RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 AIDAQ96BJ3 306 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 SLC4A9Q96Q91 983 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 GSDMAQ96QA5 445 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 HAUS4Q9H6D7 363 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 SAMSN1Q9NSI8 373 aaKnown RBP8.99□□□□□ -0.97
VTI1A-202ENST00000432306 LIMA1Q9UHB6 759 aaKnown RBP8.99□□□□□ -0.97
VTI1A-202ENST00000432306 HPCAL4Q9UM19 191 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 MYO6Q9UM54 1294 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 ARFGEF2Q9Y6D5 1785 aa8.98□□□□□ -0.97
VTI1A-202ENST00000432306 CDHR2Q9BYE9 1310 aa8.98□□□□□ -0.97
VTI1A-202ENST00000432306 SNRPA1P09661 255 aaKnown RBP8.98□□□□□ -0.97
VTI1A-202ENST00000432306 FAM200BP0CF97 657 aa8.98□□□□□ -0.97
VTI1A-202ENST00000432306 IFNAR1P17181 557 aa8.98□□□□□ -0.97
VTI1A-202ENST00000432306 CTCFP49711 727 aaPredicted RBP8.98□□□□□ -0.97
VTI1A-202ENST00000432306 METAP2P50579 478 aaKnown RBP eCLIP8.98□□□□□ -0.97
VTI1A-202ENST00000432306 DDR1Q08345 913 aa8.98□□□□□ -0.97
VTI1A-202ENST00000432306 AIMP1Q12904 312 aaKnown RBP8.98□□□□□ -0.97
VTI1A-202ENST00000432306 PPP2R5AQ15172 486 aa8.98□□□□□ -0.97
VTI1A-202ENST00000432306 ALX1Q15699 326 aa8.98□□□□□ -0.97
VTI1A-202ENST00000432306 ZNF569Q5MCW4 686 aa8.98□□□□□ -0.97
VTI1A-202ENST00000432306 SLC9C2Q5TAH2 1124 aa8.98□□□□□ -0.97
VTI1A-202ENST00000432306 EMC10Q5UCC4 262 aa8.98□□□□□ -0.97
VTI1A-202ENST00000432306 ISM2Q6H9L7 571 aa8.98□□□□□ -0.97
VTI1A-202ENST00000432306 CYP26C1Q6V0L0 522 aa8.98□□□□□ -0.97
VTI1A-202ENST00000432306 CHST3Q7LGC8 479 aa8.98□□□□□ -0.97
VTI1A-202ENST00000432306 PPFIBP1Q86W92 1011 aa8.98□□□□□ -0.97
VTI1A-202ENST00000432306 OTUD6BQ8N6M0 293 aa8.98□□□□□ -0.97
VTI1A-202ENST00000432306 CCDC148Q8NFR7 591 aa8.98□□□□□ -0.97
VTI1A-202ENST00000432306 CLIC6Q96NY7 704 aa8.98□□□□□ -0.97
VTI1A-202ENST00000432306 ZNF700Q9H0M5 742 aa8.98□□□□□ -0.97
VTI1A-202ENST00000432306 DEF6Q9H4E7 631 aa8.98□□□□□ -0.97
VTI1A-202ENST00000432306 ARNT2Q9HBZ2 717 aa8.98□□□□□ -0.97
VTI1A-202ENST00000432306 GJB4Q9NTQ9 266 aa8.98□□□□□ -0.97
VTI1A-202ENST00000432306 AATFQ9NY61 560 aaKnown RBP eCLIP8.98□□□□□ -0.97
VTI1A-202ENST00000432306 CTDP1Q9Y5B0 961 aaPredicted RBP8.98□□□□□ -0.97
VTI1A-202ENST00000432306 UBN2Q6ZU65 1347 aa8.98□□□□□ -0.97
VTI1A-202ENST00000432306 A0A087WZG4 1122 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 CCDC163A0A0D9SF12 145 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 ANO9A1A5B4 782 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 BHMG1C9JSJ3 638 aaPredicted RBP8.97□□□□□ -0.97
VTI1A-202ENST00000432306 ZNF213O14771 459 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 FOXN1O15353 648 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 ZEB2O60315 1214 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 FMNL1O95466 1100 aaPredicted RBP8.97□□□□□ -0.97
VTI1A-202ENST00000432306 MMP1P03956 469 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 FGRP09769 529 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 EPB41P11171 864 aaKnown RBP8.97□□□□□ -0.97
VTI1A-202ENST00000432306 TOB1P50616 345 aaPredicted RBP8.97□□□□□ -0.97
VTI1A-202ENST00000432306 ZNF211Q13398 564 aaPredicted RBP8.97□□□□□ -0.97
VTI1A-202ENST00000432306 SERINC3Q13530 473 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 FILIP1LQ4L180 1135 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 LMBR1LQ6UX01 489 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 SPATS2Q86XZ4 545 aaKnown RBP8.97□□□□□ -0.97
VTI1A-202ENST00000432306 IGDCC4Q8TDY8 1250 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 SH3GL2Q99962 352 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.97□□□□□ -0.97
VTI1A-202ENST00000432306 SUGCTQ9HAC7 445 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 LZTFL1Q9NQ48 299 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 HOMER2Q9NSB8 354 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 ABHD10Q9NUJ1 306 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 PUF60Q9UHX1 559 aaKnown RBP8.97□□□□□ -0.97
VTI1A-202ENST00000432306 CEP131Q9UPN4 1083 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 SCN11AQ9UI33 1791 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 NRXN2Q9P2S2 1712 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 SRRM3A6NNA2 597 aaPredicted RBP8.97□□□□□ -0.97
VTI1A-202ENST00000432306 POLRMTO00411 1230 aaKnown RBP8.97□□□□□ -0.97
VTI1A-202ENST00000432306 TBX3O15119 743 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 TEX33O43247 280 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 USP8P40818 1118 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 IARSP41252 1262 aaKnown RBP8.97□□□□□ -0.97
VTI1A-202ENST00000432306 PIP4K2AP48426 406 aaPredicted RBP8.97□□□□□ -0.97
VTI1A-202ENST00000432306 ERVK-24P63145 666 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 CKAP4Q07065 602 aaKnown RBP8.97□□□□□ -0.97
VTI1A-202ENST00000432306 TRDNQ13061 729 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 TRIM29Q14134 588 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 TMEM95Q3KNT9 176 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 SAMD7Q7Z3H4 446 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 TTLL6Q8N841 843 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 NOA1Q8NC60 698 aaKnown RBP8.97□□□□□ -0.97
VTI1A-202ENST00000432306 EHBP1Q8NDI1 1231 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 NBPF3Q9H094 633 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 SRP68Q9UHB9 627 aaKnown RBP8.97□□□□□ -0.97
VTI1A-202ENST00000432306 SERTAD1Q9UHV2 236 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 TJP1Q07157 1748 aa8.97□□□□□ -0.97
VTI1A-202ENST00000432306 LAMB4A4D0S4 1761 aa8.96□□□□□ -0.97
VTI1A-202ENST00000432306 FER1L6Q2WGJ9 1857 aa8.96□□□□□ -0.97
VTI1A-202ENST00000432306 SCN4AP35499 1836 aa8.96□□□□□ -0.98
VTI1A-202ENST00000432306 A0A1W2PQC6 194 aa8.96□□□□□ -0.98
VTI1A-202ENST00000432306 AGPSO00116 658 aa8.96□□□□□ -0.98
VTI1A-202ENST00000432306 C21orf2O43822 256 aa8.96□□□□□ -0.98
VTI1A-202ENST00000432306 SORBS3O60504 671 aa8.96□□□□□ -0.98
VTI1A-202ENST00000432306 RANBP6O60518 1105 aaKnown RBP8.96□□□□□ -0.98
VTI1A-202ENST00000432306 ZPR1O75312 459 aa8.96□□□□□ -0.98
VTI1A-202ENST00000432306 BMP15O95972 392 aa8.96□□□□□ -0.98
VTI1A-202ENST00000432306 MYL1P05976 194 aa8.96□□□□□ -0.98
VTI1A-202ENST00000432306 TM4SF1P30408 202 aa8.96□□□□□ -0.98
VTI1A-202ENST00000432306 CASP14P31944 242 aa8.96□□□□□ -0.98
VTI1A-202ENST00000432306 CRKLP46109 303 aaKnown RBP8.96□□□□□ -0.98
VTI1A-202ENST00000432306 FXR1P51114 621 aaKnown RBP eCLIP8.96□□□□□ -0.98
VTI1A-202ENST00000432306 SKOR1P84550 965 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms