENST00000543356 COL20A1Q9P218 1284 aa10.47□□□□□ -0.73
GNE-206ENST00000543356 ZNF214Q9UL59 606 aaPredicted RBP10.47□□□□□ -0.73
GNE-206ENST00000543356 UNCXA6NJT0 531 aa10.47□□□□□ -0.73
GNE-206ENST00000543356 SPDYE16A6NNV3 312 aaPredicted RBP10.47□□□□□ -0.73
GNE-206ENST00000543356 ERCC5P28715 1186 aaPredicted RBP10.47□□□□□ -0.73
GNE-206ENST00000543356 ZNF75DP51815 510 aa10.47□□□□□ -0.73
GNE-206ENST00000543356 AMPD3Q01432 767 aa10.47□□□□□ -0.73
GNE-206ENST00000543356 CEP55Q53EZ4 464 aa10.47□□□□□ -0.73
GNE-206ENST00000543356 NIPA1Q7RTP0 329 aa10.47□□□□□ -0.73
GNE-206ENST00000543356 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.47□□□□□ -0.73
GNE-206ENST00000543356 PLIN2Q99541 437 aa10.47□□□□□ -0.73
GNE-206ENST00000543356 RNF146Q9NTX7 359 aa10.47□□□□□ -0.73
GNE-206ENST00000543356 BLOC1S4Q9NUP1 217 aa10.47□□□□□ -0.73
GNE-206ENST00000543356 VAV3Q9UKW4 847 aa10.47□□□□□ -0.73
GNE-206ENST00000543356 KCNH4Q9UQ05 1017 aa10.47□□□□□ -0.73
GNE-206ENST00000543356 CHRM1P11229 460 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms