RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 DDX42Q86XP3 938 aaKnown RBP eCLIP14.59□□□□□ -0.07
NFKB1-202ENST00000394820 COA7Q96BR5 231 aa14.59□□□□□ -0.07
NFKB1-202ENST00000394820 CNTNAP5Q8WYK1 1306 aa14.59□□□□□ -0.07
NFKB1-202ENST00000394820 DDAH1O94760 285 aa14.59□□□□□ -0.07
NFKB1-202ENST00000394820 LDHCP07864 332 aa14.59□□□□□ -0.07
NFKB1-202ENST00000394820 GPSM2P81274 684 aa14.59□□□□□ -0.07
NFKB1-202ENST00000394820 STK4Q13043 487 aa14.59□□□□□ -0.07
NFKB1-202ENST00000394820 CFAP221Q4G0U5 840 aa14.59□□□□□ -0.07
NFKB1-202ENST00000394820 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.59□□□□□ -0.07
NFKB1-202ENST00000394820 MED15Q96RN5 788 aa14.59□□□□□ -0.07
NFKB1-202ENST00000394820 TMEM60Q9H2L4 133 aa14.59□□□□□ -0.07
NFKB1-202ENST00000394820 RWDD2AQ9UIY3 292 aa14.59□□□□□ -0.07
NFKB1-202ENST00000394820 GGA1Q9UJY5 639 aa14.59□□□□□ -0.07
NFKB1-202ENST00000394820 FAM205AQ6ZU69 1335 aa14.59□□□□□ -0.07
NFKB1-202ENST00000394820 ZNF18P17022 549 aa14.59□□□□□ -0.07
NFKB1-202ENST00000394820 TCP10Q12799 353 aa14.59□□□□□ -0.07
NFKB1-202ENST00000394820 IFT20Q8IY31 132 aa14.59□□□□□ -0.07
NFKB1-202ENST00000394820 FAM133AQ8N9E0 248 aa14.59□□□□□ -0.07
NFKB1-202ENST00000394820 TRIM58Q8NG06 486 aa14.59□□□□□ -0.07
NFKB1-202ENST00000394820 PCDHB13Q9Y5F0 798 aa14.59□□□□□ -0.07
NFKB1-202ENST00000394820 POTEMA6NI47 508 aa14.58□□□□□ -0.08
NFKB1-202ENST00000394820 NEFHP12036 1026 aa14.58□□□□□ -0.08
NFKB1-202ENST00000394820 PCDHA13Q9Y5I0 950 aa14.58□□□□□ -0.08
NFKB1-202ENST00000394820 COL1A1P02452 1464 aaPredicted RBP14.58□□□□□ -0.08
NFKB1-202ENST00000394820 NUP188Q5SRE5 1749 aa14.58□□□□□ -0.08
NFKB1-202ENST00000394820 NWD2Q9ULI1 1742 aa14.58□□□□□ -0.08
NFKB1-202ENST00000394820 ATRNO75882 1429 aa14.58□□□□□ -0.08
NFKB1-202ENST00000394820 XDHP47989 1333 aa14.58□□□□□ -0.08
NFKB1-202ENST00000394820 CHMP2AO43633 222 aa14.58□□□□□ -0.08
NFKB1-202ENST00000394820 VPS41P49754 854 aa14.58□□□□□ -0.08
NFKB1-202ENST00000394820 MSL1Q68DK7 614 aa14.58□□□□□ -0.08
NFKB1-202ENST00000394820 ANKRD40Q6AI12 368 aa14.58□□□□□ -0.08
NFKB1-202ENST00000394820 TMEM47Q9BQJ4 181 aa14.58□□□□□ -0.08
NFKB1-202ENST00000394820 HPCAL4Q9UM19 191 aa14.58□□□□□ -0.08
NFKB1-202ENST00000394820 TAF1P21675 1872 aa14.58□□□□□ -0.08
NFKB1-202ENST00000394820 SLIT2O94813 1529 aa14.58□□□□□ -0.08
NFKB1-202ENST00000394820 GSTTP1A0A1W2PQM5 241 aa14.57□□□□□ -0.08
NFKB1-202ENST00000394820 LRRC53A6NM62 1247 aa14.57□□□□□ -0.08
NFKB1-202ENST00000394820 FAM196BA6NMK8 535 aa14.57□□□□□ -0.08
NFKB1-202ENST00000394820 CLTAP09496 248 aa14.57□□□□□ -0.08
NFKB1-202ENST00000394820 IRAK1P51617 712 aa14.57□□□□□ -0.08
NFKB1-202ENST00000394820 TXNRD1Q16881 649 aa14.57□□□□□ -0.08
NFKB1-202ENST00000394820 P2RX5Q93086 422 aa14.57□□□□□ -0.08
NFKB1-202ENST00000394820 IL17RBQ9NRM6 502 aa14.57□□□□□ -0.08
NFKB1-202ENST00000394820 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.57□□□□□ -0.08
NFKB1-202ENST00000394820 CAPN6Q9Y6Q1 641 aa14.57□□□□□ -0.08
NFKB1-202ENST00000394820 TRIM37O94972 964 aa14.57□□□□□ -0.08
NFKB1-202ENST00000394820 SERPINB2P05120 415 aa14.57□□□□□ -0.08
NFKB1-202ENST00000394820 TUBBP07437 444 aa14.57□□□□□ -0.08
NFKB1-202ENST00000394820 CACNB3P54284 484 aa14.57□□□□□ -0.08
NFKB1-202ENST00000394820 SLC9C1Q4G0N8 1177 aa14.57□□□□□ -0.08
NFKB1-202ENST00000394820 KLHL34Q8N239 644 aa14.57□□□□□ -0.08
NFKB1-202ENST00000394820 ZNF622Q969S3 477 aaKnown RBP eCLIP14.57□□□□□ -0.08
NFKB1-202ENST00000394820 C6orf50Q9HD87 102 aa14.57□□□□□ -0.08
NFKB1-202ENST00000394820 MLXIPLQ9NP71 852 aa14.57□□□□□ -0.08
NFKB1-202ENST00000394820 KCNK9Q9NPC2 374 aa14.57□□□□□ -0.08
NFKB1-202ENST00000394820 DNAJC17Q9NVM6 304 aaKnown RBP14.57□□□□□ -0.08
NFKB1-202ENST00000394820 A0A087WUV0 522 aaPredicted RBP14.57□□□□□ -0.08
NFKB1-202ENST00000394820 GOLGA6L10A0A0M3HER8 536 aa14.57□□□□□ -0.08
NFKB1-202ENST00000394820 PDE2AO00408 941 aaPredicted RBP14.57□□□□□ -0.08
NFKB1-202ENST00000394820 KCNJ6P48051 423 aa14.57□□□□□ -0.08
NFKB1-202ENST00000394820 CARSP49589 748 aaKnown RBP14.57□□□□□ -0.08
NFKB1-202ENST00000394820 MDM2Q00987 491 aaPredicted RBP14.57□□□□□ -0.08
NFKB1-202ENST00000394820 CYP4A11Q02928 519 aa14.57□□□□□ -0.08
NFKB1-202ENST00000394820 ARHGAP44Q17R89 818 aa14.57□□□□□ -0.08
NFKB1-202ENST00000394820 SPATA4Q8NEY3 305 aa14.57□□□□□ -0.08
NFKB1-202ENST00000394820 THOC1Q96FV9 657 aaKnown RBP14.57□□□□□ -0.08
NFKB1-202ENST00000394820 LBHD1Q9BQE6 289 aaPredicted RBP14.57□□□□□ -0.08
NFKB1-202ENST00000394820 TMX4Q9H1E5 349 aaPredicted RBP14.57□□□□□ -0.08
NFKB1-202ENST00000394820 DISC1Q9NRI5 854 aa14.57□□□□□ -0.08
NFKB1-202ENST00000394820 GSTO1P78417 241 aa14.56□□□□□ -0.08
NFKB1-202ENST00000394820 GRAPQ13588 217 aa14.56□□□□□ -0.08
NFKB1-202ENST00000394820 PFKFB3Q16875 520 aaPredicted RBP14.56□□□□□ -0.08
NFKB1-202ENST00000394820 C12orf60Q5U649 245 aa14.56□□□□□ -0.08
NFKB1-202ENST00000394820 CCDC91Q7Z6B0 441 aa14.56□□□□□ -0.08
NFKB1-202ENST00000394820 GRAPLQ8TC17 118 aaPredicted RBP14.56□□□□□ -0.08
NFKB1-202ENST00000394820 PIGSQ96S52 555 aa14.56□□□□□ -0.08
NFKB1-202ENST00000394820 TMEM260Q9NX78 707 aa14.56□□□□□ -0.08
NFKB1-202ENST00000394820 ANAPC4Q9UJX5 808 aa14.56□□□□□ -0.08
NFKB1-202ENST00000394820 STK38LQ9Y2H1 464 aa14.56□□□□□ -0.08
NFKB1-202ENST00000394820 CD2APQ9Y5K6 639 aa14.56□□□□□ -0.08
NFKB1-202ENST00000394820 AKAP11Q9UKA4 1901 aa14.56□□□□□ -0.08
NFKB1-202ENST00000394820 MEIS1O00470 390 aa14.56□□□□□ -0.08
NFKB1-202ENST00000394820 SLC16A2P36021 539 aa14.56□□□□□ -0.08
NFKB1-202ENST00000394820 SLC1A4P43007 532 aa14.56□□□□□ -0.08
NFKB1-202ENST00000394820 PPP2R5BQ15173 497 aa14.56□□□□□ -0.08
NFKB1-202ENST00000394820 NONOQ15233 471 aaKnown RBP eCLIP14.56□□□□□ -0.08
NFKB1-202ENST00000394820 TCP11Q8WWU5 503 aa14.56□□□□□ -0.08
NFKB1-202ENST00000394820 RAB34Q9BZG1 259 aa14.56□□□□□ -0.08
NFKB1-202ENST00000394820 FAM184BQ9ULE4 1060 aa14.56□□□□□ -0.08
NFKB1-202ENST00000394820 RCCD1A6NED2 376 aa14.56□□□□□ -0.08
NFKB1-202ENST00000394820 LGALS16A8MUM7 142 aa14.56□□□□□ -0.08
NFKB1-202ENST00000394820 FGFR1OPO95684 399 aaKnown RBP14.56□□□□□ -0.08
NFKB1-202ENST00000394820 PEX19P40855 299 aa14.56□□□□□ -0.08
NFKB1-202ENST00000394820 FUT2Q10981 343 aa14.56□□□□□ -0.08
NFKB1-202ENST00000394820 TBX2Q13207 712 aaPredicted RBP14.56□□□□□ -0.08
NFKB1-202ENST00000394820 RPS6KA1Q15418 735 aa14.56□□□□□ -0.08
NFKB1-202ENST00000394820 CD209Q9NNX6 404 aa14.56□□□□□ -0.08
NFKB1-202ENST00000394820 NUP98P52948 1817 aa14.56□□□□□ -0.08
NFKB1-202ENST00000394820 GCOM1H8Y6P7 765 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms