RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	C17orf80	Q9BSJ5	609 aa		18.3	■□□□□ 0.52
HDLBP-238	ENST00000479894	KMT2E	Q8IZD2	1858 aa		18.3	■□□□□ 0.52
HDLBP-238	ENST00000479894	NCK2	O43639	380 aa		18.29	■□□□□ 0.52
HDLBP-238	ENST00000479894	NBN	O60934	754 aa		18.29	■□□□□ 0.52
HDLBP-238	ENST00000479894	IRS1	P35568	1242 aa		18.29	■□□□□ 0.52
HDLBP-238	ENST00000479894	PPP4R3B	Q5MIZ7	849 aa		18.29	■□□□□ 0.52
HDLBP-238	ENST00000479894	STK11IP	Q8N1F8	1099 aa		18.29	■□□□□ 0.52
HDLBP-238	ENST00000479894	BANK1	Q8NDB2	785 aa		18.29	■□□□□ 0.52
HDLBP-238	ENST00000479894	PRSS33	Q8NF86	280 aa		18.29	■□□□□ 0.52
HDLBP-238	ENST00000479894	SP7	Q8TDD2	431 aa	Predicted RBP	18.29	■□□□□ 0.52
HDLBP-238	ENST00000479894	SCFD2	Q8WU76	684 aa		18.29	■□□□□ 0.52
HDLBP-238	ENST00000479894	RILPL2	Q969X0	211 aa		18.29	■□□□□ 0.52
HDLBP-238	ENST00000479894	PURB	Q96QR8	312 aa	Known RBP	18.29	■□□□□ 0.52
HDLBP-238	ENST00000479894	MPHOSPH6	Q99547	160 aa	Known RBP	18.29	■□□□□ 0.52
HDLBP-238	ENST00000479894	CCPG1	Q9ULG6	757 aa		18.29	■□□□□ 0.52
HDLBP-238	ENST00000479894	PRR12	Q9ULL5	1215 aa		18.29	■□□□□ 0.52
HDLBP-238	ENST00000479894	ISY1	Q9ULR0	285 aa	Known RBP	18.29	■□□□□ 0.52
HDLBP-238	ENST00000479894	KIAA1217	Q5T5P2	1943 aa		18.29	■□□□□ 0.52
HDLBP-238	ENST00000479894	COL4A6	Q14031	1691 aa		18.28	■□□□□ 0.52
HDLBP-238	ENST00000479894	RNF113A	O15541	343 aa	Known RBP	18.28	■□□□□ 0.52
HDLBP-238	ENST00000479894	ICAM1	P05362	532 aa		18.28	■□□□□ 0.52
HDLBP-238	ENST00000479894	HTRA4	P83105	476 aa	Predicted RBP	18.28	■□□□□ 0.52
HDLBP-238	ENST00000479894	BAAT	Q14032	418 aa	Predicted RBP	18.28	■□□□□ 0.52
HDLBP-238	ENST00000479894	BMP2KL	Q5H9B9	411 aa		18.28	■□□□□ 0.52
HDLBP-238	ENST00000479894	RCSD1	Q6JBY9	416 aa		18.28	■□□□□ 0.52
HDLBP-238	ENST00000479894	PPP1R13L	Q8WUF5	828 aa		18.28	■□□□□ 0.52
HDLBP-238	ENST00000479894	ANKS1A	Q92625	1134 aa		18.28	■□□□□ 0.52
HDLBP-238	ENST00000479894	CACNA1A	O00555	2505 aa		18.28	■□□□□ 0.52
HDLBP-238	ENST00000479894	PTPRZ1	P23471	2315 aa	Predicted RBP	18.28	■□□□□ 0.52
HDLBP-238	ENST00000479894		H3BNC9	293 aa		18.27	■□□□□ 0.52
HDLBP-238	ENST00000479894	TSPY3	P0CV98	308 aa		18.27	■□□□□ 0.52
HDLBP-238	ENST00000479894	TSPY8	P0CW00	308 aa		18.27	■□□□□ 0.52
HDLBP-238	ENST00000479894	CKB	P12277	381 aa		18.27	■□□□□ 0.52
HDLBP-238	ENST00000479894	EPC2	Q52LR7	807 aa		18.27	■□□□□ 0.52
HDLBP-238	ENST00000479894	GDF6	Q6KF10	455 aa	Predicted RBP	18.27	■□□□□ 0.52
HDLBP-238	ENST00000479894	CASC1	Q6TDU7	716 aa		18.27	■□□□□ 0.52
HDLBP-238	ENST00000479894	DHX38	Q92620	1227 aa	Known RBP	18.27	■□□□□ 0.52
HDLBP-238	ENST00000479894	EDA	Q92838	391 aa		18.27	■□□□□ 0.52
HDLBP-238	ENST00000479894	NSUN3	Q9H649	340 aa	Known RBP	18.27	■□□□□ 0.52
HDLBP-238	ENST00000479894	EIF5B	O60841	1220 aa	Known RBP	18.26	■□□□□ 0.51
HDLBP-238	ENST00000479894	PRDM1	O75626	825 aa		18.26	■□□□□ 0.51
HDLBP-238	ENST00000479894	MCC	P23508	829 aa		18.26	■□□□□ 0.51
HDLBP-238	ENST00000479894	EDNRB	P24530	442 aa		18.26	■□□□□ 0.51
HDLBP-238	ENST00000479894	MFAP1	P55081	439 aa	Known RBP	18.26	■□□□□ 0.51
HDLBP-238	ENST00000479894	SMAD2	Q15796	467 aa	Known RBP	18.26	■□□□□ 0.51
HDLBP-238	ENST00000479894	TCTN1	Q2MV58	587 aa		18.26	■□□□□ 0.51
HDLBP-238	ENST00000479894	TCEAL5	Q5H9L2	206 aa		18.26	■□□□□ 0.51
HDLBP-238	ENST00000479894	RUFY2	Q8WXA3	655 aa		18.26	■□□□□ 0.51
HDLBP-238	ENST00000479894	MYH7B	A7E2Y1	1941 aa		18.25	■□□□□ 0.51
HDLBP-238	ENST00000479894	GNAT2	P19087	354 aa		18.25	■□□□□ 0.51
HDLBP-238	ENST00000479894	FAM117B	Q6P1L5	589 aa		18.25	■□□□□ 0.51
HDLBP-238	ENST00000479894	APPBP2	Q92624	585 aa		18.25	■□□□□ 0.51
HDLBP-238	ENST00000479894	RANBP17	Q9H2T7	1088 aa	Known RBP	18.25	■□□□□ 0.51
HDLBP-238	ENST00000479894	DIAPH3	Q9NSV4	1193 aa		18.25	■□□□□ 0.51
HDLBP-238	ENST00000479894	MUTYH	Q9UIF7	546 aa		18.25	■□□□□ 0.51
HDLBP-238	ENST00000479894	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	18.24	■□□□□ 0.51
HDLBP-238	ENST00000479894		B4DLN1	442 aa		18.24	■□□□□ 0.51
HDLBP-238	ENST00000479894	AMH	P03971	560 aa		18.24	■□□□□ 0.51
HDLBP-238	ENST00000479894	TXN	P10599	105 aa	Known RBP	18.24	■□□□□ 0.51
HDLBP-238	ENST00000479894	MRPL12	P52815	198 aa	Known RBP	18.24	■□□□□ 0.51
HDLBP-238	ENST00000479894	PDE4B	Q07343	736 aa		18.24	■□□□□ 0.51
HDLBP-238	ENST00000479894	PDE4D	Q08499	809 aa		18.24	■□□□□ 0.51
HDLBP-238	ENST00000479894	MKRN4P	Q13434	485 aa	Predicted RBP	18.24	■□□□□ 0.51
HDLBP-238	ENST00000479894	GPM6B	Q13491	265 aa		18.24	■□□□□ 0.51
HDLBP-238	ENST00000479894	KCTD1	Q719H9	257 aa		18.24	■□□□□ 0.51
HDLBP-238	ENST00000479894	DNER	Q8NFT8	737 aa		18.24	■□□□□ 0.51
HDLBP-238	ENST00000479894	COPS5	Q92905	334 aa		18.24	■□□□□ 0.51
HDLBP-238	ENST00000479894	IRF2BPL	Q9H1B7	796 aa		18.24	■□□□□ 0.51
HDLBP-238	ENST00000479894	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	18.24	■□□□□ 0.51
HDLBP-238	ENST00000479894	HELLS	Q9NRZ9	838 aa		18.24	■□□□□ 0.51
HDLBP-238	ENST00000479894	CLDND1	Q9NY35	253 aa		18.24	■□□□□ 0.51
HDLBP-238	ENST00000479894	GTF2IRD1	Q9UHL9	959 aa		18.24	■□□□□ 0.51
HDLBP-238	ENST00000479894	PNMA2	Q9UL42	364 aa		18.24	■□□□□ 0.51
HDLBP-238	ENST00000479894	PTPDC1	A2A3K4	754 aa		18.23	■□□□□ 0.51
HDLBP-238	ENST00000479894	GFRA3	O60609	400 aa		18.23	■□□□□ 0.51
HDLBP-238	ENST00000479894	LGR5	O75473	907 aa		18.23	■□□□□ 0.51
HDLBP-238	ENST00000479894	MMP3	P08254	477 aa		18.23	■□□□□ 0.51
HDLBP-238	ENST00000479894	SDS	P20132	328 aa		18.23	■□□□□ 0.51
HDLBP-238	ENST00000479894	LTBR	P36941	435 aa		18.23	■□□□□ 0.51
HDLBP-238	ENST00000479894	TDO2	P48775	406 aa		18.23	■□□□□ 0.51
HDLBP-238	ENST00000479894	SNAP25	P60880	206 aa		18.23	■□□□□ 0.51
HDLBP-238	ENST00000479894	TCF15	Q12870	199 aa		18.23	■□□□□ 0.51
HDLBP-238	ENST00000479894	PTK7	Q13308	1070 aa		18.23	■□□□□ 0.51
HDLBP-238	ENST00000479894	CTC1	Q2NKJ3	1217 aa		18.23	■□□□□ 0.51
HDLBP-238	ENST00000479894	TRAF7	Q6Q0C0	670 aa		18.23	■□□□□ 0.51
HDLBP-238	ENST00000479894	EP400NL	Q6ZTU2	488 aa		18.23	■□□□□ 0.51
HDLBP-238	ENST00000479894	RPAIN	Q86UA6	219 aa		18.23	■□□□□ 0.51
HDLBP-238	ENST00000479894	RNF135	Q8IUD6	432 aa		18.23	■□□□□ 0.51
HDLBP-238	ENST00000479894	EMSY	Q7Z589	1322 aa		18.23	■□□□□ 0.51
HDLBP-238	ENST00000479894	NFIB	O00712	420 aa		18.22	■□□□□ 0.51
HDLBP-238	ENST00000479894	MBTPS2	O43462	519 aa		18.22	■□□□□ 0.51
HDLBP-238	ENST00000479894	TFAP4	Q01664	338 aa		18.22	■□□□□ 0.51
HDLBP-238	ENST00000479894	IER5L	Q5T953	404 aa		18.22	■□□□□ 0.51
HDLBP-238	ENST00000479894	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	18.22	■□□□□ 0.51	4e-15	■□□□□ 8.7
HDLBP-238	ENST00000479894	KAT2B	Q92831	832 aa		18.22	■□□□□ 0.51
HDLBP-238	ENST00000479894	PBXIP1	Q96AQ6	731 aa		18.22	■□□□□ 0.51
HDLBP-238	ENST00000479894	FAM186A	A6NE01	2351 aa		18.22	■□□□□ 0.51
HDLBP-238	ENST00000479894	RIF1	Q5UIP0	2472 aa	Known RBP	18.21	■□□□□ 0.51
HDLBP-238	ENST00000479894	PLXNA3	P51805	1871 aa		18.21	■□□□□ 0.51
HDLBP-238	ENST00000479894	TMEM221	A6NGB7	291 aa		18.21	■□□□□ 0.51

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