RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 ADAM21Q9UKJ8 722 aa10.39□□□□□ -0.75
SNX1-202ENST00000380285 SYNGAP1Q96PV0 1343 aa10.39□□□□□ -0.75
SNX1-202ENST00000380285 TARSL2A2RTX5 802 aaKnown RBP10.39□□□□□ -0.75
SNX1-202ENST00000380285 ACTN1P12814 892 aa10.39□□□□□ -0.75
SNX1-202ENST00000380285 ZNF219Q9P2Y4 722 aaPredicted RBP10.39□□□□□ -0.75
SNX1-202ENST00000380285 BIN2Q9UBW5 565 aaPredicted RBP10.39□□□□□ -0.75
SNX1-202ENST00000380285 FOXP2O15409 715 aa10.39□□□□□ -0.75
SNX1-202ENST00000380285 PRDM1O75626 825 aa10.39□□□□□ -0.75
SNX1-202ENST00000380285 GSTA1P08263 222 aa10.39□□□□□ -0.75
SNX1-202ENST00000380285 GSTA2P09210 222 aa10.39□□□□□ -0.75
SNX1-202ENST00000380285 ADD1P35611 737 aaKnown RBP10.39□□□□□ -0.75
SNX1-202ENST00000380285 ZNF594Q96JF6 807 aaPredicted RBP10.39□□□□□ -0.75
SNX1-202ENST00000380285 CPSF1Q10570 1443 aaKnown RBP10.39□□□□□ -0.75
SNX1-202ENST00000380285 PLEKHG3A1L390 1219 aa10.39□□□□□ -0.75
SNX1-202ENST00000380285 GPC4O75487 556 aa10.39□□□□□ -0.75
SNX1-202ENST00000380285 KLHDC4Q8TBB5 520 aa10.39□□□□□ -0.75
SNX1-202ENST00000380285 TMEM60Q9H2L4 133 aa10.39□□□□□ -0.75
SNX1-202ENST00000380285 ATP8A1Q9Y2Q0 1164 aa10.39□□□□□ -0.75
SNX1-202ENST00000380285 IQANK1A0A1B0GTG1 560 aa10.39□□□□□ -0.75
SNX1-202ENST00000380285 KLRF2D3W0D1 207 aa10.39□□□□□ -0.75
SNX1-202ENST00000380285 APOA5Q6Q788 366 aa10.39□□□□□ -0.75
SNX1-202ENST00000380285 ZMAT2Q96NC0 199 aaKnown RBP10.39□□□□□ -0.75
SNX1-202ENST00000380285 PCDHA13Q9Y5I0 950 aa10.39□□□□□ -0.75
SNX1-202ENST00000380285 MCF2LO15068 1137 aa10.39□□□□□ -0.75
SNX1-202ENST00000380285 HNRNPCL1O60812 293 aaKnown RBP10.39□□□□□ -0.75
SNX1-202ENST00000380285 MYCNP04198 464 aaPredicted RBP10.39□□□□□ -0.75
SNX1-202ENST00000380285 CCNE1P24864 410 aa10.39□□□□□ -0.75
SNX1-202ENST00000380285 KIF23Q02241 960 aaPredicted RBP10.39□□□□□ -0.75
SNX1-202ENST00000380285 ORC2Q13416 577 aaPredicted RBP10.39□□□□□ -0.75
SNX1-202ENST00000380285 JADE1Q6IE81 842 aa10.39□□□□□ -0.75
SNX1-202ENST00000380285 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.39□□□□□ -0.75
SNX1-202ENST00000380285 SAAL1Q96ER3 474 aa10.39□□□□□ -0.75
SNX1-202ENST00000380285 STOML1Q9UBI4 398 aa10.39□□□□□ -0.75
SNX1-202ENST00000380285 HESX1Q9UBX0 185 aa10.39□□□□□ -0.75
SNX1-202ENST00000380285 PCCAP05165 728 aaPredicted RBP10.38□□□□□ -0.75
SNX1-202ENST00000380285 PHEXP78562 749 aa10.38□□□□□ -0.75
SNX1-202ENST00000380285 PROM2Q8N271 834 aa10.38□□□□□ -0.75
SNX1-202ENST00000380285 SCYL1Q96KG9 808 aa10.38□□□□□ -0.75
SNX1-202ENST00000380285 TTC25Q96NG3 672 aa10.38□□□□□ -0.75
SNX1-202ENST00000380285 SLC39A2Q9NP94 309 aa10.38□□□□□ -0.75
SNX1-202ENST00000380285 YEATS2Q9ULM3 1422 aa10.38□□□□□ -0.75
SNX1-202ENST00000380285 MIF4GDA9UHW6 222 aaKnown RBP10.38□□□□□ -0.75
SNX1-202ENST00000380285 MFAP3LO75121 409 aa10.38□□□□□ -0.75
SNX1-202ENST00000380285 IFNAR1P17181 557 aa10.38□□□□□ -0.75
SNX1-202ENST00000380285 INPP1P49441 399 aa10.38□□□□□ -0.75
SNX1-202ENST00000380285 HNRNPH2P55795 449 aaKnown RBP10.38□□□□□ -0.75
SNX1-202ENST00000380285 PLCB4Q15147 1175 aa10.38□□□□□ -0.75
SNX1-202ENST00000380285 MXD3Q9BW11 206 aa10.38□□□□□ -0.75
SNX1-202ENST00000380285 NR2F2P24468 414 aa10.38□□□□□ -0.75
SNX1-202ENST00000380285 DR1Q01658 176 aa10.38□□□□□ -0.75
SNX1-202ENST00000380285 ARMCX5Q6P1M9 558 aa10.38□□□□□ -0.75
SNX1-202ENST00000380285 TTC16Q8NEE8 873 aa10.38□□□□□ -0.75
SNX1-202ENST00000380285 RPSAP08865 295 aaKnown RBP10.38□□□□□ -0.75
SNX1-202ENST00000380285 POLR2MP0CAP2 368 aa10.38□□□□□ -0.75
SNX1-202ENST00000380285 LIFRP42702 1097 aa10.38□□□□□ -0.75
SNX1-202ENST00000380285 RCAN1P53805 252 aa10.38□□□□□ -0.75
SNX1-202ENST00000380285 PLA2G4DQ86XP0 818 aa10.38□□□□□ -0.75
SNX1-202ENST00000380285 CLIC6Q96NY7 704 aa10.38□□□□□ -0.75
SNX1-202ENST00000380285 PLEKHF1Q96S99 279 aa10.38□□□□□ -0.75
SNX1-202ENST00000380285 SH3GLB2Q9NR46 395 aa10.38□□□□□ -0.75
SNX1-202ENST00000380285 A6NJR5 290 aa10.38□□□□□ -0.75
SNX1-202ENST00000380285 YWHAGP61981 247 aaKnown RBP eCLIP10.38□□□□□ -0.75
SNX1-202ENST00000380285 RESTQ13127 1097 aa10.38□□□□□ -0.75
SNX1-202ENST00000380285 PCGF5Q86SE9 256 aa10.38□□□□□ -0.75
SNX1-202ENST00000380285 PDLIM2Q96JY6 352 aa10.38□□□□□ -0.75
SNX1-202ENST00000380285 ABCB6Q9NP58 842 aa10.38□□□□□ -0.75
SNX1-202ENST00000380285 MAPK4P31152 587 aa10.38□□□□□ -0.75
SNX1-202ENST00000380285 KRT19P08727 400 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 MYCLP12524 364 aaPredicted RBP10.37□□□□□ -0.75
SNX1-202ENST00000380285 ZNF827Q17R98 1081 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 TCP11X2Q5H9J9 407 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 CCDC87Q9NVE4 849 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 PKD2L1Q9P0L9 805 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 CDK12Q9NYV4 1490 aaPredicted RBP10.37□□□□□ -0.75
SNX1-202ENST00000380285 ZNF189O75820 626 aaPredicted RBP10.37□□□□□ -0.75
SNX1-202ENST00000380285 SPARCL1Q14515 664 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 HIBCHQ6NVY1 386 aaPredicted RBP10.37□□□□□ -0.75
SNX1-202ENST00000380285 PPM1KQ8N3J5 372 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 OLFM3Q96PB7 478 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 SGK1O00141 431 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 CFBP00751 764 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 SP4Q02446 784 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 GRAMD1AQ96CP6 724 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 SPDL1Q96EA4 605 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 UPF3AQ9H1J1 476 aaKnown RBP10.37□□□□□ -0.75
SNX1-202ENST00000380285 PDE1BQ01064 536 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 C2orf54Q08AI8 447 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 MKRN3Q13064 507 aaKnown RBP10.37□□□□□ -0.75
SNX1-202ENST00000380285 TEDDM1Q5T9Z0 273 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 CC2D1AQ6P1N0 951 aaPredicted RBP10.37□□□□□ -0.75
SNX1-202ENST00000380285 STK36Q9NRP7 1315 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 USP17L12C9JPN9 530 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 USP17L21D6R901 530 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 POC1B-GALNT4F8VUJ3 575 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 MED7O43513 233 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 PYGBP11216 843 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 RESP18Q5W5W9 173 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 RSBN1LQ6PCB5 846 aaPredicted RBP10.37□□□□□ -0.75
SNX1-202ENST00000380285 ENC1O14682 589 aa10.37□□□□□ -0.75
SNX1-202ENST00000380285 CPP00450 1065 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms