RNA–Protein interactions for RNA: ENST00000324450.10

VEGFA-202, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-202ENST00000324450 KCNV1Q6PIU1 500 aa29.13■■■□□ 2.25
VEGFA-202ENST00000324450 SYNE3Q6ZMZ3 975 aa29.13■■■□□ 2.25
VEGFA-202ENST00000324450 SGMS1Q86VZ5 419 aa29.13■■■□□ 2.25
VEGFA-202ENST00000324450 PLEKHA8P1O95397 391 aa29.12■■■□□ 2.25
VEGFA-202ENST00000324450 MMP3P08254 477 aa29.12■■■□□ 2.25
VEGFA-202ENST00000324450 RXRAP19793 462 aa29.12■■■□□ 2.25
VEGFA-202ENST00000324450 KRT32Q14532 448 aa29.12■■■□□ 2.25
VEGFA-202ENST00000324450 NBPF20Q3BBV1 942 aa29.12■■■□□ 2.25
VEGFA-202ENST00000324450 TSGA10IPQ3SY00 556 aa29.12■■■□□ 2.25
VEGFA-202ENST00000324450 FAM47CQ5HY64 1035 aa29.12■■■□□ 2.25
VEGFA-202ENST00000324450 NFRKBQ6P4R8 1299 aa29.12■■■□□ 2.25
VEGFA-202ENST00000324450 VSIG10LQ86VR7 867 aa29.12■■■□□ 2.25
VEGFA-202ENST00000324450 SRBD1Q8N5C6 995 aaKnown RBP29.12■■■□□ 2.25
VEGFA-202ENST00000324450 NOC4LQ9BVI4 516 aaKnown RBP29.12■■■□□ 2.25
VEGFA-202ENST00000324450 MTMR10Q9NXD2 777 aa29.12■■■□□ 2.25
VEGFA-202ENST00000324450 PTPN11Q06124 597 aaPredicted RBP29.11■■■□□ 2.25
VEGFA-202ENST00000324450 LAMC2Q13753 1193 aa29.11■■■□□ 2.25
VEGFA-202ENST00000324450 PSRC1Q6PGN9 363 aaPredicted RBP29.11■■■□□ 2.25
VEGFA-202ENST00000324450 CUL5Q93034 780 aa29.11■■■□□ 2.25
VEGFA-202ENST00000324450 EMID1Q96A84 441 aaPredicted RBP29.11■■■□□ 2.25
VEGFA-202ENST00000324450 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.11■■■□□ 2.251e-12■■■□□ 14.7
VEGFA-202ENST00000324450 KIAA1217Q5T5P2 1943 aa29.11■■■□□ 2.25
VEGFA-202ENST00000324450 CASTP20810 708 aaKnown RBP29.1■■■□□ 2.25
VEGFA-202ENST00000324450 ZNF697Q5TEC3 545 aa29.1■■■□□ 2.25
VEGFA-202ENST00000324450 FANCBQ8NB91 859 aa29.1■■■□□ 2.25
VEGFA-202ENST00000324450 TRMT13Q9NUP7 481 aaKnown RBP29.1■■■□□ 2.25
VEGFA-202ENST00000324450 BAZ2BQ9UIF8 2168 aaKnown RBP29.1■■■□□ 2.25
VEGFA-202ENST00000324450 DGKDQ16760 1214 aa29.09■■■□□ 2.25
VEGFA-202ENST00000324450 TMEM240Q5SV17 173 aa29.09■■■□□ 2.25
VEGFA-202ENST00000324450 DHX32Q7L7V1 743 aaKnown RBP29.09■■■□□ 2.25
VEGFA-202ENST00000324450 MICU3Q86XE3 530 aa29.09■■■□□ 2.25
VEGFA-202ENST00000324450 DHX37Q8IY37 1157 aaKnown RBP29.09■■■□□ 2.25
VEGFA-202ENST00000324450 IL31RAQ8NI17 732 aa29.09■■■□□ 2.25
VEGFA-202ENST00000324450 IL23AQ9NPF7 189 aa29.09■■■□□ 2.25
VEGFA-202ENST00000324450 RGS20O76081 388 aa29.08■■■□□ 2.25
VEGFA-202ENST00000324450 TGFB3P10600 412 aa29.08■■■□□ 2.25
VEGFA-202ENST00000324450 TMTC3Q6ZXV5 915 aa29.08■■■□□ 2.25
VEGFA-202ENST00000324450 RAB11FIP4Q86YS3 637 aa29.08■■■□□ 2.25
VEGFA-202ENST00000324450 RASEFQ8IZ41 740 aa29.08■■■□□ 2.25
VEGFA-202ENST00000324450 CMTR1Q8N1G2 835 aaKnown RBP29.08■■■□□ 2.25
VEGFA-202ENST00000324450 PPTC7Q8NI37 304 aa29.08■■■□□ 2.25
VEGFA-202ENST00000324450 SMARCC2Q8TAQ2 1214 aa29.08■■■□□ 2.25
VEGFA-202ENST00000324450 UMODL1Q5DID0 1318 aa29.08■■■□□ 2.25
VEGFA-202ENST00000324450 SCN10AQ9Y5Y9 1956 aa29.08■■■□□ 2.25
VEGFA-202ENST00000324450 STAM2O75886 525 aa29.07■■■□□ 2.24
VEGFA-202ENST00000324450 HMGB1P09429 215 aaKnown RBP29.07■■■□□ 2.24
VEGFA-202ENST00000324450 ACRP10323 421 aa29.07■■■□□ 2.24
VEGFA-202ENST00000324450 CCL23P55773 120 aa29.07■■■□□ 2.24
VEGFA-202ENST00000324450 EXOSC10Q01780 885 aaKnown RBP29.07■■■□□ 2.24
VEGFA-202ENST00000324450 FRMPD4Q14CM0 1322 aa29.07■■■□□ 2.24
VEGFA-202ENST00000324450 C16orf59Q7L2K0 433 aa29.07■■■□□ 2.24
VEGFA-202ENST00000324450 PIK3CDO00329 1044 aa29.06■■■□□ 2.24
VEGFA-202ENST00000324450 CYP2C9P11712 490 aa29.06■■■□□ 2.24
VEGFA-202ENST00000324450 CHMP4BP1P59074 171 aa29.06■■■□□ 2.24
VEGFA-202ENST00000324450 ADCK5Q3MIX3 580 aa29.06■■■□□ 2.24
VEGFA-202ENST00000324450 GNPTABQ3T906 1256 aa29.06■■■□□ 2.24
VEGFA-202ENST00000324450 APOA5Q6Q788 366 aa29.06■■■□□ 2.24
VEGFA-202ENST00000324450 ZNF365Q70YC5 407 aa29.06■■■□□ 2.24
VEGFA-202ENST00000324450 RBM28Q9NW13 759 aaKnown RBP29.06■■■□□ 2.24
VEGFA-202ENST00000324450 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.05■■■□□ 2.24
VEGFA-202ENST00000324450 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.05■■■□□ 2.24
VEGFA-202ENST00000324450 CELF3Q5SZQ8 465 aaKnown RBP29.05■■■□□ 2.24
VEGFA-202ENST00000324450 CCDC82Q8N4S0 544 aa29.05■■■□□ 2.24
VEGFA-202ENST00000324450 KATNAL1Q9BW62 490 aa29.05■■■□□ 2.24
VEGFA-202ENST00000324450 WNT8AQ9H1J5 351 aa29.05■■■□□ 2.24
VEGFA-202ENST00000324450 MTIF3Q9H2K0 278 aaKnown RBP29.05■■■□□ 2.24
VEGFA-202ENST00000324450 NOD1Q9Y239 953 aa29.05■■■□□ 2.24
VEGFA-202ENST00000324450 STXBP5LQ9Y2K9 1186 aa29.05■■■□□ 2.24
VEGFA-202ENST00000324450 GGPS1O95749 300 aa29.04■■■□□ 2.24
VEGFA-202ENST00000324450 MYSM1Q5VVJ2 828 aa29.04■■■□□ 2.24
VEGFA-202ENST00000324450 USP17L6PQ6QN14 398 aa29.04■■■□□ 2.24
VEGFA-202ENST00000324450 RPUSD2Q8IZ73 545 aaKnown RBP29.04■■■□□ 2.24
VEGFA-202ENST00000324450 PPP1R13LQ8WUF5 828 aa29.04■■■□□ 2.24
VEGFA-202ENST00000324450 TCEANC2Q96MN5 208 aa29.04■■■□□ 2.24
VEGFA-202ENST00000324450 FAM161BQ96MY7 647 aa29.04■■■□□ 2.24
VEGFA-202ENST00000324450 MEIS2O14770 477 aa29.03■■■□□ 2.24
VEGFA-202ENST00000324450 ZBTB43O43298 467 aa29.03■■■□□ 2.24
VEGFA-202ENST00000324450 FGBP02675 491 aa29.03■■■□□ 2.24
VEGFA-202ENST00000324450 SESTD1Q86VW0 696 aa29.03■■■□□ 2.24
VEGFA-202ENST00000324450 KAT2BQ92831 832 aa29.03■■■□□ 2.24
VEGFA-202ENST00000324450 ZFP91Q96JP5 570 aaPredicted RBP29.03■■■□□ 2.24
VEGFA-202ENST00000324450 SPATA33Q96N06 139 aa29.03■■■□□ 2.24
VEGFA-202ENST00000324450 PSTPIP2Q9H939 334 aa29.03■■■□□ 2.24
VEGFA-202ENST00000324450 UBA1P22314 1058 aaKnown RBP29.02■■■□□ 2.24
VEGFA-202ENST00000324450 MRPS9P82933 396 aaKnown RBP29.02■■■□□ 2.24
VEGFA-202ENST00000324450 RASIP1Q5U651 963 aa29.02■■■□□ 2.24
VEGFA-202ENST00000324450 XRRA1Q6P2D8 792 aa29.02■■■□□ 2.24
VEGFA-202ENST00000324450 HERVK_113Q902F9 699 aa29.02■■■□□ 2.24
VEGFA-202ENST00000324450 INPP4AQ96PE3 977 aaPredicted RBP29.02■■■□□ 2.24
VEGFA-202ENST00000324450 MLXIPQ9HAP2 919 aa29.02■■■□□ 2.24
VEGFA-202ENST00000324450 LAMA2P24043 3122 aaKnown RBP29.01■■■□□ 2.24
VEGFA-202ENST00000324450 TMEM265A0A087WTH1 108 aa29.01■■■□□ 2.23
VEGFA-202ENST00000324450 hCG_1642624A0A1W2PR95 340 aa29.01■■■□□ 2.23
VEGFA-202ENST00000324450 PPFIA4O75335 1185 aa29.01■■■□□ 2.23
VEGFA-202ENST00000324450 REC8O95072 547 aa29.01■■■□□ 2.23
VEGFA-202ENST00000324450 FGD1P98174 961 aa29.01■■■□□ 2.23
VEGFA-202ENST00000324450 SP2Q02086 613 aa29.01■■■□□ 2.23
VEGFA-202ENST00000324450 RTN1Q16799 776 aa29.01■■■□□ 2.23
VEGFA-202ENST00000324450 KCNB2Q92953 911 aa29.01■■■□□ 2.23
VEGFA-202ENST00000324450 SCLYQ96I15 445 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms