RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 IQCA1Q86XH1 822 aa24.93■■□□□ 1.58
SSH3-211ENST00000534112 MCF2L2Q86YR7 1114 aa24.93■■□□□ 1.58
SSH3-211ENST00000534112 ANKS1AQ92625 1134 aa24.93■■□□□ 1.58
SSH3-211ENST00000534112 RMDN3Q96TC7 470 aa24.93■■□□□ 1.58
SSH3-211ENST00000534112 LNPKQ9C0E8 428 aa24.93■■□□□ 1.58
SSH3-211ENST00000534112 COG5Q9UP83 839 aa24.93■■□□□ 1.58
SSH3-211ENST00000534112 KDM4AO75164 1064 aa24.92■■□□□ 1.58
SSH3-211ENST00000534112 NT5C2P49902 561 aa24.92■■□□□ 1.58
SSH3-211ENST00000534112 WDR5P61964 334 aaKnown RBP24.92■■□□□ 1.58
SSH3-211ENST00000534112 GRB10Q13322 594 aa24.92■■□□□ 1.58
SSH3-211ENST00000534112 DHX38Q92620 1227 aaKnown RBP24.92■■□□□ 1.58
SSH3-211ENST00000534112 KAT14Q9H8E8 782 aa24.92■■□□□ 1.58
SSH3-211ENST00000534112 TET1Q8NFU7 2136 aa24.91■■□□□ 1.58
SSH3-211ENST00000534112 DGKDQ16760 1214 aa24.91■■□□□ 1.58
SSH3-211ENST00000534112 QRICH1Q2TAL8 776 aa24.91■■□□□ 1.58
SSH3-211ENST00000534112 LRRC8DQ7L1W4 858 aa24.91■■□□□ 1.58
SSH3-211ENST00000534112 SPRED2Q7Z698 418 aa24.91■■□□□ 1.58
SSH3-211ENST00000534112 DDX41Q9UJV9 622 aaKnown RBP24.91■■□□□ 1.58
SSH3-211ENST00000534112 MRPL11Q9Y3B7 192 aaKnown RBP24.91■■□□□ 1.58
SSH3-211ENST00000534112 LPXNO60711 386 aa24.9■■□□□ 1.58
SSH3-211ENST00000534112 RBL2Q08999 1139 aa24.9■■□□□ 1.58
SSH3-211ENST00000534112 ASPRV1Q53RT3 343 aa24.9■■□□□ 1.58
SSH3-211ENST00000534112 ARHGEF16Q5VV41 709 aa24.9■■□□□ 1.58
SSH3-211ENST00000534112 TMCO2Q7Z6W1 182 aaPredicted RBP24.9■■□□□ 1.58
SSH3-211ENST00000534112 ZSCAN10Q96SZ4 725 aaPredicted RBP24.9■■□□□ 1.58
SSH3-211ENST00000534112 HDAC6Q9UBN7 1215 aa24.9■■□□□ 1.58
SSH3-211ENST00000534112 GTF2IRD1Q9UHL9 959 aa24.9■■□□□ 1.58
SSH3-211ENST00000534112 TCF20Q9UGU0 1960 aaKnown RBP24.89■■□□□ 1.58
SSH3-211ENST00000534112 LCHNA4D1U4 455 aa24.89■■□□□ 1.58
SSH3-211ENST00000534112 EIF3JO75822 258 aaKnown RBP24.89■■□□□ 1.58
SSH3-211ENST00000534112 PARNO95453 639 aaKnown RBP24.89■■□□□ 1.58
SSH3-211ENST00000534112 CXCL10P02778 98 aa24.89■■□□□ 1.58
SSH3-211ENST00000534112 CKBP12277 381 aa24.89■■□□□ 1.58
SSH3-211ENST00000534112 EIF2AK2P19525 551 aaKnown RBP24.89■■□□□ 1.58
SSH3-211ENST00000534112 FBXO11Q86XK2 927 aa24.89■■□□□ 1.58
SSH3-211ENST00000534112 C7orf31Q8N865 590 aa24.89■■□□□ 1.58
SSH3-211ENST00000534112 ENAHQ8N8S7 591 aaPredicted RBP24.89■■□□□ 1.58
SSH3-211ENST00000534112 EMID1Q96A84 441 aaPredicted RBP24.89■■□□□ 1.58
SSH3-211ENST00000534112 ZBED2Q9BTP6 218 aa24.89■■□□□ 1.58
SSH3-211ENST00000534112 C1QTNF1Q9BXJ1 281 aa24.89■■□□□ 1.58
SSH3-211ENST00000534112 VAT1LQ9HCJ6 419 aa24.89■■□□□ 1.58
SSH3-211ENST00000534112 B4E1Z4 1266 aa24.88■■□□□ 1.57
SSH3-211ENST00000534112 NBNO60934 754 aa24.88■■□□□ 1.57
SSH3-211ENST00000534112 PSEN2P49810 448 aa24.88■■□□□ 1.57
SSH3-211ENST00000534112 DEFB103AP81534 67 aa24.88■■□□□ 1.57
SSH3-211ENST00000534112 CNKSR3Q6P9H4 555 aa24.88■■□□□ 1.57
SSH3-211ENST00000534112 HLA-CQ95604 372 aa24.88■■□□□ 1.57
SSH3-211ENST00000534112 JMJD4Q9H9V9 463 aa24.88■■□□□ 1.57
SSH3-211ENST00000534112 ZSWIM5Q9P217 1185 aa24.88■■□□□ 1.57
SSH3-211ENST00000534112 DHX16O60231 1041 aaKnown RBP24.87■■□□□ 1.57
SSH3-211ENST00000534112 NR3C2P08235 984 aa24.87■■□□□ 1.57
SSH3-211ENST00000534112 PARP1P09874 1014 aaKnown RBP24.87■■□□□ 1.57
SSH3-211ENST00000534112 LAMC2Q13753 1193 aa24.87■■□□□ 1.57
SSH3-211ENST00000534112 CWC27Q6UX04 472 aaKnown RBP24.87■■□□□ 1.57
SSH3-211ENST00000534112 PPTC7Q8NI37 304 aa24.87■■□□□ 1.57
SSH3-211ENST00000534112 ALG1Q9BT22 464 aa24.87■■□□□ 1.57
SSH3-211ENST00000534112 KATNAL1Q9BW62 490 aa24.87■■□□□ 1.57
SSH3-211ENST00000534112 PXMP2Q9NR77 195 aa24.87■■□□□ 1.57
SSH3-211ENST00000534112 MRVI1Q9Y6F6 885 aa24.87■■□□□ 1.57
SSH3-211ENST00000534112 ABHD14A-ACY1A0A1B0GW23 586 aa24.86■■□□□ 1.57
SSH3-211ENST00000534112 CFBP00751 764 aa24.86■■□□□ 1.57
SSH3-211ENST00000534112 MFSD10Q14728 455 aa24.86■■□□□ 1.57
SSH3-211ENST00000534112 TCTN1Q2MV58 587 aa24.86■■□□□ 1.57
SSH3-211ENST00000534112 TANC1Q9C0D5 1861 aa24.85■■□□□ 1.57
SSH3-211ENST00000534112 HAS3O00219 553 aa24.85■■□□□ 1.57
SSH3-211ENST00000534112 GJB5O95377 273 aa24.85■■□□□ 1.57
SSH3-211ENST00000534112 F2P00734 622 aa24.85■■□□□ 1.57
SSH3-211ENST00000534112 PTK7Q13308 1070 aa24.85■■□□□ 1.57
SSH3-211ENST00000534112 KIAA0753Q2KHM9 967 aa24.85■■□□□ 1.57
SSH3-211ENST00000534112 B4GALNT3Q6L9W6 998 aa24.85■■□□□ 1.57
SSH3-211ENST00000534112 PLEKHM2Q8IWE5 1019 aa24.85■■□□□ 1.57
SSH3-211ENST00000534112 SMC5Q8IY18 1101 aa24.85■■□□□ 1.57
SSH3-211ENST00000534112 DHX37Q8IY37 1157 aaKnown RBP24.85■■□□□ 1.57
SSH3-211ENST00000534112 RAD9AQ99638 391 aa24.85■■□□□ 1.57
SSH3-211ENST00000534112 LMCD1Q9NZU5 365 aa24.85■■□□□ 1.57
SSH3-211ENST00000534112 TRIP12Q14669 1992 aaPredicted RBP24.84■■□□□ 1.57
SSH3-211ENST00000534112 OPLAHO14841 1288 aa24.84■■□□□ 1.57
SSH3-211ENST00000534112 ZNF286BP0CG31 522 aa24.84■■□□□ 1.57
SSH3-211ENST00000534112 HSD17B4P51659 736 aa24.84■■□□□ 1.57
SSH3-211ENST00000534112 TRIM71Q2Q1W2 868 aaKnown RBP24.84■■□□□ 1.57
SSH3-211ENST00000534112 TRAF7Q6Q0C0 670 aa24.84■■□□□ 1.57
SSH3-211ENST00000534112 GDPD5Q8WTR4 605 aa24.84■■□□□ 1.57
SSH3-211ENST00000534112 AMNQ9BXJ7 453 aa24.84■■□□□ 1.57
SSH3-211ENST00000534112 OSBPL3Q9H4L5 887 aa24.84■■□□□ 1.57
SSH3-211ENST00000534112 DIAPH3Q9NSV4 1193 aa24.84■■□□□ 1.57
SSH3-211ENST00000534112 ZNF200P98182 395 aaPredicted RBP24.83■■□□□ 1.57
SSH3-211ENST00000534112 IKBKEQ14164 716 aa24.83■■□□□ 1.57
SSH3-211ENST00000534112 IMMTQ16891 758 aaKnown RBP24.83■■□□□ 1.57
SSH3-211ENST00000534112 ZNF618Q5T7W0 954 aa24.83■■□□□ 1.57
SSH3-211ENST00000534112 STAG2Q8N3U4 1231 aa24.83■■□□□ 1.57
SSH3-211ENST00000534112 WNT8BQ93098 351 aa24.83■■□□□ 1.57
SSH3-211ENST00000534112 DSCC1Q9BVC3 393 aa24.83■■□□□ 1.57
SSH3-211ENST00000534112 SUGCTQ9HAC7 445 aa24.83■■□□□ 1.57
SSH3-211ENST00000534112 RBAK-RBAKDNI3L0D1 243 aa24.82■■□□□ 1.56
SSH3-211ENST00000534112 EFCAB14O75071 495 aa24.82■■□□□ 1.56
SSH3-211ENST00000534112 PPFIA4O75335 1185 aa24.82■■□□□ 1.56
SSH3-211ENST00000534112 RGS20O76081 388 aa24.82■■□□□ 1.56
SSH3-211ENST00000534112 HOXD8P13378 290 aaPredicted RBP24.82■■□□□ 1.56
SSH3-211ENST00000534112 ERVK-21P61565 698 aa24.82■■□□□ 1.56
SSH3-211ENST00000534112 GHRHRQ02643 423 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms