RNA–Protein interactions for RNA: ENST00000476289.5

CHKB-207, Transcript of choline kinase beta, humanhuman

TSL 5

Gene CHKB, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-207ENST00000476289 TSGA10IPQ3SY00 556 aa37.23■■■■□ 3.55
CHKB-207ENST00000476289 PPP1R13LQ8WUF5 828 aa37.23■■■■□ 3.55
CHKB-207ENST00000476289 DDX41Q9UJV9 622 aaKnown RBP37.23■■■■□ 3.55
CHKB-207ENST00000476289 UMODL1Q5DID0 1318 aa37.22■■■■□ 3.55
CHKB-207ENST00000476289 CYP2C18P33260 490 aa37.22■■■■□ 3.55
CHKB-207ENST00000476289 EXOSC10Q01780 885 aaKnown RBP37.22■■■■□ 3.55
CHKB-207ENST00000476289 MRVI1Q9Y6F6 885 aa37.22■■■■□ 3.55
CHKB-207ENST00000476289 CSF2RAP15509 400 aa37.21■■■■□ 3.55
CHKB-207ENST00000476289 VSIG10LQ86VR7 867 aa37.21■■■■□ 3.55
CHKB-207ENST00000476289 MICU3Q86XE3 530 aa37.21■■■■□ 3.55
CHKB-207ENST00000476289 RNPC3Q96LT9 517 aaKnown RBP37.21■■■■□ 3.55
CHKB-207ENST00000476289 HIPK3Q9H422 1215 aa37.21■■■■□ 3.55
CHKB-207ENST00000476289 SEC63Q9UGP8 760 aaKnown RBP37.21■■■■□ 3.55
CHKB-207ENST00000476289 KPNA6O60684 536 aa37.2■■■■□ 3.55
CHKB-207ENST00000476289 NEFLP07196 543 aa37.2■■■■□ 3.55
CHKB-207ENST00000476289 MMP3P08254 477 aa37.2■■■■□ 3.55
CHKB-207ENST00000476289 NBPF20Q3BBV1 942 aa37.2■■■■□ 3.55
CHKB-207ENST00000476289 FANCBQ8NB91 859 aa37.2■■■■□ 3.55
CHKB-207ENST00000476289 ZFP91Q96JP5 570 aaPredicted RBP37.2■■■■□ 3.55
CHKB-207ENST00000476289 TRMT13Q9NUP7 481 aaKnown RBP37.2■■■■□ 3.55
CHKB-207ENST00000476289 TMTC3Q6ZXV5 915 aa37.19■■■■□ 3.54
CHKB-207ENST00000476289 C16orf59Q7L2K0 433 aa37.19■■■■□ 3.54
CHKB-207ENST00000476289 DHX32Q7L7V1 743 aaKnown RBP37.19■■■■□ 3.54
CHKB-207ENST00000476289 BUD13Q9BRD0 619 aaKnown RBP eCLIP37.19■■■■□ 3.545e-7■■□□□ 13.4
CHKB-207ENST00000476289 NOC4LQ9BVI4 516 aaKnown RBP37.19■■■■□ 3.54
CHKB-207ENST00000476289 COL6A3P12111 3177 aa37.19■■■■□ 3.54
CHKB-207ENST00000476289 FRMPD4Q14CM0 1322 aa37.18■■■■□ 3.54
CHKB-207ENST00000476289 PPIGQ13427 754 aaKnown RBP eCLIP37.18■■■■□ 3.545e-8■■□□□ 12.7
CHKB-207ENST00000476289 APOA5Q6Q788 366 aa37.18■■■■□ 3.54
CHKB-207ENST00000476289 TMEM199Q8N511 208 aa37.18■■■■□ 3.54
CHKB-207ENST00000476289 hCG_1642624A0A1W2PR95 340 aa37.17■■■■□ 3.54
CHKB-207ENST00000476289 CCND2P30279 289 aa37.17■■■■□ 3.54
CHKB-207ENST00000476289 KRT32Q14532 448 aa37.17■■■■□ 3.54
CHKB-207ENST00000476289 FAM47CQ5HY64 1035 aa37.17■■■■□ 3.54
CHKB-207ENST00000476289 CCDC82Q8N4S0 544 aa37.17■■■■□ 3.54
CHKB-207ENST00000476289 BRPF3Q9ULD4 1205 aa37.17■■■■□ 3.54
CHKB-207ENST00000476289 EMID1Q96A84 441 aaPredicted RBP37.16■■■■□ 3.54
CHKB-207ENST00000476289 MTMR10Q9NXD2 777 aa37.16■■■■□ 3.54
CHKB-207ENST00000476289 MYH7BA7E2Y1 1941 aa37.16■■■■□ 3.54
CHKB-207ENST00000476289 ACRP10323 421 aa37.15■■■■□ 3.54
CHKB-207ENST00000476289 NFRKBQ6P4R8 1299 aa37.15■■■■□ 3.54
CHKB-207ENST00000476289 USP17L6PQ6QN14 398 aa37.15■■■■□ 3.54
CHKB-207ENST00000476289 GPKOWQ92917 476 aaPredicted RBP eCLIP37.15■■■■□ 3.54
CHKB-207ENST00000476289 KCNB2Q92953 911 aa37.15■■■■□ 3.54
CHKB-207ENST00000476289 WNT8AQ9H1J5 351 aa37.15■■■■□ 3.54
CHKB-207ENST00000476289 MEIS2O14770 477 aa37.14■■■■□ 3.54
CHKB-207ENST00000476289 CYP2C9P11712 490 aa37.14■■■■□ 3.54
CHKB-207ENST00000476289 TMEM240Q5SV17 173 aa37.14■■■■□ 3.54
CHKB-207ENST00000476289 KAT2BQ92831 832 aa37.14■■■■□ 3.54
CHKB-207ENST00000476289 CCL23P55773 120 aa37.13■■■■□ 3.53
CHKB-207ENST00000476289 MRPS9P82933 396 aaKnown RBP37.13■■■■□ 3.53
CHKB-207ENST00000476289 SMAD3P84022 425 aaKnown RBP37.13■■■■□ 3.53
CHKB-207ENST00000476289 SYNE3Q6ZMZ3 975 aa37.13■■■■□ 3.53
CHKB-207ENST00000476289 DHX37Q8IY37 1157 aaKnown RBP37.13■■■■□ 3.53
CHKB-207ENST00000476289 PIK3CDO00329 1044 aa37.12■■■■□ 3.53
CHKB-207ENST00000476289 SORBS3O60504 671 aa37.12■■■■□ 3.53
CHKB-207ENST00000476289 CPA1P15085 419 aa37.12■■■■□ 3.53
CHKB-207ENST00000476289 CHMP4BP1P59074 171 aa37.12■■■■□ 3.53
CHKB-207ENST00000476289 SP2Q02086 613 aa37.12■■■■□ 3.53
CHKB-207ENST00000476289 LAMC2Q13753 1193 aa37.12■■■■□ 3.53
CHKB-207ENST00000476289 FAM109BQ6ICB4 259 aaPredicted RBP37.12■■■■□ 3.53
CHKB-207ENST00000476289 PPTC7Q8NI37 304 aa37.12■■■■□ 3.53
CHKB-207ENST00000476289 SMARCC2Q8TAQ2 1214 aa37.12■■■■□ 3.53
CHKB-207ENST00000476289 CNTNAP5Q8WYK1 1306 aa37.11■■■■□ 3.53
CHKB-207ENST00000476289 SUPT20HL2P0C7V6 817 aa37.11■■■■□ 3.53
CHKB-207ENST00000476289 UBA1P22314 1058 aaKnown RBP37.11■■■■□ 3.53
CHKB-207ENST00000476289 HSPA4P34932 840 aa37.11■■■■□ 3.53
CHKB-207ENST00000476289 DGKDQ16760 1214 aa37.11■■■■□ 3.53
CHKB-207ENST00000476289 KCNV1Q6PIU1 500 aa37.11■■■■□ 3.53
CHKB-207ENST00000476289 IL23AQ9NPF7 189 aa37.11■■■■□ 3.53
CHKB-207ENST00000476289 SNX14Q9Y5W7 946 aa37.11■■■■□ 3.53
CHKB-207ENST00000476289 ZBTB43O43298 467 aa37.1■■■■□ 3.53
CHKB-207ENST00000476289 CASTP20810 708 aaKnown RBP37.1■■■■□ 3.53
CHKB-207ENST00000476289 CELF3Q5SZQ8 465 aaKnown RBP37.1■■■■□ 3.53
CHKB-207ENST00000476289 MYSM1Q5VVJ2 828 aa37.1■■■■□ 3.53
CHKB-207ENST00000476289 ZNF365Q70YC5 407 aa37.1■■■■□ 3.53
CHKB-207ENST00000476289 CUL5Q93034 780 aa37.1■■■■□ 3.53
CHKB-207ENST00000476289 GGPS1O95749 300 aa37.09■■■■□ 3.53
CHKB-207ENST00000476289 HMGB1P09429 215 aaKnown RBP37.09■■■■□ 3.53
CHKB-207ENST00000476289 PTPN11Q06124 597 aaPredicted RBP37.09■■■■□ 3.53
CHKB-207ENST00000476289 RTN1Q16799 776 aa37.09■■■■□ 3.53
CHKB-207ENST00000476289 JAKMIP1Q96N16 626 aaKnown RBP37.09■■■■□ 3.53
CHKB-207ENST00000476289 INPP4AQ96PE3 977 aaPredicted RBP37.09■■■■□ 3.53
CHKB-207ENST00000476289 RBM28Q9NW13 759 aaKnown RBP37.09■■■■□ 3.53
CHKB-207ENST00000476289 KLF18A0A0U1RQI7 1052 aa37.08■■■■□ 3.53
CHKB-207ENST00000476289 ZNF286BP0CG31 522 aa37.08■■■■□ 3.53
CHKB-207ENST00000476289 FUT2Q10981 343 aa37.08■■■■□ 3.53
CHKB-207ENST00000476289 RASIP1Q5U651 963 aa37.08■■■■□ 3.53
CHKB-207ENST00000476289 PSRC1Q6PGN9 363 aaPredicted RBP37.08■■■■□ 3.53
CHKB-207ENST00000476289 SCLYQ96I15 445 aa37.08■■■■□ 3.53
CHKB-207ENST00000476289 FAM161BQ96MY7 647 aa37.08■■■■□ 3.53
CHKB-207ENST00000476289 PSTPIP2Q9H939 334 aa37.08■■■■□ 3.53
CHKB-207ENST00000476289 TGFB3P10600 412 aa37.07■■■■□ 3.52
CHKB-207ENST00000476289 HOXD8P13378 290 aaPredicted RBP37.07■■■■□ 3.52
CHKB-207ENST00000476289 HSDL1Q3SXM5 330 aa37.07■■■■□ 3.52
CHKB-207ENST00000476289 HEATR3Q7Z4Q2 680 aa37.07■■■■□ 3.52
CHKB-207ENST00000476289 BCAS3Q9H6U6 928 aa37.07■■■■□ 3.52
CHKB-207ENST00000476289 RTEL1Q9NZ71 1219 aa37.07■■■■□ 3.52
CHKB-207ENST00000476289 GOLGA8AA7E2F4 631 aa37.06■■■■□ 3.52
CHKB-207ENST00000476289 GOLGA8BA8MQT2 603 aa37.06■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 226.7 ms