RNA–Protein interactions for RNA: YLR447C

VMA6, Transcript of Subunit d of the V0 integral membrane domain of V-ATPase, yeast

Gene VMA6, Length 1,038 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA6	YLR447C	YBL055C	P34220	418 aa	Predicted RBP	3.18	□□□□□ -1.9
VMA6	YLR447C	YER010C	P40011	234 aa		3.18	□□□□□ -1.9
VMA6	YLR447C	YML6	P51998	286 aa		3.18	□□□□□ -1.9
VMA6	YLR447C	DSD1	P53095	428 aa		3.18	□□□□□ -1.9
VMA6	YLR447C	CBK1	P53894	756 aa		3.18	□□□□□ -1.9
VMA6	YLR447C	EFM6	P53970	246 aa		3.18	□□□□□ -1.9
VMA6	YLR447C	ARK1	P53974	638 aa		3.18	□□□□□ -1.9
VMA6	YLR447C	MHR1	Q06630	226 aa		3.18	□□□□□ -1.9
VMA6	YLR447C	YDL057W	Q07379	328 aa		3.18	□□□□□ -1.9
VMA6	YLR447C	RRG7	Q08774	242 aa	Predicted RBP	3.18	□□□□□ -1.9
VMA6	YLR447C	SMC6	Q12749	1114 aa		3.18	□□□□□ -1.9
VMA6	YLR447C	FUM1	P08417	488 aa	Known RBP	3.17	□□□□□ -1.9
VMA6	YLR447C	NAT1	P12945	854 aa	Known RBP	3.17	□□□□□ -1.9
VMA6	YLR447C	RED1	P14291	827 aa		3.17	□□□□□ -1.9
VMA6	YLR447C	TPM1	P17536	199 aa	Known RBP	3.17	□□□□□ -1.9
VMA6	YLR447C	PRE8	P23639	250 aa		3.17	□□□□□ -1.9
VMA6	YLR447C	RPC53	P25441	422 aa		3.17	□□□□□ -1.9
VMA6	YLR447C	KRR1	P25586	316 aa	Predicted RBP	3.17	□□□□□ -1.9
VMA6	YLR447C	IMG1	P25626	169 aa		3.17	□□□□□ -1.9
VMA6	YLR447C	DBF4	P32325	704 aa		3.17	□□□□□ -1.9
VMA6	YLR447C	PRS1	P32895	427 aa	Known RBP	3.17	□□□□□ -1.9
VMA6	YLR447C	BYE1	P36106	594 aa		3.17	□□□□□ -1.9
VMA6	YLR447C	LYS14	P40971	790 aa		3.17	□□□□□ -1.9
VMA6	YLR447C	ATP22	P50273	684 aa	Predicted RBP	3.17	□□□□□ -1.9
VMA6	YLR447C	APJ1	P53940	528 aa		3.17	□□□□□ -1.9
VMA6	YLR447C	ELP3	Q02908	557 aa	Known RBP	3.17	□□□□□ -1.9
VMA6	YLR447C	MFB1	Q04922	465 aa		3.17	□□□□□ -1.9
VMA6	YLR447C	PUP3	P25451	205 aa	Known RBP	3.16	□□□□□ -1.9
VMA6	YLR447C	YIM1	P28625	365 aa		3.16	□□□□□ -1.9
VMA6	YLR447C	ARO2	P28777	376 aa	Known RBP	3.16	□□□□□ -1.9
VMA6	YLR447C	UTR4	P32626	227 aa		3.16	□□□□□ -1.9
VMA6	YLR447C	NPL6	P32832	435 aa		3.16	□□□□□ -1.9
VMA6	YLR447C	NUP133	P36161	1157 aa		3.16	□□□□□ -1.9
VMA6	YLR447C	RFS1	P38234	210 aa	Known RBP	3.16	□□□□□ -1.9
VMA6	YLR447C	PES4	P39684	611 aa		3.16	□□□□□ -1.9
VMA6	YLR447C	JEM1	P40358	645 aa		3.16	□□□□□ -1.9
VMA6	YLR447C	GPI8	P49018	411 aa		3.16	□□□□□ -1.9
VMA6	YLR447C	RIX7	Q07844	837 aa	Known RBP	3.16	□□□□□ -1.9
VMA6	YLR447C	SFI1	Q12369	946 aa		3.16	□□□□□ -1.9
VMA6	YLR447C	SYN8	P31377	255 aa		3.15	□□□□□ -1.91
VMA6	YLR447C	YBR225W	P38321	900 aa		3.15	□□□□□ -1.91
VMA6	YLR447C	LRP1	P38801	184 aa	Known RBP	3.15	□□□□□ -1.91
VMA6	YLR447C	YHR210C	P38893	341 aa		3.15	□□□□□ -1.91
VMA6	YLR447C	ARF3	P40994	183 aa	RIP-Chip data	3.15	□□□□□ -1.91	not detected
VMA6	YLR447C	GWT1	P47026	490 aa		3.15	□□□□□ -1.91
VMA6	YLR447C	TIS11	P47977	285 aa		3.15	□□□□□ -1.91
VMA6	YLR447C	CWC22	P53333	577 aa	Known RBP	3.15	□□□□□ -1.91
VMA6	YLR447C	CAF40	P53829	373 aa		3.15	□□□□□ -1.91
VMA6	YLR447C	YLR152C	P54072	576 aa		3.15	□□□□□ -1.91
VMA6	YLR447C	SNO4	Q04902	237 aa		3.15	□□□□□ -1.91
VMA6	YLR447C	RLP24	Q07915	199 aa	Known RBP	3.15	□□□□□ -1.91
VMA6	YLR447C	HSP33	Q08914	237 aa	Known RBP	3.15	□□□□□ -1.91
VMA6	YLR447C	HSP32	Q08992	237 aa		3.15	□□□□□ -1.91
VMA6	YLR447C	ERV2	Q12284	196 aa		3.15	□□□□□ -1.91
VMA6	YLR447C	SOD1	P00445	154 aa	Known RBP	3.14	□□□□□ -1.91
VMA6	YLR447C	GCN4	P03069	281 aa		3.14	□□□□□ -1.91
VMA6	YLR447C	CKA1	P15790	372 aa		3.14	□□□□□ -1.91
VMA6	YLR447C	PDX1	P16451	410 aa		3.14	□□□□□ -1.91
VMA6	YLR447C	HEM15	P16622	393 aa		3.14	□□□□□ -1.91
VMA6	YLR447C	OLE1	P21147	510 aa	Known RBP	3.14	□□□□□ -1.91
VMA6	YLR447C	RNA14	P25298	677 aa	Known RBP	3.14	□□□□□ -1.91
VMA6	YLR447C	DPH2	P32461	534 aa		3.14	□□□□□ -1.91
VMA6	YLR447C	SPR1	P32603	445 aa		3.14	□□□□□ -1.91
VMA6	YLR447C	RXT2	P38255	430 aa		3.14	□□□□□ -1.91
VMA6	YLR447C	UTP9	P38882	575 aa	Known RBP	3.14	□□□□□ -1.91
VMA6	YLR447C	CIN4	P39110	191 aa		3.14	□□□□□ -1.91
VMA6	YLR447C	YIL067C	P40514	678 aa		3.14	□□□□□ -1.91
VMA6	YLR447C	RMD8	P43620	662 aa		3.14	□□□□□ -1.91
VMA6	YLR447C	BSC5	P53755	489 aa		3.14	□□□□□ -1.91
VMA6	YLR447C	PRP3	Q03338	469 aa	Predicted RBP	3.14	□□□□□ -1.91
VMA6	YLR447C	YDR286C	Q05530	114 aa		3.14	□□□□□ -1.91
VMA6	YLR447C	ESA1	Q08649	445 aa		3.14	□□□□□ -1.91
VMA6	YLR447C	HRT3	Q12347	344 aa		3.14	□□□□□ -1.91
VMA6	YLR447C	SKM1	Q12469	655 aa		3.14	□□□□□ -1.91
VMA6	YLR447C	TY1B-A	O13527	1196 aa	Known RBP	3.13	□□□□□ -1.91
VMA6	YLR447C	HIP1	P06775	603 aa		3.13	□□□□□ -1.91
VMA6	YLR447C	KGD1	P20967	1014 aa	Known RBP	3.13	□□□□□ -1.91
VMA6	YLR447C	ISY1	P21374	235 aa	Predicted RBP	3.13	□□□□□ -1.91
VMA6	YLR447C	ERG3	P32353	365 aa		3.13	□□□□□ -1.91
VMA6	YLR447C	YBR144C	P34215	104 aa		3.13	□□□□□ -1.91
VMA6	YLR447C	MAL33	P38157	468 aa		3.13	□□□□□ -1.91
VMA6	YLR447C	POP2	P39008	433 aa		3.13	□□□□□ -1.91
VMA6	YLR447C	MEP1	P40260	492 aa		3.13	□□□□□ -1.91
VMA6	YLR447C	ARE2	P53629	642 aa	Known RBP	3.13	□□□□□ -1.91
VMA6	YLR447C	RPT6	Q01939	405 aa	Known RBP	3.13	□□□□□ -1.91
VMA6	YLR447C	PIR3	Q03180	325 aa		3.13	□□□□□ -1.91
VMA6	YLR447C	RMT2	Q03305	412 aa		3.13	□□□□□ -1.91
VMA6	YLR447C	YMR155W	Q03795	547 aa		3.13	□□□□□ -1.91
VMA6	YLR447C	BUD22	Q04347	519 aa	Known RBP	3.13	□□□□□ -1.91
VMA6	YLR447C	YDR341C	Q05506	607 aa	Known RBP	3.13	□□□□□ -1.91
VMA6	YLR447C	PHO92	Q06390	306 aa		3.13	□□□□□ -1.91
VMA6	YLR447C	YOR365C	Q08844	703 aa		3.13	□□□□□ -1.91
VMA6	YLR447C	PGC1	Q08959	321 aa		3.13	□□□□□ -1.91
VMA6	YLR447C	TMS1	Q12116	473 aa		3.13	□□□□□ -1.91
VMA6	YLR447C	ISA2	Q12425	185 aa		3.13	□□□□□ -1.91
VMA6	YLR447C	PGA3	Q12746	312 aa	Known RBP	3.13	□□□□□ -1.91
VMA6	YLR447C	MF(ALPHA)1	P01149	165 aa		3.12	□□□□□ -1.91
VMA6	YLR447C	ARG3	P05150	338 aa		3.12	□□□□□ -1.91
VMA6	YLR447C	MET17	P06106	444 aa		3.12	□□□□□ -1.91
VMA6	YLR447C	RAD52	P06778	471 aa	Known RBP	3.12	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 41.5 ms