RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Tsc22d4Q9EQN3 387 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Kiaa1522A2A7S8 1013 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Gm10251J3QPM5 127 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Gm8229K7N749 213 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 SlkO54988 1233 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 FesP16879 822 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Mxi1P50540 228 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 CiitaP79621 1155 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Sec1P97353 368 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Tnks2Q3UES3 1166 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Eef2kmtQ3UZW7 335 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 NkaplQ5SZT7 395 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Zcchc4Q8BKW4 512 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Rhot2Q8JZN7 620 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Q91WD4 421 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Rufy3Q9D394 469 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Gm2916Q9D9B9 127 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 KdrP35918 1367 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Bpifb4A2BGH0 617 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Gm3618D3Z4P5 127 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Rabl2E9Q9D5 223 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Scarb2O35114 478 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Cwc27Q3TKY6 469 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Ksr2Q3UVC0 959 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 P4ha2Q60716 537 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Ksr1Q61097 873 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Cd180Q62192 661 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Tekt3Q6X6Z7 490 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 1700010I14RikQ7TPG0 532 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Rps6ka6Q7TPS0 764 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Cd99l2Q8BIF0 237 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Tada3Q8R0L9 432 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Gramd1aQ8VEF1 722 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Iqcf3Q9D498 203 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Lrrc46Q9DAP0 323 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Mbtps1Q9WTZ2 1052 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Ift172Q6VH22 1749 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Cps1Q8C196 1500 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Gm4841E9QAA8 417 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Gm5689F6Y2A6 97 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Zfp105G3X9I0 524 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Nek2O35942 443 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Smpd2O70572 419 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 ProcP33587 460 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Nkx2-5P42582 318 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Npr3P70180 536 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Olfml2bQ3V1G4 746 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 OclnQ61146 521 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Eif4g2Q62448 906 aaKnown RBP10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Q6PAC4 1279 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 DstykQ6XUX1 927 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Avl9Q80U56 649 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Spon1Q8VCC9 807 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Sapcd1Q9CY86 146 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Tceal9Q9DD24 104 aa10.1□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Sycp2lA0A0M3U1B0 842 aa10.09□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Gm45233A0A0N4SVE0 221 aa10.09□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Serpina3cP29621 417 aa10.09□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Zbtb14Q08376 449 aa10.09□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Esyt1Q3U7R1 1092 aaKnown RBP10.09□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Trmt10cQ3UFY8 414 aaKnown RBP10.09□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Trim75Q3UWZ0 467 aa10.09□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Ccdc116Q80X53 541 aa10.09□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Zfp438Q8BFX2 798 aa10.09□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Cdkn2aipQ8BI72 563 aa10.09□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Slc41a1Q8BJA2 512 aa10.09□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Armc6Q8BNU0 468 aa10.09□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Phf20l1Q8CCJ9 1013 aa10.09□□□□□ -0.79
Upf3b-201ENSMUST00000076265 ZwilchQ8R060 589 aa10.09□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Gtf2h3Q8VD76 309 aa10.09□□□□□ -0.79
Upf3b-201ENSMUST00000076265 FcrlaQ920A9 352 aa10.09□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Mmtag2Q99LX5 260 aaKnown RBP10.09□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Fam162aQ9D6U8 155 aa10.09□□□□□ -0.79
Upf3b-201ENSMUST00000076265 EtfbQ9DCW4 255 aaKnown RBP10.09□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Efcc1Q9JJF6 558 aa10.09□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Dapk1Q80YE7 1442 aa10.09□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Pik3c2aQ61194 1686 aa10.09□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Gm28043E0CXC2 719 aa10.08□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Zkscan7E9PVW1 718 aa10.08□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Casq2O09161 415 aa10.08□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Gpr3P35413 330 aa10.08□□□□□ -0.8
Upf3b-201ENSMUST00000076265 HpdP49429 393 aa10.08□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Gdi1P50396 447 aa10.08□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Dsc1P55849 886 aa10.08□□□□□ -0.8
Upf3b-201ENSMUST00000076265 L3mbtl2P59178 703 aa10.08□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Q3UJC8 639 aa10.08□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Ppp1r9bQ6R891 817 aaKnown RBP10.08□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Olfr792Q7TRH9 311 aa10.08□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Ints8Q80V86 995 aa10.08□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Nol12Q8BG17 217 aa10.08□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Taf2Q8C176 1104 aa10.08□□□□□ -0.8
Upf3b-201ENSMUST00000076265 SrrdQ8K2M3 249 aa10.08□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Ubxn1Q922Y1 297 aa10.08□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Wdr73Q9CWR1 371 aa10.08□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Gtf2ird1Q9JI57 1104 aaKnown RBP10.08□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Mlh1Q9JK91 760 aa10.08□□□□□ -0.8
Upf3b-201ENSMUST00000076265 ApipQ9WVQ5 241 aa10.08□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Rasgrp1Q9Z1S3 795 aa10.08□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Gm3893E9Q1I1 302 aa10.08□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Tmem132bF7BAB2 1078 aa10.08□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 71.6 ms