RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 PPP2R3BQ9Y5P8 575 aa13.55□□□□□ -0.24
HMGCL-202ENST00000374487 MRPL12P52815 198 aaKnown RBP13.54□□□□□ -0.24
HMGCL-202ENST00000374487 COPB1P53618 953 aaKnown RBP13.54□□□□□ -0.24
HMGCL-202ENST00000374487 SUPT20HL1Q3ZLR7 823 aa13.54□□□□□ -0.24
HMGCL-202ENST00000374487 CERKLQ49MI3 558 aaPredicted RBP13.54□□□□□ -0.24
HMGCL-202ENST00000374487 LDLRAD1Q5T700 205 aa13.54□□□□□ -0.24
HMGCL-202ENST00000374487 TOGARAM2Q6ZUX3 1019 aa13.54□□□□□ -0.24
HMGCL-202ENST00000374487 CNGA4Q8IV77 575 aa13.54□□□□□ -0.24
HMGCL-202ENST00000374487 GIMAP8Q8ND71 665 aaPredicted RBP13.54□□□□□ -0.24
HMGCL-202ENST00000374487 CUL5Q93034 780 aa13.54□□□□□ -0.24
HMGCL-202ENST00000374487 CDK5RAP3Q96JB5 506 aa13.54□□□□□ -0.24
HMGCL-202ENST00000374487 NAA15Q9BXJ9 866 aaKnown RBP13.54□□□□□ -0.24
HMGCL-202ENST00000374487 EXOC1Q9NV70 894 aa13.54□□□□□ -0.24
HMGCL-202ENST00000374487 TAB2Q9NYJ8 693 aa13.54□□□□□ -0.24
HMGCL-202ENST00000374487 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.54□□□□□ -0.24
HMGCL-202ENST00000374487 PHLPP2Q6ZVD8 1323 aa13.54□□□□□ -0.24
HMGCL-202ENST00000374487 ZBTB5O15062 677 aa13.54□□□□□ -0.24
HMGCL-202ENST00000374487 KLRC4O43908 158 aa13.54□□□□□ -0.24
HMGCL-202ENST00000374487 CASP14P31944 242 aa13.54□□□□□ -0.24
HMGCL-202ENST00000374487 ASIC1P78348 528 aa13.54□□□□□ -0.24
HMGCL-202ENST00000374487 PDE4DQ08499 809 aa13.54□□□□□ -0.24
HMGCL-202ENST00000374487 NAA30Q147X3 362 aaPredicted RBP13.54□□□□□ -0.24
HMGCL-202ENST00000374487 FKBP1CQ5VVH2 108 aa13.54□□□□□ -0.24
HMGCL-202ENST00000374487 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.54□□□□□ -0.24
HMGCL-202ENST00000374487 RASAL3Q86YV0 1011 aa13.54□□□□□ -0.24
HMGCL-202ENST00000374487 ERO1AQ96HE7 468 aa13.54□□□□□ -0.24
HMGCL-202ENST00000374487 TRIM47Q96LD4 638 aa13.54□□□□□ -0.24
HMGCL-202ENST00000374487 TRIM9Q9C026 710 aa13.54□□□□□ -0.24
HMGCL-202ENST00000374487 PSTPIP2Q9H939 334 aa13.54□□□□□ -0.24
HMGCL-202ENST00000374487 TSKSQ9UJT2 592 aa13.54□□□□□ -0.24
HMGCL-202ENST00000374487 ITIH6Q6UXX5 1313 aa13.53□□□□□ -0.24
HMGCL-202ENST00000374487 TRIM49BA6NDI0 452 aa13.53□□□□□ -0.24
HMGCL-202ENST00000374487 USP17L10C9JJH3 530 aa13.53□□□□□ -0.24
HMGCL-202ENST00000374487 PES1O00541 588 aaKnown RBP13.53□□□□□ -0.24
HMGCL-202ENST00000374487 MARCH6O60337 910 aa13.53□□□□□ -0.24
HMGCL-202ENST00000374487 MFAP3LO75121 409 aa13.53□□□□□ -0.24
HMGCL-202ENST00000374487 TDP2O95551 362 aa13.53□□□□□ -0.24
HMGCL-202ENST00000374487 INPP5BP32019 993 aa13.53□□□□□ -0.24
HMGCL-202ENST00000374487 GJA5P36382 358 aa13.53□□□□□ -0.24
HMGCL-202ENST00000374487 SLC1A4P43007 532 aa13.53□□□□□ -0.24
HMGCL-202ENST00000374487 ARMC9Q7Z3E5 817 aa13.53□□□□□ -0.24
HMGCL-202ENST00000374487 MTMR9Q96QG7 549 aa13.53□□□□□ -0.24
HMGCL-202ENST00000374487 CSRNP1Q96S65 589 aa13.53□□□□□ -0.24
HMGCL-202ENST00000374487 KANSL2Q9H9L4 492 aa13.53□□□□□ -0.24
HMGCL-202ENST00000374487 ELP3Q9H9T3 547 aa13.53□□□□□ -0.24
HMGCL-202ENST00000374487 MAGEC2Q9UBF1 373 aaPredicted RBP13.53□□□□□ -0.24
HMGCL-202ENST00000374487 PAPPA2Q9BXP8 1791 aa13.53□□□□□ -0.24
HMGCL-202ENST00000374487 SLC37A4O43826 429 aa13.52□□□□□ -0.24
HMGCL-202ENST00000374487 PPP1R12BO60237 982 aaPredicted RBP13.52□□□□□ -0.24
HMGCL-202ENST00000374487 PPP1R11O60927 126 aaPredicted RBP13.52□□□□□ -0.24
HMGCL-202ENST00000374487 CCDC175P0C221 793 aa13.52□□□□□ -0.24
HMGCL-202ENST00000374487 EEF2P13639 858 aaKnown RBP13.52□□□□□ -0.24
HMGCL-202ENST00000374487 FXR2P51116 673 aaKnown RBP eCLIP13.52□□□□□ -0.24
HMGCL-202ENST00000374487 UBXN1Q04323 297 aa13.52□□□□□ -0.24
HMGCL-202ENST00000374487 UBE2SQ16763 222 aa13.52□□□□□ -0.24
HMGCL-202ENST00000374487 TRIM65Q6PJ69 517 aa13.52□□□□□ -0.24
HMGCL-202ENST00000374487 SV2BQ7L1I2 683 aa13.52□□□□□ -0.24
HMGCL-202ENST00000374487 LRRC15Q8TF66 581 aa13.52□□□□□ -0.24
HMGCL-202ENST00000374487 DHTKD1Q96HY7 919 aaPredicted RBP13.52□□□□□ -0.24
HMGCL-202ENST00000374487 NUP88Q99567 741 aaPredicted RBP13.52□□□□□ -0.24
HMGCL-202ENST00000374487 C7orf25Q9BPX7 421 aa13.52□□□□□ -0.24
HMGCL-202ENST00000374487 MMTAG2Q9BU76 263 aaKnown RBP13.52□□□□□ -0.24
HMGCL-202ENST00000374487 SRRTQ9BXP5 876 aaKnown RBP13.52□□□□□ -0.24
HMGCL-202ENST00000374487 GTPBP4Q9BZE4 634 aaKnown RBP13.52□□□□□ -0.24
HMGCL-202ENST00000374487 L2HGDHQ9H9P8 463 aa13.52□□□□□ -0.24
HMGCL-202ENST00000374487 SOWAHDA6NJG2 315 aa13.52□□□□□ -0.25
HMGCL-202ENST00000374487 FKBP1BP68106 108 aa13.52□□□□□ -0.25
HMGCL-202ENST00000374487 RRP1BQ14684 758 aaKnown RBP13.52□□□□□ -0.25
HMGCL-202ENST00000374487 SHROOM1Q2M3G4 852 aaPredicted RBP13.52□□□□□ -0.25
HMGCL-202ENST00000374487 GLIPR1L2Q4G1C9 344 aa13.52□□□□□ -0.25
HMGCL-202ENST00000374487 CCDC51Q96ER9 411 aa13.52□□□□□ -0.25
HMGCL-202ENST00000374487 DESI2Q9BSY9 194 aa13.52□□□□□ -0.25
HMGCL-202ENST00000374487 DNAJC18Q9H819 358 aa13.52□□□□□ -0.25
HMGCL-202ENST00000374487 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.52□□□□□ -0.25
HMGCL-202ENST00000374487 V9GYY5 206 aaPredicted RBP13.52□□□□□ -0.25
HMGCL-202ENST00000374487 ATRNL1Q5VV63 1379 aa13.51□□□□□ -0.25
HMGCL-202ENST00000374487 ENTPD3O75355 529 aa13.51□□□□□ -0.25
HMGCL-202ENST00000374487 URI1O94763 535 aaPredicted RBP13.51□□□□□ -0.25
HMGCL-202ENST00000374487 GYPCP04921 128 aa13.51□□□□□ -0.25
HMGCL-202ENST00000374487 SLC10A3P09131 477 aa13.51□□□□□ -0.25
HMGCL-202ENST00000374487 EEF1GP26641 437 aaKnown RBP13.51□□□□□ -0.25
HMGCL-202ENST00000374487 PMS1P54277 932 aaKnown RBP13.51□□□□□ -0.25
HMGCL-202ENST00000374487 GNG11P61952 73 aa13.51□□□□□ -0.25
HMGCL-202ENST00000374487 VGLL4Q14135 290 aa13.51□□□□□ -0.25
HMGCL-202ENST00000374487 TRIM14Q14142 442 aa13.51□□□□□ -0.25
HMGCL-202ENST00000374487 PDIA5Q14554 519 aa13.51□□□□□ -0.25
HMGCL-202ENST00000374487 KRT79Q5XKE5 535 aa13.51□□□□□ -0.25
HMGCL-202ENST00000374487 SLFN13Q68D06 897 aa13.51□□□□□ -0.25
HMGCL-202ENST00000374487 PPP4R3AQ6IN85 833 aa13.51□□□□□ -0.25
HMGCL-202ENST00000374487 CNNM4Q6P4Q7 775 aa13.51□□□□□ -0.25
HMGCL-202ENST00000374487 CCDC84Q86UT8 332 aaPredicted RBP13.51□□□□□ -0.25
HMGCL-202ENST00000374487 WRNIP1Q96S55 665 aa13.51□□□□□ -0.25
HMGCL-202ENST00000374487 CCDC94Q9BW85 323 aaPredicted RBP13.51□□□□□ -0.25
HMGCL-202ENST00000374487 THAP9Q9H5L6 903 aa13.51□□□□□ -0.25
HMGCL-202ENST00000374487 CGNQ9P2M7 1197 aaKnown RBP13.51□□□□□ -0.25
HMGCL-202ENST00000374487 DDX25Q9UHL0 483 aaKnown RBP13.51□□□□□ -0.25
HMGCL-202ENST00000374487 BICDL2A1A5D9 508 aa13.51□□□□□ -0.25
HMGCL-202ENST00000374487 NPM3O75607 178 aaKnown RBP13.51□□□□□ -0.25
HMGCL-202ENST00000374487 HSPA1AP0DMV8 641 aaKnown RBP13.51□□□□□ -0.25
HMGCL-202ENST00000374487 HSPA1BP0DMV9 641 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms