RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 HOXA10P31260 410 aaPredicted RBP21■□□□□ 0.95
SNX4-201ENST00000251775 DNM2P50570 870 aa21■□□□□ 0.95
SNX4-201ENST00000251775 CYP27A1Q02318 531 aa21■□□□□ 0.95
SNX4-201ENST00000251775 ZNF572Q7Z3I7 529 aaPredicted RBP21■□□□□ 0.95
SNX4-201ENST00000251775 CABP7Q86V35 215 aa21■□□□□ 0.95
SNX4-201ENST00000251775 SLF2Q8IX21 1173 aa21■□□□□ 0.95
SNX4-201ENST00000251775 CCDC170Q8IYT3 715 aa21■□□□□ 0.95
SNX4-201ENST00000251775 TBC1D22AQ8WUA7 517 aa21■□□□□ 0.95
SNX4-201ENST00000251775 THAP9Q9H5L6 903 aa21■□□□□ 0.95
SNX4-201ENST00000251775 B4DLN1 442 aa20.99■□□□□ 0.95
SNX4-201ENST00000251775 MYL1P05976 194 aa20.99■□□□□ 0.95
SNX4-201ENST00000251775 SMARCA1P28370 1054 aa20.99■□□□□ 0.95
SNX4-201ENST00000251775 GNA11P29992 359 aa20.99■□□□□ 0.95
SNX4-201ENST00000251775 KLK7P49862 253 aa20.99■□□□□ 0.95
SNX4-201ENST00000251775 SEPT12Q8IYM1 358 aa20.99■□□□□ 0.95
SNX4-201ENST00000251775 GIMAP8Q8ND71 665 aaPredicted RBP20.99■□□□□ 0.95
SNX4-201ENST00000251775 SEC63Q9UGP8 760 aaKnown RBP20.99■□□□□ 0.95
SNX4-201ENST00000251775 IPO7O95373 1038 aaKnown RBP20.99■□□□□ 0.95
SNX4-201ENST00000251775 GTF2IP78347 998 aa20.99■□□□□ 0.95
SNX4-201ENST00000251775 NEK8Q86SG6 692 aa20.99■□□□□ 0.95
SNX4-201ENST00000251775 SECISBP2LQ93073 1101 aaKnown RBP20.99■□□□□ 0.95
SNX4-201ENST00000251775 ARL8AQ96BM9 186 aa20.99■□□□□ 0.95
SNX4-201ENST00000251775 FRMPD2Q68DX3 1309 aaPredicted RBP20.98■□□□□ 0.95
SNX4-201ENST00000251775 ZNF263O14978 683 aa20.98■□□□□ 0.95
SNX4-201ENST00000251775 EPB41P11171 864 aaKnown RBP20.98■□□□□ 0.95
SNX4-201ENST00000251775 TRIM21P19474 475 aaKnown RBP20.98■□□□□ 0.95
SNX4-201ENST00000251775 INPP5BP32019 993 aa20.98■□□□□ 0.95
SNX4-201ENST00000251775 VAV2P52735 878 aa20.98■□□□□ 0.95
SNX4-201ENST00000251775 SKOR1P84550 965 aa20.98■□□□□ 0.95
SNX4-201ENST00000251775 TTMPQ5BVD1 217 aa20.98■□□□□ 0.95
SNX4-201ENST00000251775 SOGA3Q5TF21 947 aa20.98■□□□□ 0.95
SNX4-201ENST00000251775 POTEDQ86YR6 584 aa20.98■□□□□ 0.95
SNX4-201ENST00000251775 TSEN2Q8NCE0 465 aaKnown RBP20.98■□□□□ 0.95
SNX4-201ENST00000251775 TBCKQ8TEA7 893 aa20.98■□□□□ 0.95
SNX4-201ENST00000251775 SMCR8Q8TEV9 937 aaPredicted RBP20.98■□□□□ 0.95
SNX4-201ENST00000251775 RUBCNQ92622 972 aa20.98■□□□□ 0.95
SNX4-201ENST00000251775 AK8Q96MA6 479 aa20.98■□□□□ 0.95
SNX4-201ENST00000251775 ZNHIT6Q9NWK9 470 aaKnown RBP20.98■□□□□ 0.95
SNX4-201ENST00000251775 TMEM260Q9NX78 707 aa20.98■□□□□ 0.95
SNX4-201ENST00000251775 BIN2Q9UBW5 565 aaPredicted RBP20.98■□□□□ 0.95
SNX4-201ENST00000251775 SAMM50Q9Y512 469 aa20.98■□□□□ 0.95
SNX4-201ENST00000251775 OPA1O60313 960 aa20.98■□□□□ 0.95
SNX4-201ENST00000251775 PDHBP11177 359 aa20.98■□□□□ 0.95
SNX4-201ENST00000251775 MRPS25P82663 173 aaKnown RBP20.98■□□□□ 0.95
SNX4-201ENST00000251775 ITIH3Q06033 890 aa20.98■□□□□ 0.95
SNX4-201ENST00000251775 KIF5AQ12840 1032 aa20.98■□□□□ 0.95
SNX4-201ENST00000251775 TRIM47Q96LD4 638 aa20.98■□□□□ 0.95
SNX4-201ENST00000251775 CRAMP1Q96RY5 1269 aa20.98■□□□□ 0.95
SNX4-201ENST00000251775 RIOX1Q9H6W3 641 aa20.98■□□□□ 0.95
SNX4-201ENST00000251775 LRRC37AA6NMS7 1700 aa20.97■□□□□ 0.95
SNX4-201ENST00000251775 ONECUT3O60422 494 aaPredicted RBP20.97■□□□□ 0.95
SNX4-201ENST00000251775 PICALMQ13492 652 aa20.97■□□□□ 0.95
SNX4-201ENST00000251775 SPATA4Q8NEY3 305 aa20.97■□□□□ 0.95
SNX4-201ENST00000251775 EXOC1Q9NV70 894 aa20.97■□□□□ 0.95
SNX4-201ENST00000251775 RIMBP2O15034 1052 aa20.97■□□□□ 0.95
SNX4-201ENST00000251775 TECP42680 631 aa20.97■□□□□ 0.95
SNX4-201ENST00000251775 ZBED6P86452 979 aa20.97■□□□□ 0.95
SNX4-201ENST00000251775 SLC7A5Q01650 507 aa20.97■□□□□ 0.95
SNX4-201ENST00000251775 TTI2Q6NXR4 508 aa20.97■□□□□ 0.95
SNX4-201ENST00000251775 CCDC91Q7Z6B0 441 aa20.97■□□□□ 0.95
SNX4-201ENST00000251775 CUEDC2Q9H467 287 aa20.97■□□□□ 0.95
SNX4-201ENST00000251775 LRWD1Q9UFC0 647 aa20.97■□□□□ 0.95
SNX4-201ENST00000251775 CAPN6Q9Y6Q1 641 aa20.97■□□□□ 0.95
SNX4-201ENST00000251775 POLRMTO00411 1230 aaKnown RBP20.96■□□□□ 0.95
SNX4-201ENST00000251775 GSCP56915 257 aaPredicted RBP20.96■□□□□ 0.95
SNX4-201ENST00000251775 CLEC10AQ8IUN9 316 aa20.96■□□□□ 0.95
SNX4-201ENST00000251775 REXO1Q8N1G1 1221 aaKnown RBP20.96■□□□□ 0.95
SNX4-201ENST00000251775 TUBGCP2Q9BSJ2 902 aa20.96■□□□□ 0.95
SNX4-201ENST00000251775 MMTAG2Q9BU76 263 aaKnown RBP20.96■□□□□ 0.95
SNX4-201ENST00000251775 NUP58Q9BVL2 599 aa20.96■□□□□ 0.95
SNX4-201ENST00000251775 MTMR4Q9NYA4 1195 aa20.96■□□□□ 0.95
SNX4-201ENST00000251775 MAGEC2Q9UBF1 373 aaPredicted RBP20.96■□□□□ 0.95
SNX4-201ENST00000251775 PSMA7O14818 248 aa20.96■□□□□ 0.95
SNX4-201ENST00000251775 GABPAQ06546 454 aa20.96■□□□□ 0.95
SNX4-201ENST00000251775 KRT26Q7Z3Y9 468 aa20.96■□□□□ 0.95
SNX4-201ENST00000251775 CNPY4Q8N129 248 aa20.96■□□□□ 0.95
SNX4-201ENST00000251775 LRRC47Q8N1G4 583 aaKnown RBP20.96■□□□□ 0.95
SNX4-201ENST00000251775 RETREG2Q8NC44 543 aa20.96■□□□□ 0.95
SNX4-201ENST00000251775 TRIM58Q8NG06 486 aa20.96■□□□□ 0.95
SNX4-201ENST00000251775 TRIM9Q9C026 710 aa20.96■□□□□ 0.95
SNX4-201ENST00000251775 ESYT2A0FGR8 921 aa20.95■□□□□ 0.94
SNX4-201ENST00000251775 F8W031 263 aaPredicted RBP20.95■□□□□ 0.94
SNX4-201ENST00000251775 AKR1B1P15121 316 aa20.95■□□□□ 0.94
SNX4-201ENST00000251775 EPHB4P54760 987 aa20.95■□□□□ 0.94
SNX4-201ENST00000251775 MEX3CQ5U5Q3 659 aaKnown RBP20.95■□□□□ 0.94
SNX4-201ENST00000251775 ALS2CLQ60I27 953 aa20.95■□□□□ 0.94
SNX4-201ENST00000251775 COA7Q96BR5 231 aa20.95■□□□□ 0.94
SNX4-201ENST00000251775 DUSP9Q99956 384 aaKnown RBP20.95■□□□□ 0.94
SNX4-201ENST00000251775 TSGA10Q9BZW7 698 aa20.95■□□□□ 0.94
SNX4-201ENST00000251775 PLIN4Q96Q06 1357 aa20.95■□□□□ 0.94
SNX4-201ENST00000251775 AFF2P51816 1311 aa20.95■□□□□ 0.94
SNX4-201ENST00000251775 EIF6P56537 245 aaKnown RBP20.95■□□□□ 0.94
SNX4-201ENST00000251775 PDCLQ13371 301 aa20.95■□□□□ 0.94
SNX4-201ENST00000251775 EMBQ6PCB8 327 aa20.95■□□□□ 0.94
SNX4-201ENST00000251775 GPATCH11Q8N954 259 aa20.95■□□□□ 0.94
SNX4-201ENST00000251775 MAGEF1Q9HAY2 307 aa20.95■□□□□ 0.94
SNX4-201ENST00000251775 DDX4Q9NQI0 724 aaKnown RBP20.95■□□□□ 0.94
SNX4-201ENST00000251775 KLRG2A4D1S0 409 aaPredicted RBP20.94■□□□□ 0.94
SNX4-201ENST00000251775 PRLRP16471 622 aa20.94■□□□□ 0.94
SNX4-201ENST00000251775 MNAT1P51948 309 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms