RNA–Protein interactions for RNA: ENST00000456369.5

CHEK2-221, Transcript of checkpoint kinase 2, human

TSL 3

Gene CHEK2, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-221	ENST00000456369	CCDC196	A0A1B0GTZ2	297 aa		11.47	□□□□□ -0.57
CHEK2-221	ENST00000456369	hCG_1642624	A0A1W2PR95	340 aa		11.47	□□□□□ -0.57
CHEK2-221	ENST00000456369	ASB14	A6NK59	587 aa		11.47	□□□□□ -0.57
CHEK2-221	ENST00000456369	TFRC	P02786	760 aa	Known RBP	11.47	□□□□□ -0.57
CHEK2-221	ENST00000456369	CNGA1	P29973	690 aa		11.47	□□□□□ -0.57
CHEK2-221	ENST00000456369	ALDH5A1	P51649	535 aa	Predicted RBP	11.47	□□□□□ -0.57
CHEK2-221	ENST00000456369	ACVR2B	Q13705	512 aa		11.47	□□□□□ -0.57
CHEK2-221	ENST00000456369	NTRK3	Q16288	839 aa		11.47	□□□□□ -0.57
CHEK2-221	ENST00000456369	SAMD3	Q8N6K7	520 aa		11.47	□□□□□ -0.57
CHEK2-221	ENST00000456369	ANKLE1	Q8NAG6	615 aa		11.47	□□□□□ -0.57
CHEK2-221	ENST00000456369	ZNF274	Q96GC6	653 aa	Predicted RBP	11.47	□□□□□ -0.57
CHEK2-221	ENST00000456369	INTS4	Q96HW7	963 aa	Known RBP	11.47	□□□□□ -0.57
CHEK2-221	ENST00000456369	ADAM33	Q9BZ11	813 aa		11.47	□□□□□ -0.57
CHEK2-221	ENST00000456369	ADD3	Q9UEY8	706 aa	Known RBP	11.47	□□□□□ -0.57
CHEK2-221	ENST00000456369	SEC63	Q9UGP8	760 aa	Known RBP	11.47	□□□□□ -0.57
CHEK2-221	ENST00000456369		V9GY48	417 aa	Predicted RBP	11.47	□□□□□ -0.57
CHEK2-221	ENST00000456369	ADCY6	O43306	1168 aa		11.46	□□□□□ -0.57
CHEK2-221	ENST00000456369	CFB	P00751	764 aa		11.46	□□□□□ -0.57
CHEK2-221	ENST00000456369	PTMS	P20962	102 aa		11.46	□□□□□ -0.57
CHEK2-221	ENST00000456369	NUCB2	P80303	420 aa		11.46	□□□□□ -0.57
CHEK2-221	ENST00000456369	CUL4A	Q13619	759 aa		11.46	□□□□□ -0.57
CHEK2-221	ENST00000456369	TAPT1	Q6NXT6	567 aa		11.46	□□□□□ -0.57
CHEK2-221	ENST00000456369	TAAR1	Q96RJ0	339 aa		11.46	□□□□□ -0.57
CHEK2-221	ENST00000456369	SMCHD1	A6NHR9	2005 aa		11.45	□□□□□ -0.58
CHEK2-221	ENST00000456369	PIK3CD	O00329	1044 aa		11.45	□□□□□ -0.58
CHEK2-221	ENST00000456369	MEIS2	O14770	477 aa		11.45	□□□□□ -0.58
CHEK2-221	ENST00000456369	COL6A1	P12109	1028 aa		11.45	□□□□□ -0.58
CHEK2-221	ENST00000456369	AKR1A1	P14550	325 aa		11.45	□□□□□ -0.58
CHEK2-221	ENST00000456369	HOXA13	P31271	388 aa	Predicted RBP	11.45	□□□□□ -0.58
CHEK2-221	ENST00000456369	AK2	P54819	239 aa		11.45	□□□□□ -0.58
CHEK2-221	ENST00000456369	NKX3-2	P78367	333 aa		11.45	□□□□□ -0.58
CHEK2-221	ENST00000456369	MLLT1	Q03111	559 aa	Predicted RBP	11.45	□□□□□ -0.58
CHEK2-221	ENST00000456369	CCDC144B	Q3MJ40	725 aa		11.45	□□□□□ -0.58
CHEK2-221	ENST00000456369	ANO1	Q5XXA6	986 aa		11.45	□□□□□ -0.58
CHEK2-221	ENST00000456369	WWC2	Q6AWC2	1192 aa		11.45	□□□□□ -0.58
CHEK2-221	ENST00000456369	SMYD5	Q6GMV2	418 aa		11.45	□□□□□ -0.58
CHEK2-221	ENST00000456369	NSUN6	Q8TEA1	469 aa	Known RBP	11.45	□□□□□ -0.58
CHEK2-221	ENST00000456369	DIS3L	Q8TF46	1054 aa	Known RBP	11.45	□□□□□ -0.58
CHEK2-221	ENST00000456369	LENG1	Q96BZ8	264 aa	Predicted RBP	11.45	□□□□□ -0.58
CHEK2-221	ENST00000456369	RMDN3	Q96TC7	470 aa		11.45	□□□□□ -0.58
CHEK2-221	ENST00000456369	NCOA5	Q9HCD5	579 aa	Known RBP	11.45	□□□□□ -0.58
CHEK2-221	ENST00000456369	VTA1	Q9NP79	307 aa		11.45	□□□□□ -0.58
CHEK2-221	ENST00000456369	PDGFC	Q9NRA1	345 aa		11.45	□□□□□ -0.58
CHEK2-221	ENST00000456369	ZHX1	Q9UKY1	873 aa	Predicted RBP	11.45	□□□□□ -0.58
CHEK2-221	ENST00000456369	FAM184B	Q9ULE4	1060 aa		11.45	□□□□□ -0.58
CHEK2-221	ENST00000456369	TPCN1	Q9ULQ1	816 aa		11.45	□□□□□ -0.58
CHEK2-221	ENST00000456369	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.45	□□□□□ -0.58
CHEK2-221	ENST00000456369	MYH15	Q9Y2K3	1946 aa		11.45	□□□□□ -0.58
CHEK2-221	ENST00000456369	FRMPD4	Q14CM0	1322 aa		11.44	□□□□□ -0.58
CHEK2-221	ENST00000456369	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	11.44	□□□□□ -0.58
CHEK2-221	ENST00000456369	RBM47	A0AV96	593 aa	Known RBP	11.44	□□□□□ -0.58
CHEK2-221	ENST00000456369	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.44	□□□□□ -0.58
CHEK2-221	ENST00000456369	ARHGAP33	O14559	1287 aa		11.44	□□□□□ -0.58
CHEK2-221	ENST00000456369	MAP3K7	O43318	606 aa		11.44	□□□□□ -0.58
CHEK2-221	ENST00000456369	ADAMTS4	O75173	837 aa		11.44	□□□□□ -0.58
CHEK2-221	ENST00000456369	FARP2	O94887	1054 aa	Predicted RBP	11.44	□□□□□ -0.58
CHEK2-221	ENST00000456369	POLR2M	P0CAP2	368 aa		11.44	□□□□□ -0.58
CHEK2-221	ENST00000456369	RARB	P10826	455 aa		11.44	□□□□□ -0.58
CHEK2-221	ENST00000456369	IFNAR1	P17181	557 aa		11.44	□□□□□ -0.58
CHEK2-221	ENST00000456369	CCT2	P78371	535 aa	Known RBP	11.44	□□□□□ -0.58
CHEK2-221	ENST00000456369	PKN1	Q16512	942 aa		11.44	□□□□□ -0.58
CHEK2-221	ENST00000456369	PFKFB3	Q16875	520 aa	Predicted RBP	11.44	□□□□□ -0.58
CHEK2-221	ENST00000456369	TMEM63B	Q5T3F8	832 aa		11.44	□□□□□ -0.58
CHEK2-221	ENST00000456369	EEPD1	Q7L9B9	569 aa		11.44	□□□□□ -0.58
CHEK2-221	ENST00000456369	FBXO16	Q8IX29	292 aa	Predicted RBP	11.44	□□□□□ -0.58
CHEK2-221	ENST00000456369	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.44	□□□□□ -0.58
CHEK2-221	ENST00000456369	TMX3	Q96JJ7	454 aa		11.44	□□□□□ -0.58
CHEK2-221	ENST00000456369	GBP4	Q96PP9	640 aa		11.44	□□□□□ -0.58
CHEK2-221	ENST00000456369	IWS1	Q96ST2	819 aa		11.44	□□□□□ -0.58
CHEK2-221	ENST00000456369	PXMP2	Q9NR77	195 aa		11.44	□□□□□ -0.58
CHEK2-221	ENST00000456369	BARHL2	Q9NY43	387 aa		11.44	□□□□□ -0.58
CHEK2-221	ENST00000456369	GNE	Q9Y223	722 aa	Known RBP	11.44	□□□□□ -0.58
CHEK2-221	ENST00000456369	LCT	P09848	1927 aa		11.43	□□□□□ -0.58
CHEK2-221	ENST00000456369	DDX11L8	A8MPP1	907 aa		11.43	□□□□□ -0.58
CHEK2-221	ENST00000456369	hCG_1984214	I3L0E3	225 aa		11.43	□□□□□ -0.58
CHEK2-221	ENST00000456369	STXBP3	O00186	592 aa		11.43	□□□□□ -0.58
CHEK2-221	ENST00000456369	DNM1L	O00429	736 aa		11.43	□□□□□ -0.58
CHEK2-221	ENST00000456369	CTAGE5	O15320	804 aa		11.43	□□□□□ -0.58
CHEK2-221	ENST00000456369	PRPF3	O43395	683 aa	Known RBP	11.43	□□□□□ -0.58
CHEK2-221	ENST00000456369	DUSP11	O75319	330 aa	Known RBP	11.43	□□□□□ -0.58
CHEK2-221	ENST00000456369	EIF2AK2	P19525	551 aa	Known RBP	11.43	□□□□□ -0.58
CHEK2-221	ENST00000456369	PBX2	P40425	430 aa		11.43	□□□□□ -0.58
CHEK2-221	ENST00000456369	ADCYAP1R1	P41586	468 aa		11.43	□□□□□ -0.58
CHEK2-221	ENST00000456369	SCRN1	Q12765	414 aa		11.43	□□□□□ -0.58
CHEK2-221	ENST00000456369	ANKRD1	Q15327	319 aa		11.43	□□□□□ -0.58
CHEK2-221	ENST00000456369	CCSAP	Q6IQ19	270 aa	Predicted RBP	11.43	□□□□□ -0.58
CHEK2-221	ENST00000456369	USP17L6P	Q6QN14	398 aa		11.43	□□□□□ -0.58
CHEK2-221	ENST00000456369	CLEC17A	Q6ZS10	378 aa		11.43	□□□□□ -0.58
CHEK2-221	ENST00000456369	HEATR3	Q7Z4Q2	680 aa		11.43	□□□□□ -0.58
CHEK2-221	ENST00000456369	TEX2	Q8IWB9	1127 aa		11.43	□□□□□ -0.58
CHEK2-221	ENST00000456369	ZNF713	Q8N859	430 aa	Predicted RBP	11.43	□□□□□ -0.58
CHEK2-221	ENST00000456369	PHKB	Q93100	1093 aa		11.43	□□□□□ -0.58
CHEK2-221	ENST00000456369	PAWR	Q96IZ0	340 aa	Known RBP	11.43	□□□□□ -0.58
CHEK2-221	ENST00000456369	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.43	□□□□□ -0.58
CHEK2-221	ENST00000456369	KCNK17	Q96T54	332 aa		11.43	□□□□□ -0.58
CHEK2-221	ENST00000456369	PDCD2L	Q9BRP1	358 aa		11.43	□□□□□ -0.58
CHEK2-221	ENST00000456369	RNF26	Q9BY78	433 aa	Predicted RBP	11.43	□□□□□ -0.58
CHEK2-221	ENST00000456369	PSTPIP2	Q9H939	334 aa		11.43	□□□□□ -0.58
CHEK2-221	ENST00000456369	XPNPEP3	Q9NQH7	507 aa		11.43	□□□□□ -0.58
CHEK2-221	ENST00000456369	PCDH10	Q9P2E7	1040 aa		11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 114 ms