RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 PSMC6P62333 389 aa26.16■■□□□ 1.78
COL9A2-201ENST00000372736 ITGA7Q13683 1181 aa26.16■■□□□ 1.78
COL9A2-201ENST00000372736 LY6KQ17RY6 165 aa26.16■■□□□ 1.78
COL9A2-201ENST00000372736 VSIG10LQ86VR7 867 aa26.16■■□□□ 1.78
COL9A2-201ENST00000372736 TMEM39AQ9NV64 488 aa26.16■■□□□ 1.78
COL9A2-201ENST00000372736 POLR3EQ9NVU0 708 aa26.16■■□□□ 1.78
COL9A2-201ENST00000372736 SZT2Q5T011 3432 aa26.16■■□□□ 1.78
COL9A2-201ENST00000372736 GOLGA8AA7E2F4 631 aa26.15■■□□□ 1.78
COL9A2-201ENST00000372736 GOLGA8BA8MQT2 603 aa26.15■■□□□ 1.78
COL9A2-201ENST00000372736 PIK3CDO00329 1044 aa26.15■■□□□ 1.78
COL9A2-201ENST00000372736 MEIS2O14770 477 aa26.15■■□□□ 1.78
COL9A2-201ENST00000372736 MYCLP12524 364 aaPredicted RBP26.15■■□□□ 1.78
COL9A2-201ENST00000372736 RPS6KB1P23443 525 aa26.15■■□□□ 1.78
COL9A2-201ENST00000372736 ARHGAP1Q07960 439 aa26.15■■□□□ 1.78
COL9A2-201ENST00000372736 Q6ZUG5 572 aa26.15■■□□□ 1.78
COL9A2-201ENST00000372736 FBXL16Q8N461 479 aa26.15■■□□□ 1.78
COL9A2-201ENST00000372736 USP26Q9BXU7 913 aa26.15■■□□□ 1.78
COL9A2-201ENST00000372736 FAM217BQ9NTX9 383 aaPredicted RBP26.15■■□□□ 1.78
COL9A2-201ENST00000372736 DDX41Q9UJV9 622 aaKnown RBP26.15■■□□□ 1.78
COL9A2-201ENST00000372736 SOX1O00570 391 aaPredicted RBP26.14■■□□□ 1.78
COL9A2-201ENST00000372736 GH1P01241 217 aa26.14■■□□□ 1.78
COL9A2-201ENST00000372736 MYL3P08590 195 aa26.14■■□□□ 1.78
COL9A2-201ENST00000372736 CASTP20810 708 aaKnown RBP26.14■■□□□ 1.78
COL9A2-201ENST00000372736 CCND2P30279 289 aa26.14■■□□□ 1.78
COL9A2-201ENST00000372736 FGD1P98174 961 aa26.14■■□□□ 1.78
COL9A2-201ENST00000372736 USP17L6PQ6QN14 398 aa26.14■■□□□ 1.78
COL9A2-201ENST00000372736 BRF1Q92994 677 aa26.14■■□□□ 1.78
COL9A2-201ENST00000372736 AGXT2Q9BYV1 514 aa26.14■■□□□ 1.78
COL9A2-201ENST00000372736 MRVI1Q9Y6F6 885 aa26.14■■□□□ 1.78
COL9A2-201ENST00000372736 NID2Q14112 1375 aa26.13■■□□□ 1.77
COL9A2-201ENST00000372736 CD4P01730 458 aa26.13■■□□□ 1.77
COL9A2-201ENST00000372736 RAG1P15918 1043 aa26.13■■□□□ 1.77
COL9A2-201ENST00000372736 PSMA5P28066 241 aa26.13■■□□□ 1.77
COL9A2-201ENST00000372736 CDC27P30260 824 aa26.13■■□□□ 1.77
COL9A2-201ENST00000372736 APOBRQ0VD83 1088 aa26.13■■□□□ 1.77
COL9A2-201ENST00000372736 BRDTQ58F21 947 aaPredicted RBP26.13■■□□□ 1.77
COL9A2-201ENST00000372736 GPKOWQ92917 476 aaPredicted RBP eCLIP26.13■■□□□ 1.77
COL9A2-201ENST00000372736 SEZ6LQ9BYH1 1024 aa26.13■■□□□ 1.77
COL9A2-201ENST00000372736 MYH7BA7E2Y1 1941 aa26.12■■□□□ 1.77
COL9A2-201ENST00000372736 HEATR3Q7Z4Q2 680 aa26.12■■□□□ 1.77
COL9A2-201ENST00000372736 SMARCC2Q8TAQ2 1214 aa26.12■■□□□ 1.77
COL9A2-201ENST00000372736 AFG1LQ8WV93 481 aa26.12■■□□□ 1.77
COL9A2-201ENST00000372736 CUL5Q93034 780 aa26.12■■□□□ 1.77
COL9A2-201ENST00000372736 MTG1Q9BT17 334 aaPredicted RBP26.12■■□□□ 1.77
COL9A2-201ENST00000372736 TLR3O15455 904 aaKnown RBP26.11■■□□□ 1.77
COL9A2-201ENST00000372736 MMP3P08254 477 aa26.11■■□□□ 1.77
COL9A2-201ENST00000372736 MRPS9P82933 396 aaKnown RBP26.11■■□□□ 1.77
COL9A2-201ENST00000372736 WWC2Q6AWC2 1192 aa26.11■■□□□ 1.77
COL9A2-201ENST00000372736 EMID1Q96A84 441 aaPredicted RBP26.11■■□□□ 1.77
COL9A2-201ENST00000372736 ZFP91Q96JP5 570 aaPredicted RBP26.11■■□□□ 1.77
COL9A2-201ENST00000372736 PSTPIP2Q9H939 334 aa26.11■■□□□ 1.77
COL9A2-201ENST00000372736 NAP1L2Q9ULW6 460 aaPredicted RBP26.11■■□□□ 1.77
COL9A2-201ENST00000372736 KPNA6O60684 536 aa26.1■■□□□ 1.77
COL9A2-201ENST00000372736 TIMP1P01033 207 aa26.1■■□□□ 1.77
COL9A2-201ENST00000372736 METAP2P50579 478 aaKnown RBP eCLIP26.1■■□□□ 1.77
COL9A2-201ENST00000372736 LRIT3Q3SXY7 679 aa26.1■■□□□ 1.77
COL9A2-201ENST00000372736 LAMA2P24043 3122 aaKnown RBP26.09■■□□□ 1.77
COL9A2-201ENST00000372736 B4GALT4O60513 344 aa26.09■■□□□ 1.77
COL9A2-201ENST00000372736 TYW1BQ6NUM6 668 aa26.09■■□□□ 1.77
COL9A2-201ENST00000372736 KCNV1Q6PIU1 500 aa26.09■■□□□ 1.77
COL9A2-201ENST00000372736 LRCH3Q96II8 777 aa26.09■■□□□ 1.77
COL9A2-201ENST00000372736 TRPV6Q9H1D0 765 aa26.09■■□□□ 1.77
COL9A2-201ENST00000372736 ALDH8A1Q9H2A2 487 aaPredicted RBP26.09■■□□□ 1.77
COL9A2-201ENST00000372736 ZSWIM6Q9HCJ5 1215 aa26.09■■□□□ 1.77
COL9A2-201ENST00000372736 STAM2O75886 525 aa26.08■■□□□ 1.77
COL9A2-201ENST00000372736 UBA1P22314 1058 aaKnown RBP26.08■■□□□ 1.77
COL9A2-201ENST00000372736 ADD1P35611 737 aaKnown RBP26.08■■□□□ 1.77
COL9A2-201ENST00000372736 UBE2SQ16763 222 aa26.08■■□□□ 1.77
COL9A2-201ENST00000372736 RUFY3Q7L099 469 aa26.08■■□□□ 1.77
COL9A2-201ENST00000372736 INPP4AQ96PE3 977 aaPredicted RBP26.08■■□□□ 1.77
COL9A2-201ENST00000372736 V9GY48 417 aaPredicted RBP26.08■■□□□ 1.77
COL9A2-201ENST00000372736 EPHB4P54760 987 aa26.07■■□□□ 1.76
COL9A2-201ENST00000372736 SP2Q02086 613 aa26.07■■□□□ 1.76
COL9A2-201ENST00000372736 FPGSQ05932 587 aa26.07■■□□□ 1.76
COL9A2-201ENST00000372736 LAMC2Q13753 1193 aa26.07■■□□□ 1.76
COL9A2-201ENST00000372736 NBPF20Q3BBV1 942 aa26.07■■□□□ 1.76
COL9A2-201ENST00000372736 C9orf50Q5SZB4 431 aa26.07■■□□□ 1.76
COL9A2-201ENST00000372736 PCNX4Q63HM2 1172 aa26.07■■□□□ 1.76
COL9A2-201ENST00000372736 PPP1R18Q6NYC8 613 aa26.07■■□□□ 1.76
COL9A2-201ENST00000372736 PPTC7Q8NI37 304 aa26.07■■□□□ 1.76
COL9A2-201ENST00000372736 DOCK5Q9H7D0 1870 aa26.06■■□□□ 1.76
COL9A2-201ENST00000372736 CCDC196A0A1B0GTZ2 297 aa26.06■■□□□ 1.76
COL9A2-201ENST00000372736 hCG_1984214I3L0E3 225 aa26.06■■□□□ 1.76
COL9A2-201ENST00000372736 STXBP3O00186 592 aa26.06■■□□□ 1.76
COL9A2-201ENST00000372736 TGFB3P10600 412 aa26.06■■□□□ 1.76
COL9A2-201ENST00000372736 EVCP57679 992 aa26.06■■□□□ 1.76
COL9A2-201ENST00000372736 TOB2Q14106 344 aaPredicted RBP26.06■■□□□ 1.76
COL9A2-201ENST00000372736 SHHQ15465 462 aa26.06■■□□□ 1.76
COL9A2-201ENST00000372736 CELF3Q5SZQ8 465 aaKnown RBP26.06■■□□□ 1.76
COL9A2-201ENST00000372736 MYSM1Q5VVJ2 828 aa26.06■■□□□ 1.76
COL9A2-201ENST00000372736 MFSD5Q6N075 450 aa26.06■■□□□ 1.76
COL9A2-201ENST00000372736 DHX37Q8IY37 1157 aaKnown RBP26.06■■□□□ 1.76
COL9A2-201ENST00000372736 ZNF713Q8N859 430 aaPredicted RBP26.06■■□□□ 1.76
COL9A2-201ENST00000372736 TM6SF1Q9BZW5 370 aa26.06■■□□□ 1.76
COL9A2-201ENST00000372736 GGPS1O95749 300 aa26.05■■□□□ 1.76
COL9A2-201ENST00000372736 HOXD8P13378 290 aaPredicted RBP26.05■■□□□ 1.76
COL9A2-201ENST00000372736 ICAM3P32942 547 aa26.05■■□□□ 1.76
COL9A2-201ENST00000372736 NAPAP54920 295 aa26.05■■□□□ 1.76
COL9A2-201ENST00000372736 SEMA3FQ13275 785 aa26.05■■□□□ 1.76
COL9A2-201ENST00000372736 DGKDQ16760 1214 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms