RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 SAPCD2Q86UD0 394 aa16.65■□□□□ 0.26
CDK5RAP3-201ENST00000338399 IL31RAQ8NI17 732 aa16.65■□□□□ 0.26
CDK5RAP3-201ENST00000338399 ETNPPLQ8TBG4 499 aa16.65■□□□□ 0.26
CDK5RAP3-201ENST00000338399 RMDN3Q96TC7 470 aa16.65■□□□□ 0.26
CDK5RAP3-201ENST00000338399 MOV10L1Q9BXT6 1211 aaKnown RBP16.65■□□□□ 0.26
CDK5RAP3-201ENST00000338399 PCDHA12Q9UN75 941 aa16.65■□□□□ 0.26
CDK5RAP3-201ENST00000338399 SLC45A1Q9Y2W3 748 aa16.65■□□□□ 0.26
CDK5RAP3-201ENST00000338399 MSH4O15457 936 aa16.65■□□□□ 0.26
CDK5RAP3-201ENST00000338399 ACTN4O43707 911 aaKnown RBP16.65■□□□□ 0.26
CDK5RAP3-201ENST00000338399 KARSQ15046 597 aaKnown RBP16.65■□□□□ 0.26
CDK5RAP3-201ENST00000338399 CEP55Q53EZ4 464 aa16.65■□□□□ 0.26
CDK5RAP3-201ENST00000338399 ANKRD23Q86SG2 305 aa16.65■□□□□ 0.26
CDK5RAP3-201ENST00000338399 PLA2G4DQ86XP0 818 aa16.65■□□□□ 0.26
CDK5RAP3-201ENST00000338399 RASAL3Q86YV0 1011 aa16.65■□□□□ 0.26
CDK5RAP3-201ENST00000338399 SLFN12Q8IYM2 578 aa16.65■□□□□ 0.26
CDK5RAP3-201ENST00000338399 SMC1BQ8NDV3 1235 aa16.65■□□□□ 0.26
CDK5RAP3-201ENST00000338399 FUCA2Q9BTY2 467 aa16.65■□□□□ 0.26
CDK5RAP3-201ENST00000338399 RAB34Q9BZG1 259 aa16.65■□□□□ 0.26
CDK5RAP3-201ENST00000338399 CCSER1Q9C0I3 900 aa16.65■□□□□ 0.26
CDK5RAP3-201ENST00000338399 TSPY26PQ9H489 355 aa16.65■□□□□ 0.26
CDK5RAP3-201ENST00000338399 PXMP2Q9NR77 195 aa16.65■□□□□ 0.26
CDK5RAP3-201ENST00000338399 LRWD1Q9UFC0 647 aa16.65■□□□□ 0.26
CDK5RAP3-201ENST00000338399 FBXO40Q9UH90 709 aa16.65■□□□□ 0.26
CDK5RAP3-201ENST00000338399 LCTP09848 1927 aa16.64■□□□□ 0.25
CDK5RAP3-201ENST00000338399 FRMPD4Q14CM0 1322 aa16.64■□□□□ 0.25
CDK5RAP3-201ENST00000338399 GOLGA6L3A6NEY3 463 aa16.64■□□□□ 0.25
CDK5RAP3-201ENST00000338399 POTEMA6NI47 508 aa16.64■□□□□ 0.25
CDK5RAP3-201ENST00000338399 TBX3O15119 743 aa16.64■□□□□ 0.25
CDK5RAP3-201ENST00000338399 PDIA5Q14554 519 aa16.64■□□□□ 0.25
CDK5RAP3-201ENST00000338399 PGM5Q15124 567 aa16.64■□□□□ 0.25
CDK5RAP3-201ENST00000338399 ARHGEF16Q5VV41 709 aa16.64■□□□□ 0.25
CDK5RAP3-201ENST00000338399 CABP7Q86V35 215 aa16.64■□□□□ 0.25
CDK5RAP3-201ENST00000338399 ANKRD35Q8N283 1001 aa16.64■□□□□ 0.25
CDK5RAP3-201ENST00000338399 FAM43AQ8N2R8 423 aa16.64■□□□□ 0.25
CDK5RAP3-201ENST00000338399 RASSF8Q8NHQ8 419 aa16.64■□□□□ 0.25
CDK5RAP3-201ENST00000338399 SMCR8Q8TEV9 937 aaPredicted RBP16.64■□□□□ 0.25
CDK5RAP3-201ENST00000338399 FOXN1O15353 648 aa16.63■□□□□ 0.25
CDK5RAP3-201ENST00000338399 ERCC3P19447 782 aa16.63■□□□□ 0.25
CDK5RAP3-201ENST00000338399 ZRSR1Q15695 479 aaKnown RBP16.63■□□□□ 0.25
CDK5RAP3-201ENST00000338399 PCNX4Q63HM2 1172 aa16.63■□□□□ 0.25
CDK5RAP3-201ENST00000338399 RGMBQ6NW40 437 aa16.63■□□□□ 0.25
CDK5RAP3-201ENST00000338399 FAM20AQ96MK3 541 aa16.63■□□□□ 0.25
CDK5RAP3-201ENST00000338399 PTPN18Q99952 460 aa16.63■□□□□ 0.25
CDK5RAP3-201ENST00000338399 MXRA8Q9BRK3 442 aa16.63■□□□□ 0.25
CDK5RAP3-201ENST00000338399 PDCD2LQ9BRP1 358 aa16.63■□□□□ 0.25
CDK5RAP3-201ENST00000338399 MAF1Q9H063 256 aa16.63■□□□□ 0.25
CDK5RAP3-201ENST00000338399 R3HDMLQ9H3Y0 253 aa16.63■□□□□ 0.25
CDK5RAP3-201ENST00000338399 FSD2A1L4K1 749 aa16.63■□□□□ 0.25
CDK5RAP3-201ENST00000338399 MEIS1O00470 390 aa16.63■□□□□ 0.25
CDK5RAP3-201ENST00000338399 SLC25A27O95847 323 aa16.63■□□□□ 0.25
CDK5RAP3-201ENST00000338399 CCDC192P0DO97 292 aa16.63■□□□□ 0.25
CDK5RAP3-201ENST00000338399 MYCLP12524 364 aaPredicted RBP16.63■□□□□ 0.25
CDK5RAP3-201ENST00000338399 MRPS9P82933 396 aaKnown RBP16.63■□□□□ 0.25
CDK5RAP3-201ENST00000338399 PNOCQ13519 176 aa16.63■□□□□ 0.25
CDK5RAP3-201ENST00000338399 E2F4Q16254 413 aa16.63■□□□□ 0.25
CDK5RAP3-201ENST00000338399 SASS6Q6UVJ0 657 aa16.63■□□□□ 0.25
CDK5RAP3-201ENST00000338399 GRAMD1CQ8IYS0 662 aa16.63■□□□□ 0.25
CDK5RAP3-201ENST00000338399 CEP57L1Q8IYX8 460 aa16.63■□□□□ 0.25
CDK5RAP3-201ENST00000338399 IQUBQ8NA54 791 aa16.63■□□□□ 0.25
CDK5RAP3-201ENST00000338399 PLIN2Q99541 437 aa16.63■□□□□ 0.25
CDK5RAP3-201ENST00000338399 PYM1Q9BRP8 204 aaKnown RBP16.63■□□□□ 0.25
CDK5RAP3-201ENST00000338399 MMTAG2Q9BU76 263 aaKnown RBP16.63■□□□□ 0.25
CDK5RAP3-201ENST00000338399 DISC1Q9NRI5 854 aa16.63■□□□□ 0.25
CDK5RAP3-201ENST00000338399 KIAA1468Q9P260 1216 aa16.63■□□□□ 0.25
CDK5RAP3-201ENST00000338399 CCDC39Q9UFE4 941 aa16.63■□□□□ 0.25
CDK5RAP3-201ENST00000338399 SLFN14P0C7P3 912 aa16.62■□□□□ 0.25
CDK5RAP3-201ENST00000338399 ARP10275 920 aa16.62■□□□□ 0.25
CDK5RAP3-201ENST00000338399 ITGB5P18084 799 aa16.62■□□□□ 0.25
CDK5RAP3-201ENST00000338399 ERVK-9P63128 1117 aa16.62■□□□□ 0.25
CDK5RAP3-201ENST00000338399 ERVK-24P63145 666 aa16.62■□□□□ 0.25
CDK5RAP3-201ENST00000338399 MDM2Q00987 491 aaPredicted RBP16.62■□□□□ 0.25
CDK5RAP3-201ENST00000338399 TYRO3Q06418 890 aa16.62■□□□□ 0.25
CDK5RAP3-201ENST00000338399 KANK3Q6NY19 840 aa16.62■□□□□ 0.25
CDK5RAP3-201ENST00000338399 GTF3C2Q8WUA4 911 aaPredicted RBP16.62■□□□□ 0.25
CDK5RAP3-201ENST00000338399 USP25Q9UHP3 1055 aa16.62■□□□□ 0.25
CDK5RAP3-201ENST00000338399 TLL2Q9Y6L7 1015 aa16.62■□□□□ 0.25
CDK5RAP3-201ENST00000338399 PFASO15067 1338 aa16.61■□□□□ 0.25
CDK5RAP3-201ENST00000338399 STAT6P42226 847 aa16.61■□□□□ 0.25
CDK5RAP3-201ENST00000338399 SETQ01105 290 aaPredicted RBP16.61■□□□□ 0.25
CDK5RAP3-201ENST00000338399 RRAGBQ5VZM2 374 aa16.61■□□□□ 0.25
CDK5RAP3-201ENST00000338399 ELOA2Q8IYF1 753 aaPredicted RBP16.61■□□□□ 0.25
CDK5RAP3-201ENST00000338399 NSUN6Q8TEA1 469 aaKnown RBP16.61■□□□□ 0.25
CDK5RAP3-201ENST00000338399 WDR11Q9BZH6 1224 aa16.61■□□□□ 0.25
CDK5RAP3-201ENST00000338399 HOOK1Q9UJC3 728 aaKnown RBP16.61■□□□□ 0.25
CDK5RAP3-201ENST00000338399 UBIAD1Q9Y5Z9 338 aa16.61■□□□□ 0.25
CDK5RAP3-201ENST00000338399 TESPA1A2RU30 521 aaPredicted RBP16.61■□□□□ 0.25
CDK5RAP3-201ENST00000338399 NR3C2P08235 984 aa16.61■□□□□ 0.25
CDK5RAP3-201ENST00000338399 PRR29P0C7W0 189 aa16.61■□□□□ 0.25
CDK5RAP3-201ENST00000338399 COPB2P35606 906 aa16.61■□□□□ 0.25
CDK5RAP3-201ENST00000338399 AFMP43652 599 aa16.61■□□□□ 0.25
CDK5RAP3-201ENST00000338399 POSTNQ15063 836 aa16.61■□□□□ 0.25
CDK5RAP3-201ENST00000338399 KRT79Q5XKE5 535 aa16.61■□□□□ 0.25
CDK5RAP3-201ENST00000338399 PDXDC2PQ6P474 469 aa16.61■□□□□ 0.25
CDK5RAP3-201ENST00000338399 CALML4Q96GE6 196 aa16.61■□□□□ 0.25
CDK5RAP3-201ENST00000338399 PAGE5Q96GU1 130 aa16.61■□□□□ 0.25
CDK5RAP3-201ENST00000338399 NUDT12Q9BQG2 462 aa16.61■□□□□ 0.25
CDK5RAP3-201ENST00000338399 ZNF577Q9BSK1 485 aa16.61■□□□□ 0.25
CDK5RAP3-201ENST00000338399 RBSNQ9H1K0 784 aa16.61■□□□□ 0.25
CDK5RAP3-201ENST00000338399 ABT1Q9ULW3 272 aaKnown RBP16.61■□□□□ 0.25
CDK5RAP3-201ENST00000338399 ZNFX1Q9P2E3 1918 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms