RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W YER078W-AQ3E7A2 54 aa3.91□□□□□ -1.78
SSU72YNL222W RAV1P47104 1357 aa3.9□□□□□ -1.78
SSU72YNL222W TOP1P04786 769 aa3.9□□□□□ -1.79
SSU72YNL222W WBP1P33767 430 aaKnown RBP3.9□□□□□ -1.79
SSU72YNL222W KEL1P38853 1164 aaKnown RBP3.9□□□□□ -1.79
SSU72YNL222W YGR066CP53242 292 aa3.9□□□□□ -1.79
SSU72YNL222W FIN1Q03898 291 aa3.9□□□□□ -1.79
SSU72YNL222W KEL3Q08979 651 aaPredicted RBP3.9□□□□□ -1.79
SSU72YNL222W AVL9Q12500 764 aa3.9□□□□□ -1.79
SSU72YNL222W HSC82P15108 705 aaKnown RBP3.89□□□□□ -1.79
SSU72YNL222W OLE1P21147 510 aaKnown RBP3.89□□□□□ -1.79
SSU72YNL222W PRD1P25375 712 aa3.89□□□□□ -1.79
SSU72YNL222W ATP11P32453 318 aa3.89□□□□□ -1.79
SSU72YNL222W NOP4P37838 685 aaKnown RBP3.89□□□□□ -1.79
SSU72YNL222W SRO77P38163 1010 aa3.89□□□□□ -1.79
SSU72YNL222W MBB1P39534 108 aa3.89□□□□□ -1.79
SSU72YNL222W FAU1P40099 211 aa3.89□□□□□ -1.79
SSU72YNL222W DOT5P40553 215 aa3.89□□□□□ -1.79
SSU72YNL222W MKT1P40850 830 aaKnown RBP3.89□□□□□ -1.79
SSU72YNL222W CAF130P53280 1122 aaPredicted RBP3.89□□□□□ -1.79
SSU72YNL222W PIR3Q03180 325 aa3.89□□□□□ -1.79
SSU72YNL222W LPD1P09624 499 aaKnown RBP3.88□□□□□ -1.79
SSU72YNL222W RFS1P38234 210 aaKnown RBP3.88□□□□□ -1.79
SSU72YNL222W MUM2P38236 366 aa3.88□□□□□ -1.79
SSU72YNL222W PET130P47065 347 aa3.88□□□□□ -1.79
SSU72YNL222W CWC22P53333 577 aaKnown RBP3.88□□□□□ -1.79
SSU72YNL222W VPS75P53853 264 aa3.88□□□□□ -1.79
SSU72YNL222W ARK1P53974 638 aa3.88□□□□□ -1.79
SSU72YNL222W BUB3P26449 341 aa3.87□□□□□ -1.79
SSU72YNL222W FRE2P36033 711 aa3.87□□□□□ -1.79
SSU72YNL222W ERP2P39704 215 aa3.87□□□□□ -1.79
SSU72YNL222W TMA108P40462 946 aa3.87□□□□□ -1.79
SSU72YNL222W YIL067CP40514 678 aa3.87□□□□□ -1.79
SSU72YNL222W GCD10P41814 478 aa3.87□□□□□ -1.79
SSU72YNL222W AVT4P50944 713 aa3.87□□□□□ -1.79
SSU72YNL222W YGL242CP53066 181 aa3.87□□□□□ -1.79
SSU72YNL222W YOR387CQ08910 206 aa3.87□□□□□ -1.79
SSU72YNL222W HIP1P06775 603 aa3.86□□□□□ -1.79
SSU72YNL222W MRP4P32902 394 aa3.86□□□□□ -1.79
SSU72YNL222W SYG1P40528 902 aa3.86□□□□□ -1.79
SSU72YNL222W POP1P41812 875 aa3.86□□□□□ -1.79
SSU72YNL222W SHE10P53075 577 aa3.86□□□□□ -1.79
SSU72YNL222W MFB1Q04922 465 aa3.86□□□□□ -1.79
SSU72YNL222W DFR1P07807 211 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
SSU72YNL222W CHS1P08004 1131 aa3.85□□□□□ -1.79
SSU72YNL222W GFD2P25370 566 aaKnown RBP3.85□□□□□ -1.79
SSU72YNL222W LDB16P25587 256 aa3.85□□□□□ -1.79
SSU72YNL222W MFT1P33441 392 aaKnown RBP3.85□□□□□ -1.79
SSU72YNL222W RSM22P36056 628 aa3.85□□□□□ -1.79
SSU72YNL222W MRPL4P36517 319 aa3.85□□□□□ -1.79
SSU72YNL222W SLG1P54867 378 aa3.85□□□□□ -1.79
SSU72YNL222W NAM9P27929 486 aa3.84□□□□□ -1.79
SSU72YNL222W DEG1P31115 442 aaKnown RBP3.84□□□□□ -1.79
SSU72YNL222W NDI1P32340 513 aa3.84□□□□□ -1.79
SSU72YNL222W NDT80P38830 627 aa3.84□□□□□ -1.79
SSU72YNL222W ART5P53244 586 aaKnown RBP3.84□□□□□ -1.79
SSU72YNL222W ARE2P53629 642 aaKnown RBP3.84□□□□□ -1.79
SSU72YNL222W CAF40P53829 373 aa3.84□□□□□ -1.79
SSU72YNL222W YDL007C-AQ2V2Q0 85 aa3.84□□□□□ -1.79
SSU72YNL222W BRR1Q99177 341 aaPredicted RBP3.84□□□□□ -1.79
SSU72YNL222W FOB1O13329 566 aa3.83□□□□□ -1.8
SSU72YNL222W GCN4P03069 281 aa3.83□□□□□ -1.8
SSU72YNL222W RPL31BP0C2H9 113 aaKnown RBP3.83□□□□□ -1.8
SSU72YNL222W MET8P15807 274 aa3.83□□□□□ -1.8
SSU72YNL222W HEM15P16622 393 aa3.83□□□□□ -1.8
SSU72YNL222W MRE11P32829 692 aa3.83□□□□□ -1.8
SSU72YNL222W CST26P38226 397 aa3.83□□□□□ -1.8
SSU72YNL222W YEL057CP39983 233 aa3.83□□□□□ -1.8
SSU72YNL222W YFL067WP43537 175 aa3.83□□□□□ -1.8
SSU72YNL222W RRT5P43607 289 aa3.83□□□□□ -1.8
SSU72YNL222W OCA1P50946 238 aaPredicted RBP3.83□□□□□ -1.8
SSU72YNL222W ADD37Q03233 198 aa3.83□□□□□ -1.8
SSU72YNL222W YDR239CQ03780 787 aa3.83□□□□□ -1.8
SSU72YNL222W PDS5Q04264 1277 aa3.83□□□□□ -1.8
SSU72YNL222W RRP12Q12754 1228 aaKnown RBP3.83□□□□□ -1.8
SSU72YNL222W SPT15P13393 240 aaKnown RBP3.82□□□□□ -1.8
SSU72YNL222W GLC7P32598 312 aaKnown RBP3.82□□□□□ -1.8
SSU72YNL222W YBL059WP34224 193 aa3.82□□□□□ -1.8
SSU72YNL222W YBR225WP38321 900 aa3.82□□□□□ -1.8
SSU72YNL222W YMR147WP40218 223 aaKnown RBP3.82□□□□□ -1.8
SSU72YNL222W MET28P40573 187 aa3.82□□□□□ -1.8
SSU72YNL222W RMD8P43620 662 aa3.82□□□□□ -1.8
SSU72YNL222W PBA1Q05778 276 aa3.82□□□□□ -1.8
SSU72YNL222W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
SSU72YNL222W RLP24Q07915 199 aaKnown RBP3.82□□□□□ -1.8
SSU72YNL222W THP3Q12049 470 aaKnown RBP3.82□□□□□ -1.8
SSU72YNL222W ISC1P40015 477 aaKnown RBP3.81□□□□□ -1.8
SSU72YNL222W POP6P53218 158 aa3.81□□□□□ -1.8
SSU72YNL222W ELP3Q02908 557 aaKnown RBP3.81□□□□□ -1.8
SSU72YNL222W HEL2Q05580 639 aaKnown RBP3.81□□□□□ -1.8
SSU72YNL222W ERV2Q12284 196 aa3.81□□□□□ -1.8
SSU72YNL222W YML133CQ03099 1374 aa3.8□□□□□ -1.8
SSU72YNL222W YLL067CQ07888 1374 aa3.8□□□□□ -1.8
SSU72YNL222W YLL066CQ99208 1374 aa3.8□□□□□ -1.8
SSU72YNL222W LEU4P06208 619 aaKnown RBP3.8□□□□□ -1.8
SSU72YNL222W YIM1P28625 365 aa3.8□□□□□ -1.8
SSU72YNL222W YEL045CP32616 141 aa3.8□□□□□ -1.8
SSU72YNL222W NAT2P37293 288 aa3.8□□□□□ -1.8
SSU72YNL222W DED81P38707 554 aaKnown RBP3.8□□□□□ -1.8
SSU72YNL222W PRE5P40302 234 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 75.5 ms