RNA–Protein interactions for RNA: ENST00000365287.1

RNU4-11P-201, Transcript of RNA, U4 small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4-11P, Length 132 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-11P-201ENST00000365287 NKX3-2P78367 333 aa2.93□□□□□ -1.94
RNU4-11P-201ENST00000365287 CLCQ05315 142 aa2.93□□□□□ -1.94
RNU4-11P-201ENST00000365287 TDRD10Q5VZ19 366 aaKnown RBP2.93□□□□□ -1.94
RNU4-11P-201ENST00000365287 DCAF15Q66K64 600 aa2.93□□□□□ -1.94
RNU4-11P-201ENST00000365287 TCTN3Q6NUS6 607 aa2.93□□□□□ -1.94
RNU4-11P-201ENST00000365287 FBXL19Q6PCT2 694 aa2.93□□□□□ -1.94
RNU4-11P-201ENST00000365287 PCSK4Q6UW60 755 aa2.93□□□□□ -1.94
RNU4-11P-201ENST00000365287 MRGPRGQ86SM5 289 aa2.93□□□□□ -1.94
RNU4-11P-201ENST00000365287 AGAP2Q99490 1192 aa2.93□□□□□ -1.94
RNU4-11P-201ENST00000365287 NOL6Q9H6R4 1146 aaKnown RBP2.93□□□□□ -1.94
RNU4-11P-201ENST00000365287 PARP2Q9UGN5 583 aa2.93□□□□□ -1.94
RNU4-11P-201ENST00000365287 ADAM29Q9UKF5 820 aa2.93□□□□□ -1.94
RNU4-11P-201ENST00000365287 SGSM2O43147 1006 aa2.92□□□□□ -1.94
RNU4-11P-201ENST00000365287 FUCA1P04066 466 aa2.92□□□□□ -1.94
RNU4-11P-201ENST00000365287 PAMP19021 973 aa2.92□□□□□ -1.94
RNU4-11P-201ENST00000365287 COMTP21964 271 aa2.92□□□□□ -1.94
RNU4-11P-201ENST00000365287 IL12RB1P42701 662 aa2.92□□□□□ -1.94
RNU4-11P-201ENST00000365287 CRKP46108 304 aa2.92□□□□□ -1.94
RNU4-11P-201ENST00000365287 SEPHS1P49903 392 aa2.92□□□□□ -1.94
RNU4-11P-201ENST00000365287 ZNF165P49910 485 aa2.92□□□□□ -1.94
RNU4-11P-201ENST00000365287 MLLT6P55198 1093 aaPredicted RBP2.92□□□□□ -1.94
RNU4-11P-201ENST00000365287 KRTAP10-9P60411 292 aa2.92□□□□□ -1.94
RNU4-11P-201ENST00000365287 CR1LQ2VPA4 569 aa2.92□□□□□ -1.94
RNU4-11P-201ENST00000365287 AXDND1Q5T1B0 1012 aaPredicted RBP2.92□□□□□ -1.94
RNU4-11P-201ENST00000365287 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
RNU4-11P-201ENST00000365287 GK5Q6ZS86 529 aa2.92□□□□□ -1.94
RNU4-11P-201ENST00000365287 RALYLQ86SE5 291 aaKnown RBP2.92□□□□□ -1.94
RNU4-11P-201ENST00000365287 PPFIBP1Q86W92 1011 aa2.92□□□□□ -1.94
RNU4-11P-201ENST00000365287 TAB3Q8N5C8 712 aaPredicted RBP2.92□□□□□ -1.94
RNU4-11P-201ENST00000365287 PLEKHO2Q8TD55 490 aa2.92□□□□□ -1.94
RNU4-11P-201ENST00000365287 CACTINQ8WUQ7 758 aaKnown RBP2.92□□□□□ -1.94
RNU4-11P-201ENST00000365287 ZCCHC14Q8WYQ9 949 aaKnown RBP2.92□□□□□ -1.94
RNU4-11P-201ENST00000365287 EXTL1Q92935 676 aa2.92□□□□□ -1.94
RNU4-11P-201ENST00000365287 LMF1Q96S06 567 aa2.92□□□□□ -1.94
RNU4-11P-201ENST00000365287 PRRX2Q99811 253 aa2.92□□□□□ -1.94
RNU4-11P-201ENST00000365287 YIPF4Q9BSR8 244 aa2.92□□□□□ -1.94
RNU4-11P-201ENST00000365287 KBTBD4Q9NVX7 518 aa2.92□□□□□ -1.94
RNU4-11P-201ENST00000365287 DIS3Q9Y2L1 958 aaKnown RBP2.92□□□□□ -1.94
RNU4-11P-201ENST00000365287 DMRT1Q9Y5R6 373 aa2.92□□□□□ -1.94
RNU4-11P-201ENST00000365287 BACE2Q9Y5Z0 518 aa2.92□□□□□ -1.94
RNU4-11P-201ENST00000365287 SLC4A7Q9Y6M7 1214 aa2.92□□□□□ -1.94
RNU4-11P-201ENST00000365287 NPHP3-ACAD11A0A0J9YXS1 232 aa2.91□□□□□ -1.94
RNU4-11P-201ENST00000365287 C7orf72A4D263 438 aa2.91□□□□□ -1.94
RNU4-11P-201ENST00000365287 STXBP3O00186 592 aa2.91□□□□□ -1.94
RNU4-11P-201ENST00000365287 U2SURPO15042 1029 aaKnown RBP2.91□□□□□ -1.94
RNU4-11P-201ENST00000365287 EIF4A3P38919 411 aaKnown RBP2.91□□□□□ -1.94
RNU4-11P-201ENST00000365287 STAT5AP42229 794 aa2.91□□□□□ -1.94
RNU4-11P-201ENST00000365287 KRTAP10-11P60412 298 aa2.91□□□□□ -1.94
RNU4-11P-201ENST00000365287 ZC3H6P61129 1189 aaKnown RBP2.91□□□□□ -1.94
RNU4-11P-201ENST00000365287 DGCR2P98153 550 aa2.91□□□□□ -1.94
RNU4-11P-201ENST00000365287 CCDC142Q17RM4 750 aa2.91□□□□□ -1.94
RNU4-11P-201ENST00000365287 EAPPQ56P03 285 aaPredicted RBP2.91□□□□□ -1.94
RNU4-11P-201ENST00000365287 TMC4Q7Z404 712 aa2.91□□□□□ -1.94
RNU4-11P-201ENST00000365287 RNF34Q969K3 372 aa2.91□□□□□ -1.94
RNU4-11P-201ENST00000365287 ZSWIM3Q96MP5 696 aa2.91□□□□□ -1.94
RNU4-11P-201ENST00000365287 GNRHR2Q96P88 292 aa2.91□□□□□ -1.94
RNU4-11P-201ENST00000365287 TMEM209Q96SK2 561 aa2.91□□□□□ -1.94
RNU4-11P-201ENST00000365287 MCMBPQ9BTE3 642 aa2.91□□□□□ -1.94
RNU4-11P-201ENST00000365287 ZNF451Q9Y4E5 1061 aa2.91□□□□□ -1.94
RNU4-11P-201ENST00000365287 C2orf71A6NGG8 1288 aa2.9□□□□□ -1.95
RNU4-11P-201ENST00000365287 MAKP20794 623 aa2.9□□□□□ -1.95
RNU4-11P-201ENST00000365287 TCEAL1Q15170 157 aa2.9□□□□□ -1.95
RNU4-11P-201ENST00000365287 SEZ6Q53EL9 994 aa2.9□□□□□ -1.95
RNU4-11P-201ENST00000365287 AGBL4Q5VU57 503 aa2.9□□□□□ -1.95
RNU4-11P-201ENST00000365287 TRMT10BQ6PF06 316 aaKnown RBP2.9□□□□□ -1.95
RNU4-11P-201ENST00000365287 ERMP1Q7Z2K6 904 aa2.9□□□□□ -1.95
RNU4-11P-201ENST00000365287 MILR1Q7Z6M3 343 aa2.9□□□□□ -1.95
RNU4-11P-201ENST00000365287 CPNE8Q86YQ8 564 aa2.9□□□□□ -1.95
RNU4-11P-201ENST00000365287 C1orf210Q8IVY1 113 aa2.9□□□□□ -1.95
RNU4-11P-201ENST00000365287 SLITRK4Q8IW52 837 aa2.9□□□□□ -1.95
RNU4-11P-201ENST00000365287 IFNL2Q8IZJ0 200 aa2.9□□□□□ -1.95
RNU4-11P-201ENST00000365287 GIMAP8Q8ND71 665 aaPredicted RBP2.9□□□□□ -1.95
RNU4-11P-201ENST00000365287 ZNF483Q8TF39 744 aaPredicted RBP2.9□□□□□ -1.95
RNU4-11P-201ENST00000365287 LARP4BQ92615 738 aaKnown RBP2.9□□□□□ -1.95
RNU4-11P-201ENST00000365287 WHRNQ9P202 907 aa2.9□□□□□ -1.95
RNU4-11P-201ENST00000365287 CROTQ9UKG9 612 aa2.9□□□□□ -1.95
RNU4-11P-201ENST00000365287 ZDHHC9Q9Y397 364 aa2.9□□□□□ -1.95
RNU4-11P-201ENST00000365287 FAM86C2PA6NEL3 165 aa2.89□□□□□ -1.95
RNU4-11P-201ENST00000365287 RAMP2O60895 175 aa2.89□□□□□ -1.95
RNU4-11P-201ENST00000365287 RAD17O75943 681 aa2.89□□□□□ -1.95
RNU4-11P-201ENST00000365287 THBDP07204 575 aa2.89□□□□□ -1.95
RNU4-11P-201ENST00000365287 C1SP09871 688 aa2.89□□□□□ -1.95
RNU4-11P-201ENST00000365287 ACRV1P26436 265 aa2.89□□□□□ -1.95
RNU4-11P-201ENST00000365287 MCM4P33991 863 aa2.89□□□□□ -1.95
RNU4-11P-201ENST00000365287 APOBRQ0VD83 1088 aa2.89□□□□□ -1.95
RNU4-11P-201ENST00000365287 TUBA3CQ13748 450 aa2.89□□□□□ -1.95
RNU4-11P-201ENST00000365287 TUBA3EQ6PEY2 450 aa2.89□□□□□ -1.95
RNU4-11P-201ENST00000365287 RIOX2Q8IUF8 465 aa2.89□□□□□ -1.95
RNU4-11P-201ENST00000365287 FAM89AQ96GI7 184 aa2.89□□□□□ -1.95
RNU4-11P-201ENST00000365287 TOE1Q96GM8 510 aaKnown RBP2.89□□□□□ -1.95
RNU4-11P-201ENST00000365287 PLEKHG4BQ96PX9 1271 aa2.89□□□□□ -1.95
RNU4-11P-201ENST00000365287 LRRC37BQ96QE4 947 aa2.89□□□□□ -1.95
RNU4-11P-201ENST00000365287 DTLQ9NZJ0 730 aa2.89□□□□□ -1.95
RNU4-11P-201ENST00000365287 MARCH2Q9P0N8 246 aa2.89□□□□□ -1.95
RNU4-11P-201ENST00000365287 PLSCR1O15162 318 aa2.88□□□□□ -1.95
RNU4-11P-201ENST00000365287 CBFA2T2O43439 604 aa2.88□□□□□ -1.95
RNU4-11P-201ENST00000365287 TP53P04637 393 aaPredicted RBP2.88□□□□□ -1.95
RNU4-11P-201ENST00000365287 CHGBP05060 677 aa2.88□□□□□ -1.95
RNU4-11P-201ENST00000365287 IMPDH2P12268 514 aa2.88□□□□□ -1.95
RNU4-11P-201ENST00000365287 ACO1P21399 889 aaKnown RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms