RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 CPA1P15085 419 aa17.96■□□□□ 0.47
CLDND1-211ENST00000506575 LY6KQ17RY6 165 aa17.96■□□□□ 0.47
CLDND1-211ENST00000506575 CCDC62Q6P9F0 684 aa17.96■□□□□ 0.47
CLDND1-211ENST00000506575 MRVI1Q9Y6F6 885 aa17.96■□□□□ 0.47
CLDND1-211ENST00000506575 hCG_1642624A0A1W2PR95 340 aa17.95■□□□□ 0.46
CLDND1-211ENST00000506575 A6NJR5 290 aa17.95■□□□□ 0.46
CLDND1-211ENST00000506575 KPNA6O60684 536 aa17.95■□□□□ 0.46
CLDND1-211ENST00000506575 PSMC6P62333 389 aa17.95■□□□□ 0.46
CLDND1-211ENST00000506575 PURAQ00577 322 aaKnown RBP17.95■□□□□ 0.46
CLDND1-211ENST00000506575 KCNV1Q6PIU1 500 aa17.95■□□□□ 0.46
CLDND1-211ENST00000506575 Q6ZUG5 572 aa17.95■□□□□ 0.46
CLDND1-211ENST00000506575 VSIG10LQ86VR7 867 aa17.95■□□□□ 0.46
CLDND1-211ENST00000506575 FAM126BQ8IXS8 530 aa17.95■□□□□ 0.46
CLDND1-211ENST00000506575 SLC43A3Q8NBI5 491 aa17.95■□□□□ 0.46
CLDND1-211ENST00000506575 MTG1Q9BT17 334 aaPredicted RBP17.95■□□□□ 0.46
CLDND1-211ENST00000506575 MYH7BA7E2Y1 1941 aa17.94■□□□□ 0.46
CLDND1-211ENST00000506575 LAMA3Q16787 3333 aa17.94■□□□□ 0.46
CLDND1-211ENST00000506575 CASTP20810 708 aaKnown RBP17.94■□□□□ 0.46
CLDND1-211ENST00000506575 RPS6KB1P23443 525 aa17.94■□□□□ 0.46
CLDND1-211ENST00000506575 RCAN1P53805 252 aa17.94■□□□□ 0.46
CLDND1-211ENST00000506575 USP17L6PQ6QN14 398 aa17.94■□□□□ 0.46
CLDND1-211ENST00000506575 HEATR3Q7Z4Q2 680 aa17.94■□□□□ 0.46
CLDND1-211ENST00000506575 IL31RAQ8NI17 732 aa17.94■□□□□ 0.46
CLDND1-211ENST00000506575 BRF1Q92994 677 aa17.94■□□□□ 0.46
CLDND1-211ENST00000506575 PSTPIP2Q9H939 334 aa17.94■□□□□ 0.46
CLDND1-211ENST00000506575 DDX41Q9UJV9 622 aaKnown RBP17.94■□□□□ 0.46
CLDND1-211ENST00000506575 CCDC196A0A1B0GTZ2 297 aa17.93■□□□□ 0.46
CLDND1-211ENST00000506575 PIK3CDO00329 1044 aa17.93■□□□□ 0.46
CLDND1-211ENST00000506575 TIMP1P01033 207 aa17.93■□□□□ 0.46
CLDND1-211ENST00000506575 METAP2P50579 478 aaKnown RBP eCLIP17.93■□□□□ 0.46
CLDND1-211ENST00000506575 FPGSQ05932 587 aa17.93■□□□□ 0.46
CLDND1-211ENST00000506575 ARHGAP1Q07960 439 aa17.93■□□□□ 0.46
CLDND1-211ENST00000506575 APOBRQ0VD83 1088 aa17.93■□□□□ 0.46
CLDND1-211ENST00000506575 LRIT3Q3SXY7 679 aa17.93■□□□□ 0.46
CLDND1-211ENST00000506575 DHX37Q8IY37 1157 aaKnown RBP17.93■□□□□ 0.46
CLDND1-211ENST00000506575 AFG1LQ8WV93 481 aa17.93■□□□□ 0.46
CLDND1-211ENST00000506575 TBX21Q9UL17 535 aa17.93■□□□□ 0.46
CLDND1-211ENST00000506575 CNTNAP5Q8WYK1 1306 aa17.93■□□□□ 0.46
CLDND1-211ENST00000506575 MEIS2O14770 477 aa17.92■□□□□ 0.46
CLDND1-211ENST00000506575 STAM2O75886 525 aa17.92■□□□□ 0.46
CLDND1-211ENST00000506575 RGS20O76081 388 aa17.92■□□□□ 0.46
CLDND1-211ENST00000506575 MMP3P08254 477 aa17.92■□□□□ 0.46
CLDND1-211ENST00000506575 ITGB8P26012 769 aa17.92■□□□□ 0.46
CLDND1-211ENST00000506575 LAMC2Q13753 1193 aa17.92■□□□□ 0.46
CLDND1-211ENST00000506575 GNPTABQ3T906 1256 aa17.92■□□□□ 0.46
CLDND1-211ENST00000506575 GPKOWQ92917 476 aaPredicted RBP eCLIP17.92■□□□□ 0.46
CLDND1-211ENST00000506575 USP26Q9BXU7 913 aa17.92■□□□□ 0.46
CLDND1-211ENST00000506575 GRIN2DO15399 1336 aa17.92■□□□□ 0.46
CLDND1-211ENST00000506575 FRMPD4Q14CM0 1322 aa17.92■□□□□ 0.46
CLDND1-211ENST00000506575 SCN10AQ9Y5Y9 1956 aa17.91■□□□□ 0.46
CLDND1-211ENST00000506575 SOX1O00570 391 aaPredicted RBP17.91■□□□□ 0.46
CLDND1-211ENST00000506575 CD4P01730 458 aa17.91■□□□□ 0.46
CLDND1-211ENST00000506575 TGFB3P10600 412 aa17.91■□□□□ 0.46
CLDND1-211ENST00000506575 CHMP4BP1P59074 171 aa17.91■□□□□ 0.46
CLDND1-211ENST00000506575 DGKDQ16760 1214 aa17.91■□□□□ 0.46
CLDND1-211ENST00000506575 FAM47CQ5HY64 1035 aa17.91■□□□□ 0.46
CLDND1-211ENST00000506575 ZFP91Q96JP5 570 aaPredicted RBP17.91■□□□□ 0.46
CLDND1-211ENST00000506575 PPP1R12CQ9BZL4 782 aa17.91■□□□□ 0.46
CLDND1-211ENST00000506575 V9GY48 417 aaPredicted RBP17.91■□□□□ 0.46
CLDND1-211ENST00000506575 SZT2Q5T011 3432 aa17.9■□□□□ 0.46
CLDND1-211ENST00000506575 SPDYE3A6NKU9 549 aa17.9■□□□□ 0.46
CLDND1-211ENST00000506575 hCG_1984214I3L0E3 225 aa17.9■□□□□ 0.46
CLDND1-211ENST00000506575 SUPT20HL2P0C7V6 817 aa17.9■□□□□ 0.46
CLDND1-211ENST00000506575 CDC27P30260 824 aa17.9■□□□□ 0.46
CLDND1-211ENST00000506575 NAPAP54920 295 aa17.9■□□□□ 0.46
CLDND1-211ENST00000506575 NBPF20Q3BBV1 942 aa17.9■□□□□ 0.46
CLDND1-211ENST00000506575 WWC2Q6AWC2 1192 aa17.9■□□□□ 0.46
CLDND1-211ENST00000506575 MFSD5Q6N075 450 aa17.9■□□□□ 0.46
CLDND1-211ENST00000506575 PPP1R18Q6NYC8 613 aa17.9■□□□□ 0.46
CLDND1-211ENST00000506575 XRRA1Q6P2D8 792 aa17.9■□□□□ 0.46
CLDND1-211ENST00000506575 RUFY3Q7L099 469 aa17.9■□□□□ 0.46
CLDND1-211ENST00000506575 FBXL16Q8N461 479 aa17.9■□□□□ 0.46
CLDND1-211ENST00000506575 TMEM199Q8N511 208 aa17.9■□□□□ 0.46
CLDND1-211ENST00000506575 ZNF713Q8N859 430 aaPredicted RBP17.9■□□□□ 0.46
CLDND1-211ENST00000506575 EMID1Q96A84 441 aaPredicted RBP17.9■□□□□ 0.46
CLDND1-211ENST00000506575 LRCH3Q96II8 777 aa17.9■□□□□ 0.46
CLDND1-211ENST00000506575 TRPV6Q9H1D0 765 aa17.9■□□□□ 0.46
CLDND1-211ENST00000506575 ALDH8A1Q9H2A2 487 aaPredicted RBP17.9■□□□□ 0.46
CLDND1-211ENST00000506575 CYP46A1Q9Y6A2 500 aa17.9■□□□□ 0.46
CLDND1-211ENST00000506575 B4GALT4O60513 344 aa17.89■□□□□ 0.45
CLDND1-211ENST00000506575 GGPS1O95749 300 aa17.89■□□□□ 0.45
CLDND1-211ENST00000506575 ADD1P35611 737 aaKnown RBP17.89■□□□□ 0.45
CLDND1-211ENST00000506575 MRPS9P82933 396 aaKnown RBP17.89■□□□□ 0.45
CLDND1-211ENST00000506575 FUT2Q10981 343 aa17.89■□□□□ 0.45
CLDND1-211ENST00000506575 PPIGQ13427 754 aaKnown RBP eCLIP17.89■□□□□ 0.45
CLDND1-211ENST00000506575 SHHQ15465 462 aa17.89■□□□□ 0.45
CLDND1-211ENST00000506575 UBE2SQ16763 222 aa17.89■□□□□ 0.45
CLDND1-211ENST00000506575 CELF3Q5SZQ8 465 aaKnown RBP17.89■□□□□ 0.45
CLDND1-211ENST00000506575 PCNX4Q63HM2 1172 aa17.89■□□□□ 0.45
CLDND1-211ENST00000506575 NFRKBQ6P4R8 1299 aa17.89■□□□□ 0.45
CLDND1-211ENST00000506575 PPTC7Q8NI37 304 aa17.89■□□□□ 0.45
CLDND1-211ENST00000506575 SPATA33Q96N06 139 aa17.89■□□□□ 0.45
CLDND1-211ENST00000506575 HIPK3Q9H422 1215 aa17.89■□□□□ 0.45
CLDND1-211ENST00000506575 EHMT1Q9H9B1 1298 aa17.89■□□□□ 0.45
CLDND1-211ENST00000506575 MLXIPQ9HAP2 919 aa17.89■□□□□ 0.45
CLDND1-211ENST00000506575 FAM217BQ9NTX9 383 aaPredicted RBP17.89■□□□□ 0.45
CLDND1-211ENST00000506575 RTEL1Q9NZ71 1219 aa17.89■□□□□ 0.45
CLDND1-211ENST00000506575 FIBPO43427 364 aa17.88■□□□□ 0.45
CLDND1-211ENST00000506575 SORBS3O60504 671 aa17.88■□□□□ 0.45
CLDND1-211ENST00000506575 UBA1P22314 1058 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms