RNA–Protein interactions for RNA: ENST00000476658.5

DFFA-203, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 3

Gene DFFA, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-203ENST00000476658 FSCN1Q16658 493 aaKnown RBP17.27■□□□□ 0.36
DFFA-203ENST00000476658 LRRC26Q2I0M4 334 aa17.27■□□□□ 0.36
DFFA-203ENST00000476658 VSIG10LQ86VR7 867 aa17.27■□□□□ 0.36
DFFA-203ENST00000476658 TRIM22Q8IYM9 498 aa17.27■□□□□ 0.36
DFFA-203ENST00000476658 OR6J1Q8NGC5 347 aa17.27■□□□□ 0.36
DFFA-203ENST00000476658 ZFP91Q96JP5 570 aaPredicted RBP17.27■□□□□ 0.36
DFFA-203ENST00000476658 RIC8AQ9NPQ8 531 aa17.27■□□□□ 0.36
DFFA-203ENST00000476658 Q9Y3F1 56 aa17.27■□□□□ 0.36
DFFA-203ENST00000476658 NR2E3Q9Y5X4 410 aa17.27■□□□□ 0.36
DFFA-203ENST00000476658 DNAH12Q6ZR08 3092 aa17.27■□□□□ 0.36
DFFA-203ENST00000476658 A0A1W2PQ45 241 aaPredicted RBP17.26■□□□□ 0.35
DFFA-203ENST00000476658 A0A1W2PQY0 241 aa17.26■□□□□ 0.35
DFFA-203ENST00000476658 MOXD2PA6NHM9 499 aa17.26■□□□□ 0.35
DFFA-203ENST00000476658 NKRFO15226 690 aaKnown RBP eCLIP17.26■□□□□ 0.35
DFFA-203ENST00000476658 ARIH2O95376 493 aa17.26■□□□□ 0.35
DFFA-203ENST00000476658 SCRN1Q12765 414 aa17.26■□□□□ 0.35
DFFA-203ENST00000476658 PKN1Q16512 942 aa17.26■□□□□ 0.35
DFFA-203ENST00000476658 C7orf61Q8IZ16 206 aa17.26■□□□□ 0.35
DFFA-203ENST00000476658 CCDC12Q8WUD4 166 aaPredicted RBP17.26■□□□□ 0.35
DFFA-203ENST00000476658 COPS5Q92905 334 aa17.26■□□□□ 0.35
DFFA-203ENST00000476658 MRVI1Q9Y6F6 885 aa17.26■□□□□ 0.35
DFFA-203ENST00000476658 FRMPD4Q14CM0 1322 aa17.25■□□□□ 0.35
DFFA-203ENST00000476658 CTAGE5O15320 804 aa17.25■□□□□ 0.35
DFFA-203ENST00000476658 ZEB2O60315 1214 aa17.25■□□□□ 0.35
DFFA-203ENST00000476658 PFKFB2O60825 505 aa17.25■□□□□ 0.35
DFFA-203ENST00000476658 ASGR1P07306 291 aa17.25■□□□□ 0.35
DFFA-203ENST00000476658 CCSAPQ6IQ19 270 aaPredicted RBP17.25■□□□□ 0.35
DFFA-203ENST00000476658 SLC39A5Q6ZMH5 540 aa17.25■□□□□ 0.35
DFFA-203ENST00000476658 VTI1AQ96AJ9 217 aa17.25■□□□□ 0.35
DFFA-203ENST00000476658 GLT8D2Q9H1C3 349 aa17.25■□□□□ 0.35
DFFA-203ENST00000476658 EHMT1Q9H9B1 1298 aa17.25■□□□□ 0.35
DFFA-203ENST00000476658 STARD7Q9NQZ5 370 aa17.25■□□□□ 0.35
DFFA-203ENST00000476658 PCDHA6Q9UN73 950 aa17.25■□□□□ 0.35
DFFA-203ENST00000476658 PCDHA8Q9Y5H6 950 aa17.25■□□□□ 0.35
DFFA-203ENST00000476658 DOCK5Q9H7D0 1870 aa17.24■□□□□ 0.35
DFFA-203ENST00000476658 CDKL5O76039 1030 aa17.24■□□□□ 0.35
DFFA-203ENST00000476658 RTP1P59025 263 aa17.24■□□□□ 0.35
DFFA-203ENST00000476658 NKX3-2P78367 333 aa17.24■□□□□ 0.35
DFFA-203ENST00000476658 MRPS9P82933 396 aaKnown RBP17.24■□□□□ 0.35
DFFA-203ENST00000476658 LY6KQ17RY6 165 aa17.24■□□□□ 0.35
DFFA-203ENST00000476658 BRDTQ58F21 947 aaPredicted RBP17.24■□□□□ 0.35
DFFA-203ENST00000476658 PRPF38BQ5VTL8 546 aaKnown RBP17.24■□□□□ 0.35
DFFA-203ENST00000476658 PCNX4Q63HM2 1172 aa17.24■□□□□ 0.35
DFFA-203ENST00000476658 CCDC62Q6P9F0 684 aa17.24■□□□□ 0.35
DFFA-203ENST00000476658 GLT1D1Q96MS3 346 aa17.24■□□□□ 0.35
DFFA-203ENST00000476658 RTEL1Q9NZ71 1219 aa17.24■□□□□ 0.35
DFFA-203ENST00000476658 ATP11BQ9Y2G3 1177 aa17.24■□□□□ 0.35
DFFA-203ENST00000476658 H0YGN5 161 aa17.23■□□□□ 0.35
DFFA-203ENST00000476658 STAM2O75886 525 aa17.23■□□□□ 0.35
DFFA-203ENST00000476658 RGS20O76081 388 aa17.23■□□□□ 0.35
DFFA-203ENST00000476658 DEXIO95424 95 aa17.23■□□□□ 0.35
DFFA-203ENST00000476658 GH1P01241 217 aa17.23■□□□□ 0.35
DFFA-203ENST00000476658 RBM25P49756 843 aaKnown RBP17.23■□□□□ 0.35
DFFA-203ENST00000476658 CPT1AP50416 773 aa17.23■□□□□ 0.35
DFFA-203ENST00000476658 ME3Q16798 604 aa17.23■□□□□ 0.35
DFFA-203ENST00000476658 GNPTABQ3T906 1256 aa17.23■□□□□ 0.35
DFFA-203ENST00000476658 KCNV1Q6PIU1 500 aa17.23■□□□□ 0.35
DFFA-203ENST00000476658 TEX2Q8IWB9 1127 aa17.23■□□□□ 0.35
DFFA-203ENST00000476658 NECAB1Q8N987 351 aa17.23■□□□□ 0.35
DFFA-203ENST00000476658 CCDC148Q8NFR7 591 aa17.23■□□□□ 0.35
DFFA-203ENST00000476658 PGBD1Q96JS3 809 aa17.23■□□□□ 0.35
DFFA-203ENST00000476658 C6orf50Q9HD87 102 aa17.23■□□□□ 0.35
DFFA-203ENST00000476658 VPS54Q9P1Q0 977 aa17.23■□□□□ 0.35
DFFA-203ENST00000476658 DDX41Q9UJV9 622 aaKnown RBP17.23■□□□□ 0.35
DFFA-203ENST00000476658 ESYT2A0FGR8 921 aa17.22■□□□□ 0.35
DFFA-203ENST00000476658 LARGE1O95461 756 aa17.22■□□□□ 0.35
DFFA-203ENST00000476658 FOSP01100 380 aaPredicted RBP17.22■□□□□ 0.35
DFFA-203ENST00000476658 MYL3P08590 195 aa17.22■□□□□ 0.35
DFFA-203ENST00000476658 XRRA1Q6P2D8 792 aa17.22■□□□□ 0.35
DFFA-203ENST00000476658 CXCL17Q6UXB2 119 aa17.22■□□□□ 0.35
DFFA-203ENST00000476658 KIF2CQ99661 725 aa17.22■□□□□ 0.35
DFFA-203ENST00000476658 ANO3Q9BYT9 981 aa17.22■□□□□ 0.35
DFFA-203ENST00000476658 ZMYND12Q9H0C1 365 aa17.22■□□□□ 0.35
DFFA-203ENST00000476658 TMEM260Q9NX78 707 aa17.22■□□□□ 0.35
DFFA-203ENST00000476658 ELP1O95163 1332 aa17.21■□□□□ 0.35
DFFA-203ENST00000476658 SORBS3O60504 671 aa17.21■□□□□ 0.35
DFFA-203ENST00000476658 GNA11P29992 359 aa17.21■□□□□ 0.35
DFFA-203ENST00000476658 ARHGAP1Q07960 439 aa17.21■□□□□ 0.35
DFFA-203ENST00000476658 AP3B2Q13367 1082 aa17.21■□□□□ 0.35
DFFA-203ENST00000476658 SNX17Q15036 470 aa17.21■□□□□ 0.35
DFFA-203ENST00000476658 TRIM60Q495X7 471 aa17.21■□□□□ 0.35
DFFA-203ENST00000476658 JAKMIP3Q5VZ66 844 aa17.21■□□□□ 0.35
DFFA-203ENST00000476658 NLRX1Q86UT6 975 aa17.21■□□□□ 0.35
DFFA-203ENST00000476658 DHX37Q8IY37 1157 aaKnown RBP17.21■□□□□ 0.35
DFFA-203ENST00000476658 REXO1Q8N1G1 1221 aaKnown RBP17.21■□□□□ 0.35
DFFA-203ENST00000476658 AFG1LQ8WV93 481 aa17.21■□□□□ 0.35
DFFA-203ENST00000476658 GTF3C6Q969F1 213 aa17.21■□□□□ 0.35
DFFA-203ENST00000476658 INPP4AQ96PE3 977 aaPredicted RBP17.21■□□□□ 0.35
DFFA-203ENST00000476658 SH3GLB2Q9NR46 395 aa17.21■□□□□ 0.35
DFFA-203ENST00000476658 POLR3EQ9NVU0 708 aa17.21■□□□□ 0.35
DFFA-203ENST00000476658 ZMYND8Q9ULU4 1186 aaPredicted RBP17.21■□□□□ 0.35
DFFA-203ENST00000476658 A0A0U1RQG5 324 aaPredicted RBP17.2■□□□□ 0.34
DFFA-203ENST00000476658 DTNBO60941 627 aa17.2■□□□□ 0.34
DFFA-203ENST00000476658 CABYRO75952 493 aa17.2■□□□□ 0.34
DFFA-203ENST00000476658 TGFB3P10600 412 aa17.2■□□□□ 0.34
DFFA-203ENST00000476658 CLK2P49760 499 aaKnown RBP17.2■□□□□ 0.34
DFFA-203ENST00000476658 NLRP5P59047 1200 aa17.2■□□□□ 0.34
DFFA-203ENST00000476658 C1orf53Q5VUE5 145 aa17.2■□□□□ 0.34
DFFA-203ENST00000476658 BICD2Q8TD16 824 aa17.2■□□□□ 0.34
DFFA-203ENST00000476658 AIFM3Q96NN9 605 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms