RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 LMNB1P20700 586 aa17.48■□□□□ 0.39
PTPN11-201ENST00000351677 NSFP46459 744 aaKnown RBP17.48■□□□□ 0.39
PTPN11-201ENST00000351677 P3H4Q92791 437 aa17.48■□□□□ 0.39
PTPN11-201ENST00000351677 TMEM191BP0C7N4 346 aa17.48■□□□□ 0.39
PTPN11-201ENST00000351677 HADHQ16836 314 aaKnown RBP17.48■□□□□ 0.39
PTPN11-201ENST00000351677 CACNA2D3Q8IZS8 1091 aa17.48■□□□□ 0.39
PTPN11-201ENST00000351677 EIF4A3P38919 411 aaKnown RBP17.48■□□□□ 0.39
PTPN11-201ENST00000351677 IGBP1P78318 339 aa17.48■□□□□ 0.39
PTPN11-201ENST00000351677 STAG1Q8WVM7 1258 aa17.48■□□□□ 0.39
PTPN11-201ENST00000351677 NCAPD2Q15021 1401 aa17.48■□□□□ 0.39
PTPN11-201ENST00000351677 BMP3P12645 472 aa17.48■□□□□ 0.39
PTPN11-201ENST00000351677 CCNE1P24864 410 aa17.48■□□□□ 0.39
PTPN11-201ENST00000351677 CYP27A1Q02318 531 aa17.48■□□□□ 0.39
PTPN11-201ENST00000351677 CCDC125Q86Z20 511 aa17.48■□□□□ 0.39
PTPN11-201ENST00000351677 PLCD3Q8N3E9 789 aa17.48■□□□□ 0.39
PTPN11-201ENST00000351677 EPB41L5Q9HCM4 733 aa17.48■□□□□ 0.39
PTPN11-201ENST00000351677 CAPN7Q9Y6W3 813 aa17.48■□□□□ 0.39
PTPN11-201ENST00000351677 ATF2P15336 505 aa17.48■□□□□ 0.39
PTPN11-201ENST00000351677 ANKRD20A3Q5VUR7 823 aa17.48■□□□□ 0.39
PTPN11-201ENST00000351677 RILPQ96NA2 401 aa17.48■□□□□ 0.39
PTPN11-201ENST00000351677 THAP9Q9H5L6 903 aa17.48■□□□□ 0.39
PTPN11-201ENST00000351677 HOMER3Q9NSC5 361 aa17.48■□□□□ 0.39
PTPN11-201ENST00000351677 SPHKAPQ2M3C7 1700 aa17.47■□□□□ 0.39
PTPN11-201ENST00000351677 H0YCG3 227 aa17.47■□□□□ 0.39
PTPN11-201ENST00000351677 M0QZ92 97 aa17.47■□□□□ 0.39
PTPN11-201ENST00000351677 LLGL1Q15334 1064 aa17.47■□□□□ 0.39
PTPN11-201ENST00000351677 TCP11X2Q5H9J9 407 aa17.47■□□□□ 0.39
PTPN11-201ENST00000351677 SH3RF3Q8TEJ3 882 aaPredicted RBP17.47■□□□□ 0.39
PTPN11-201ENST00000351677 PPP1R12CQ9BZL4 782 aa17.47■□□□□ 0.39
PTPN11-201ENST00000351677 MFAP3P55082 362 aa17.47■□□□□ 0.39
PTPN11-201ENST00000351677 KRT31Q15323 416 aa17.47■□□□□ 0.39
PTPN11-201ENST00000351677 ZNF148Q9UQR1 794 aa17.47■□□□□ 0.39
PTPN11-201ENST00000351677 LRRC7Q96NW7 1537 aa17.47■□□□□ 0.39
PTPN11-201ENST00000351677 GFPT2O94808 682 aa17.47■□□□□ 0.39
PTPN11-201ENST00000351677 EMILIN3Q9NT22 766 aa17.47■□□□□ 0.39
PTPN11-201ENST00000351677 GDAQ9Y2T3 454 aa17.47■□□□□ 0.39
PTPN11-201ENST00000351677 A2ML1A8K2U0 1454 aa17.47■□□□□ 0.39
PTPN11-201ENST00000351677 LAMC1P11047 1609 aa17.47■□□□□ 0.39
PTPN11-201ENST00000351677 PLA2G4BP0C869 781 aa17.47■□□□□ 0.39
PTPN11-201ENST00000351677 GAP43P17677 238 aa17.47■□□□□ 0.39
PTPN11-201ENST00000351677 CUL4BQ13620 913 aa17.47■□□□□ 0.39
PTPN11-201ENST00000351677 NT5C1BQ96P26 610 aa17.47■□□□□ 0.39
PTPN11-201ENST00000351677 QTRT2Q9H974 415 aaKnown RBP17.47■□□□□ 0.39
PTPN11-201ENST00000351677 NDUFA10O95299 355 aa17.46■□□□□ 0.39
PTPN11-201ENST00000351677 MYL1P05976 194 aa17.46■□□□□ 0.39
PTPN11-201ENST00000351677 MAGOHBQ96A72 148 aaKnown RBP17.46■□□□□ 0.39
PTPN11-201ENST00000351677 DISC1Q9NRI5 854 aa17.46■□□□□ 0.39
PTPN11-201ENST00000351677 PALLDQ8WX93 1383 aa17.46■□□□□ 0.39
PTPN11-201ENST00000351677 HEXIM1O94992 359 aaKnown RBP17.46■□□□□ 0.39
PTPN11-201ENST00000351677 PTK2Q05397 1052 aa17.46■□□□□ 0.39
PTPN11-201ENST00000351677 MED10Q9BTT4 135 aa17.46■□□□□ 0.39
PTPN11-201ENST00000351677 ALKQ9UM73 1620 aa17.46■□□□□ 0.39
PTPN11-201ENST00000351677 GRAPQ13588 217 aa17.46■□□□□ 0.39
PTPN11-201ENST00000351677 SYDE2Q5VT97 1194 aa17.46■□□□□ 0.39
PTPN11-201ENST00000351677 GRAPLQ8TC17 118 aaPredicted RBP17.46■□□□□ 0.39
PTPN11-201ENST00000351677 DDX23Q9BUQ8 820 aaKnown RBP17.46■□□□□ 0.39
PTPN11-201ENST00000351677 NACA2Q9H009 215 aa17.46■□□□□ 0.39
PTPN11-201ENST00000351677 TMTC3Q6ZXV5 915 aa17.46■□□□□ 0.39
PTPN11-201ENST00000351677 GCNT4Q9P109 453 aa17.46■□□□□ 0.39
PTPN11-201ENST00000351677 ZDHHC9Q9Y397 364 aa17.46■□□□□ 0.39
PTPN11-201ENST00000351677 PCDHB4Q9Y5E5 795 aa17.46■□□□□ 0.39
PTPN11-201ENST00000351677 GMNNO75496 209 aa17.46■□□□□ 0.39
PTPN11-201ENST00000351677 HOXA13P31271 388 aaPredicted RBP17.46■□□□□ 0.39
PTPN11-201ENST00000351677 AOC3Q16853 763 aa17.46■□□□□ 0.39
PTPN11-201ENST00000351677 OXER1Q8TDS5 423 aa17.46■□□□□ 0.39
PTPN11-201ENST00000351677 PARD6BQ9BYG5 372 aa17.46■□□□□ 0.39
PTPN11-201ENST00000351677 QRICH2Q9H0J4 1663 aa17.46■□□□□ 0.38
PTPN11-201ENST00000351677 hCG_1984214I3L0E3 225 aa17.45■□□□□ 0.38
PTPN11-201ENST00000351677 NMT2O60551 498 aa17.45■□□□□ 0.38
PTPN11-201ENST00000351677 TMOD1P28289 359 aa17.45■□□□□ 0.38
PTPN11-201ENST00000351677 BAG6P46379 1132 aa17.45■□□□□ 0.38
PTPN11-201ENST00000351677 ZBED6P86452 979 aa17.45■□□□□ 0.38
PTPN11-201ENST00000351677 GABPAQ06546 454 aa17.45■□□□□ 0.38
PTPN11-201ENST00000351677 BFSP1Q12934 665 aa17.45■□□□□ 0.38
PTPN11-201ENST00000351677 ZNF713Q8N859 430 aaPredicted RBP17.45■□□□□ 0.38
PTPN11-201ENST00000351677 RNF169Q8NCN4 708 aa17.45■□□□□ 0.38
PTPN11-201ENST00000351677 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.45■□□□□ 0.38
PTPN11-201ENST00000351677 PASKQ96RG2 1323 aa17.45■□□□□ 0.38
PTPN11-201ENST00000351677 PRDX5P30044 214 aa17.45■□□□□ 0.38
PTPN11-201ENST00000351677 STAT2P52630 851 aa17.45■□□□□ 0.38
PTPN11-201ENST00000351677 PANX2Q96RD6 677 aa17.45■□□□□ 0.38
PTPN11-201ENST00000351677 ANO3Q9BYT9 981 aa17.45■□□□□ 0.38
PTPN11-201ENST00000351677 CPVLQ9H3G5 476 aa17.45■□□□□ 0.38
PTPN11-201ENST00000351677 CDC42BPBQ9Y5S2 1711 aa17.45■□□□□ 0.38
PTPN11-201ENST00000351677 RNF17Q9BXT8 1623 aaKnown RBP17.45■□□□□ 0.38
PTPN11-201ENST00000351677 PHBP35232 272 aa17.45■□□□□ 0.38
PTPN11-201ENST00000351677 PSMD6Q15008 389 aa17.45■□□□□ 0.38
PTPN11-201ENST00000351677 CDC37Q16543 378 aaPredicted RBP17.45■□□□□ 0.38
PTPN11-201ENST00000351677 BRIP1Q9BX63 1249 aa17.45■□□□□ 0.38
PTPN11-201ENST00000351677 CC2D2BQ6DHV5 1058 aa17.45■□□□□ 0.38
PTPN11-201ENST00000351677 SESTD1Q86VW0 696 aa17.45■□□□□ 0.38
PTPN11-201ENST00000351677 NRBP2Q9NSY0 501 aa17.45■□□□□ 0.38
PTPN11-201ENST00000351677 ZNF653Q96CK0 615 aa17.45■□□□□ 0.38
PTPN11-201ENST00000351677 RIOK1Q9BRS2 568 aaKnown RBP17.45■□□□□ 0.38
PTPN11-201ENST00000351677 MYO1FO00160 1098 aa17.44■□□□□ 0.38
PTPN11-201ENST00000351677 CLNS1AP54105 237 aaKnown RBP17.44■□□□□ 0.38
PTPN11-201ENST00000351677 ACCSQ96QU6 501 aa17.44■□□□□ 0.38
PTPN11-201ENST00000351677 NDST4Q9H3R1 872 aa17.44■□□□□ 0.38
PTPN11-201ENST00000351677 PCDHA13Q9Y5I0 950 aa17.44■□□□□ 0.38
PTPN11-201ENST00000351677 TROVE2P10155 538 aaKnown RBP eCLIP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms