RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 RGS20O76081 388 aa26.62■■□□□ 1.85
CLDND1-230ENST00000514537 AFG1LQ8WV93 481 aa26.62■■□□□ 1.85
CLDND1-230ENST00000514537 TCEANC2Q96MN5 208 aa26.62■■□□□ 1.85
CLDND1-230ENST00000514537 TRPV6Q9H1D0 765 aa26.62■■□□□ 1.85
CLDND1-230ENST00000514537 ALDH8A1Q9H2A2 487 aaPredicted RBP26.62■■□□□ 1.85
CLDND1-230ENST00000514537 SYNE3Q6ZMZ3 975 aa26.61■■□□□ 1.85
CLDND1-230ENST00000514537 TMTC3Q6ZXV5 915 aa26.61■■□□□ 1.85
CLDND1-230ENST00000514537 MICU3Q86XE3 530 aa26.61■■□□□ 1.85
CLDND1-230ENST00000514537 IL31RAQ8NI17 732 aa26.61■■□□□ 1.85
CLDND1-230ENST00000514537 PPP1R12CQ9BZL4 782 aa26.61■■□□□ 1.85
CLDND1-230ENST00000514537 MRVI1Q9Y6F6 885 aa26.61■■□□□ 1.85
CLDND1-230ENST00000514537 HMGB1P09429 215 aaKnown RBP26.6■■□□□ 1.85
CLDND1-230ENST00000514537 HSPA4P34932 840 aa26.6■■□□□ 1.85
CLDND1-230ENST00000514537 NBPF20Q3BBV1 942 aa26.6■■□□□ 1.85
CLDND1-230ENST00000514537 APOA5Q6Q788 366 aa26.6■■□□□ 1.85
CLDND1-230ENST00000514537 EMID1Q96A84 441 aaPredicted RBP26.6■■□□□ 1.85
CLDND1-230ENST00000514537 BRPF3Q9ULD4 1205 aa26.6■■□□□ 1.85
CLDND1-230ENST00000514537 PIK3CDO00329 1044 aa26.59■■□□□ 1.85
CLDND1-230ENST00000514537 MMP3P08254 477 aa26.59■■□□□ 1.85
CLDND1-230ENST00000514537 CCND2P30279 289 aa26.59■■□□□ 1.85
CLDND1-230ENST00000514537 KCNV1Q6PIU1 500 aa26.59■■□□□ 1.85
CLDND1-230ENST00000514537 TMEM199Q8N511 208 aa26.59■■□□□ 1.85
CLDND1-230ENST00000514537 FRMPD4Q14CM0 1322 aa26.59■■□□□ 1.85
CLDND1-230ENST00000514537 MEIS2O14770 477 aa26.58■■□□□ 1.85
CLDND1-230ENST00000514537 CYP2C18P33260 490 aa26.58■■□□□ 1.85
CLDND1-230ENST00000514537 PPIGQ13427 754 aaKnown RBP eCLIP26.58■■□□□ 1.85
CLDND1-230ENST00000514537 LAMC2Q13753 1193 aa26.58■■□□□ 1.85
CLDND1-230ENST00000514537 NFRKBQ6P4R8 1299 aa26.58■■□□□ 1.85
CLDND1-230ENST00000514537 CCDC82Q8N4S0 544 aa26.58■■□□□ 1.85
CLDND1-230ENST00000514537 HIPK3Q9H422 1215 aa26.58■■□□□ 1.85
CLDND1-230ENST00000514537 TRMT13Q9NUP7 481 aaKnown RBP26.58■■□□□ 1.85
CLDND1-230ENST00000514537 SUPT20HL2P0C7V6 817 aa26.57■■□□□ 1.84
CLDND1-230ENST00000514537 TGFB3P10600 412 aa26.57■■□□□ 1.84
CLDND1-230ENST00000514537 CSF2RAP15509 400 aa26.57■■□□□ 1.84
CLDND1-230ENST00000514537 USP17L6PQ6QN14 398 aa26.57■■□□□ 1.84
CLDND1-230ENST00000514537 C16orf59Q7L2K0 433 aa26.57■■□□□ 1.84
CLDND1-230ENST00000514537 DEFB123Q8N688 67 aa26.57■■□□□ 1.84
CLDND1-230ENST00000514537 SMARCC2Q8TAQ2 1214 aa26.57■■□□□ 1.84
CLDND1-230ENST00000514537 CUL5Q93034 780 aa26.57■■□□□ 1.84
CLDND1-230ENST00000514537 RNPC3Q96LT9 517 aaKnown RBP26.57■■□□□ 1.84
CLDND1-230ENST00000514537 NOC4LQ9BVI4 516 aaKnown RBP26.57■■□□□ 1.84
CLDND1-230ENST00000514537 RBM28Q9NW13 759 aaKnown RBP26.57■■□□□ 1.84
CLDND1-230ENST00000514537 hCG_1642624A0A1W2PR95 340 aa26.56■■□□□ 1.84
CLDND1-230ENST00000514537 REC8O95072 547 aa26.56■■□□□ 1.84
CLDND1-230ENST00000514537 CASTP20810 708 aaKnown RBP26.56■■□□□ 1.84
CLDND1-230ENST00000514537 MRPS9P82933 396 aaKnown RBP26.56■■□□□ 1.84
CLDND1-230ENST00000514537 PTPN11Q06124 597 aaPredicted RBP26.56■■□□□ 1.84
CLDND1-230ENST00000514537 Q7L0L9 218 aa26.56■■□□□ 1.84
CLDND1-230ENST00000514537 DHX37Q8IY37 1157 aaKnown RBP26.56■■□□□ 1.84
CLDND1-230ENST00000514537 ZFP91Q96JP5 570 aaPredicted RBP26.56■■□□□ 1.84
CLDND1-230ENST00000514537 PPP4R2Q9NY27 417 aa26.56■■□□□ 1.84
CLDND1-230ENST00000514537 SNX14Q9Y5W7 946 aa26.56■■□□□ 1.84
CLDND1-230ENST00000514537 UMODL1Q5DID0 1318 aa26.56■■□□□ 1.84
CLDND1-230ENST00000514537 SCN10AQ9Y5Y9 1956 aa26.55■■□□□ 1.84
CLDND1-230ENST00000514537 ZBTB43O43298 467 aa26.55■■□□□ 1.84
CLDND1-230ENST00000514537 STAM2O75886 525 aa26.55■■□□□ 1.84
CLDND1-230ENST00000514537 DGKDQ16760 1214 aa26.55■■□□□ 1.84
CLDND1-230ENST00000514537 MYSM1Q5VVJ2 828 aa26.55■■□□□ 1.84
CLDND1-230ENST00000514537 ERICH6BQ5W0A0 696 aa26.55■■□□□ 1.84
CLDND1-230ENST00000514537 FAM109BQ6ICB4 259 aaPredicted RBP26.55■■□□□ 1.84
CLDND1-230ENST00000514537 PPTC7Q8NI37 304 aa26.55■■□□□ 1.84
CLDND1-230ENST00000514537 KAT2BQ92831 832 aa26.55■■□□□ 1.84
CLDND1-230ENST00000514537 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.55■■□□□ 1.84
CLDND1-230ENST00000514537 PSTPIP2Q9H939 334 aa26.55■■□□□ 1.84
CLDND1-230ENST00000514537 CPA1P15085 419 aa26.54■■□□□ 1.84
CLDND1-230ENST00000514537 SMAD3P84022 425 aaKnown RBP26.54■■□□□ 1.84
CLDND1-230ENST00000514537 SP2Q02086 613 aa26.54■■□□□ 1.84
CLDND1-230ENST00000514537 FUT2Q10981 343 aa26.54■■□□□ 1.84
CLDND1-230ENST00000514537 RTN1Q16799 776 aa26.54■■□□□ 1.84
CLDND1-230ENST00000514537 FAM47CQ5HY64 1035 aa26.54■■□□□ 1.84
CLDND1-230ENST00000514537 TMEM240Q5SV17 173 aa26.54■■□□□ 1.84
CLDND1-230ENST00000514537 CELF3Q5SZQ8 465 aaKnown RBP26.54■■□□□ 1.84
CLDND1-230ENST00000514537 PPP1R13LQ8WUF5 828 aa26.54■■□□□ 1.84
CLDND1-230ENST00000514537 GPKOWQ92917 476 aaPredicted RBP eCLIP26.54■■□□□ 1.84
CLDND1-230ENST00000514537 JAKMIP1Q96N16 626 aaKnown RBP26.54■■□□□ 1.84
CLDND1-230ENST00000514537 KIAA1217Q5T5P2 1943 aa26.53■■□□□ 1.84
CLDND1-230ENST00000514537 KLF18A0A0U1RQI7 1052 aa26.53■■□□□ 1.84
CLDND1-230ENST00000514537 CYP2C9P11712 490 aa26.53■■□□□ 1.84
CLDND1-230ENST00000514537 UBA1P22314 1058 aaKnown RBP26.53■■□□□ 1.84
CLDND1-230ENST00000514537 ICAM3P32942 547 aa26.53■■□□□ 1.84
CLDND1-230ENST00000514537 RCAN1P53805 252 aa26.53■■□□□ 1.84
CLDND1-230ENST00000514537 INPP4AQ96PE3 977 aaPredicted RBP26.53■■□□□ 1.84
CLDND1-230ENST00000514537 WNT8AQ9H1J5 351 aa26.53■■□□□ 1.84
CLDND1-230ENST00000514537 IL23AQ9NPF7 189 aa26.53■■□□□ 1.84
CLDND1-230ENST00000514537 FAM217BQ9NTX9 383 aaPredicted RBP26.53■■□□□ 1.84
CLDND1-230ENST00000514537 EPB41L2O43491 1005 aaKnown RBP26.52■■□□□ 1.84
CLDND1-230ENST00000514537 PPFIA4O75335 1185 aa26.52■■□□□ 1.84
CLDND1-230ENST00000514537 GGPS1O95749 300 aa26.52■■□□□ 1.84
CLDND1-230ENST00000514537 ACRP10323 421 aa26.52■■□□□ 1.84
CLDND1-230ENST00000514537 HOXD8P13378 290 aaPredicted RBP26.52■■□□□ 1.84
CLDND1-230ENST00000514537 CCL23P55773 120 aa26.52■■□□□ 1.84
CLDND1-230ENST00000514537 GNPTABQ3T906 1256 aa26.52■■□□□ 1.84
CLDND1-230ENST00000514537 XRRA1Q6P2D8 792 aa26.52■■□□□ 1.84
CLDND1-230ENST00000514537 CNTNAP5Q8WYK1 1306 aa26.52■■□□□ 1.84
CLDND1-230ENST00000514537 MTMR10Q9NXD2 777 aa26.52■■□□□ 1.84
CLDND1-230ENST00000514537 HSDL1Q3SXM5 330 aa26.51■■□□□ 1.83
CLDND1-230ENST00000514537 PCNX4Q63HM2 1172 aa26.51■■□□□ 1.83
CLDND1-230ENST00000514537 PSRC1Q6PGN9 363 aaPredicted RBP26.51■■□□□ 1.83
CLDND1-230ENST00000514537 BLOC1S2Q6QNY1 142 aa26.51■■□□□ 1.83
CLDND1-230ENST00000514537 Q6ZUG5 572 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms