RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 PSMC2P35998 433 aaKnown RBP15.15■□□□□ 0.02
BRAT1-203ENST00000467558 YWHAEP62258 255 aaKnown RBP15.15■□□□□ 0.02
BRAT1-203ENST00000467558 H2AFVQ71UI9 128 aa15.15■□□□□ 0.02
BRAT1-203ENST00000467558 CCDC25Q86WR0 208 aa15.15■□□□□ 0.02
BRAT1-203ENST00000467558 SRBD1Q8N5C6 995 aaKnown RBP15.15■□□□□ 0.02
BRAT1-203ENST00000467558 KCNB2Q92953 911 aa15.15■□□□□ 0.02
BRAT1-203ENST00000467558 MAK16Q9BXY0 300 aaKnown RBP15.15■□□□□ 0.02
BRAT1-203ENST00000467558 C1orf112Q9NSG2 853 aa15.15■□□□□ 0.02
BRAT1-203ENST00000467558 KIF28PB7ZC32 967 aa15.14■□□□□ 0.01
BRAT1-203ENST00000467558 CACNB1Q02641 598 aaPredicted RBP15.14■□□□□ 0.01
BRAT1-203ENST00000467558 EN1Q05925 392 aaPredicted RBP15.14■□□□□ 0.01
BRAT1-203ENST00000467558 SPZ1Q9BXG8 430 aa15.14■□□□□ 0.01
BRAT1-203ENST00000467558 TLDC2A0PJX2 215 aa15.14■□□□□ 0.01
BRAT1-203ENST00000467558 RBL2Q08999 1139 aa15.14■□□□□ 0.01
BRAT1-203ENST00000467558 PARVGQ9HBI0 331 aa15.14■□□□□ 0.01
BRAT1-203ENST00000467558 PCDHA6Q9UN73 950 aa15.14■□□□□ 0.01
BRAT1-203ENST00000467558 PCDHA8Q9Y5H6 950 aa15.14■□□□□ 0.01
BRAT1-203ENST00000467558 POMGNT1Q8WZA1 660 aa15.14■□□□□ 0.01
BRAT1-203ENST00000467558 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.14■□□□□ 0.01
BRAT1-203ENST00000467558 ZNF277Q9NRM2 450 aaPredicted RBP15.14■□□□□ 0.01
BRAT1-203ENST00000467558 VPS18Q9P253 973 aa15.14■□□□□ 0.01
BRAT1-203ENST00000467558 AMFRQ9UKV5 643 aa15.14■□□□□ 0.01
BRAT1-203ENST00000467558 UTP11Q9Y3A2 253 aaKnown RBP15.14■□□□□ 0.01
BRAT1-203ENST00000467558 FLT1P17948 1338 aa15.14■□□□□ 0.01
BRAT1-203ENST00000467558 USP17L15C9J2P7 530 aa15.14■□□□□ 0.01
BRAT1-203ENST00000467558 USP17L13C9JLJ4 530 aa15.14■□□□□ 0.01
BRAT1-203ENST00000467558 USP17L11C9JVI0 530 aa15.14■□□□□ 0.01
BRAT1-203ENST00000467558 USP17L18D6R9N7 530 aa15.14■□□□□ 0.01
BRAT1-203ENST00000467558 USP17L22D6RA61 530 aa15.14■□□□□ 0.01
BRAT1-203ENST00000467558 USP17L17D6RBQ6 530 aa15.14■□□□□ 0.01
BRAT1-203ENST00000467558 USP17L19D6RCP7 530 aa15.14■□□□□ 0.01
BRAT1-203ENST00000467558 USP17L20D6RJB6 530 aa15.14■□□□□ 0.01
BRAT1-203ENST00000467558 HNRNPDLO14979 420 aaKnown RBP15.14■□□□□ 0.01
BRAT1-203ENST00000467558 TCP1P17987 556 aaKnown RBP15.14■□□□□ 0.01
BRAT1-203ENST00000467558 GUCY1A2P33402 732 aa15.14■□□□□ 0.01
BRAT1-203ENST00000467558 USP17L24Q0WX57 530 aa15.14■□□□□ 0.01
BRAT1-203ENST00000467558 USP17L6PQ6QN14 398 aa15.14■□□□□ 0.01
BRAT1-203ENST00000467558 FAM186BQ8IYM0 893 aa15.14■□□□□ 0.01
BRAT1-203ENST00000467558 PPM1KQ8N3J5 372 aa15.14■□□□□ 0.01
BRAT1-203ENST00000467558 GPR161Q8N6U8 529 aaKnown RBP15.14■□□□□ 0.01
BRAT1-203ENST00000467558 IQCGQ9H095 443 aaKnown RBP15.14■□□□□ 0.01
BRAT1-203ENST00000467558 AGTPBP1Q9UPW5 1226 aa15.14■□□□□ 0.01
BRAT1-203ENST00000467558 IFT172Q9UG01 1749 aa15.13■□□□□ 0.01
BRAT1-203ENST00000467558 P4HA1P13674 534 aa15.13■□□□□ 0.01
BRAT1-203ENST00000467558 CAPN2P17655 700 aa15.13■□□□□ 0.01
BRAT1-203ENST00000467558 DDIT3P35638 169 aa15.13■□□□□ 0.01
BRAT1-203ENST00000467558 FAM83BQ5T0W9 1011 aa15.13■□□□□ 0.01
BRAT1-203ENST00000467558 ZNF365Q70YC5 407 aa15.13■□□□□ 0.01
BRAT1-203ENST00000467558 STAG2Q8N3U4 1231 aa15.13■□□□□ 0.01
BRAT1-203ENST00000467558 PRPF6O94906 941 aaKnown RBP15.13■□□□□ 0.01
BRAT1-203ENST00000467558 DLATP10515 647 aaKnown RBP15.13■□□□□ 0.01
BRAT1-203ENST00000467558 CASP7P55210 303 aa15.13■□□□□ 0.01
BRAT1-203ENST00000467558 FAM20AQ96MK3 541 aa15.13■□□□□ 0.01
BRAT1-203ENST00000467558 BPIFA3Q9BQP9 254 aa15.13■□□□□ 0.01
BRAT1-203ENST00000467558 JPH2Q9BR39 696 aaPredicted RBP15.13■□□□□ 0.01
BRAT1-203ENST00000467558 OSBPL5Q9H0X9 879 aaPredicted RBP15.13■□□□□ 0.01
BRAT1-203ENST00000467558 BHMT2Q9H2M3 363 aa15.13■□□□□ 0.01
BRAT1-203ENST00000467558 TMEM206Q9H813 350 aa15.13■□□□□ 0.01
BRAT1-203ENST00000467558 ZNF215Q9UL58 517 aaPredicted RBP15.13■□□□□ 0.01
BRAT1-203ENST00000467558 HYOU1Q9Y4L1 999 aa15.13■□□□□ 0.01
BRAT1-203ENST00000467558 SORBS3O60504 671 aa15.13■□□□□ 0.01
BRAT1-203ENST00000467558 ZBTB7AO95365 584 aa15.13■□□□□ 0.01
BRAT1-203ENST00000467558 TMOD1P28289 359 aa15.13■□□□□ 0.01
BRAT1-203ENST00000467558 CCND2P30279 289 aa15.13■□□□□ 0.01
BRAT1-203ENST00000467558 CHRNA5P30532 468 aa15.13■□□□□ 0.01
BRAT1-203ENST00000467558 QRICH1Q2TAL8 776 aa15.13■□□□□ 0.01
BRAT1-203ENST00000467558 UNC13DQ70J99 1090 aa15.13■□□□□ 0.01
BRAT1-203ENST00000467558 ATRIPQ8WXE1 791 aa15.13■□□□□ 0.01
BRAT1-203ENST00000467558 MTMR4Q9NYA4 1195 aa15.13■□□□□ 0.01
BRAT1-203ENST00000467558 AFPP02771 609 aaKnown RBP15.12■□□□□ 0.01
BRAT1-203ENST00000467558 EIF2AK2P19525 551 aaKnown RBP15.12■□□□□ 0.01
BRAT1-203ENST00000467558 ABCB4P21439 1286 aa15.12■□□□□ 0.01
BRAT1-203ENST00000467558 IREB2P48200 963 aaKnown RBP15.12■□□□□ 0.01
BRAT1-203ENST00000467558 SNAP25P60880 206 aa15.12■□□□□ 0.01
BRAT1-203ENST00000467558 ATP2C1P98194 919 aaPredicted RBP15.12■□□□□ 0.01
BRAT1-203ENST00000467558 CUL4BQ13620 913 aa15.12■□□□□ 0.01
BRAT1-203ENST00000467558 HHIPL2Q6UWX4 724 aa15.12■□□□□ 0.01
BRAT1-203ENST00000467558 PPP1R13BQ96KQ4 1090 aa15.12■□□□□ 0.01
BRAT1-203ENST00000467558 CEP170P1Q96L14 293 aa15.12■□□□□ 0.01
BRAT1-203ENST00000467558 ACCSQ96QU6 501 aa15.12■□□□□ 0.01
BRAT1-203ENST00000467558 SPC25Q9HBM1 224 aa15.12■□□□□ 0.01
BRAT1-203ENST00000467558 MYO1AQ9UBC5 1043 aa15.12■□□□□ 0.01
BRAT1-203ENST00000467558 SEPT9Q9UHD8 586 aaPredicted RBP15.12■□□□□ 0.01
BRAT1-203ENST00000467558 FEM1BQ9UK73 627 aa15.12■□□□□ 0.01
BRAT1-203ENST00000467558 ATP2A2P16615 1042 aaKnown RBP15.12■□□□□ 0.01
BRAT1-203ENST00000467558 ZBED6P86452 979 aa15.12■□□□□ 0.01
BRAT1-203ENST00000467558 ARHGAP4P98171 946 aa15.12■□□□□ 0.01
BRAT1-203ENST00000467558 SHC4Q6S5L8 630 aa15.12■□□□□ 0.01
BRAT1-203ENST00000467558 DHX37Q8IY37 1157 aaKnown RBP15.12■□□□□ 0.01
BRAT1-203ENST00000467558 ADGRF4Q8IZF3 695 aa15.12■□□□□ 0.01
BRAT1-203ENST00000467558 M0QZ92 97 aa15.12■□□□□ 0.01
BRAT1-203ENST00000467558 IVLP07476 585 aa15.12■□□□□ 0.01
BRAT1-203ENST00000467558 OSBPP22059 807 aa15.12■□□□□ 0.01
BRAT1-203ENST00000467558 PPP4R3CPQ6ZMV5 832 aa15.12■□□□□ 0.01
BRAT1-203ENST00000467558 UBLCP1Q8WVY7 318 aaPredicted RBP15.12■□□□□ 0.01
BRAT1-203ENST00000467558 ADPGKQ9BRR6 497 aa15.12■□□□□ 0.01
BRAT1-203ENST00000467558 BCL2L12Q9HB09 334 aa15.12■□□□□ 0.01
BRAT1-203ENST00000467558 GDAQ9Y2T3 454 aa15.12■□□□□ 0.01
BRAT1-203ENST00000467558 PAK2Q13177 524 aa15.12■□□□□ 0.01
BRAT1-203ENST00000467558 DAAM2Q86T65 1068 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms