RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK1	YLR006C	KAP104	P38217	918 aa	Known RBP	5.69	□□□□□ -1.5
SSK1	YLR006C	RRN7	P40992	514 aa		5.69	□□□□□ -1.5
SSK1	YLR006C	SSN8	P47821	323 aa		5.69	□□□□□ -1.5
SSK1	YLR006C	MRK1	P50873	501 aa		5.69	□□□□□ -1.5
SSK1	YLR006C	YNL134C	P53912	376 aa	Known RBP	5.69	□□□□□ -1.5
SSK1	YLR006C	SFB2	P53953	876 aa		5.69	□□□□□ -1.5
SSK1	YLR006C	EFR3	Q03653	782 aa	Known RBP	5.69	□□□□□ -1.5
SSK1	YLR006C	DCS1	Q06151	350 aa		5.69	□□□□□ -1.5
SSK1	YLR006C	ATG17	Q06410	417 aa		5.69	□□□□□ -1.5
SSK1	YLR006C	SNA4	Q07549	140 aa		5.69	□□□□□ -1.5
SSK1	YLR006C	UBX3	Q12229	455 aa		5.69	□□□□□ -1.5
SSK1	YLR006C	RPL1A	P0CX43	217 aa	Known RBP	5.68	□□□□□ -1.5
SSK1	YLR006C	RPL1B	P0CX44	217 aa	Known RBP	5.68	□□□□□ -1.5
SSK1	YLR006C	FUS1	P11710	512 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	VPH2	P32341	215 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	SEC66	P33754	206 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	YER085C	P40058	173 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	MAF1	P41910	395 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	OTU1	P43558	301 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	YFL040W	P43562	540 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	MPS3	P47069	682 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	EFM3	P47163	339 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	OGG1	P53397	376 aa	Predicted RBP	5.68	□□□□□ -1.5
SSK1	YLR006C	RCF2	P53721	224 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	MUK1	Q02866	612 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	YMR321C	Q04898	105 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	RBS1	Q05672	457 aa	Known RBP	5.68	□□□□□ -1.5
SSK1	YLR006C	ASA1	Q06822	443 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	TPO1	Q07824	586 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	XYL2	Q07993	356 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	DNL4	Q08387	944 aa	Predicted RBP	5.68	□□□□□ -1.5
SSK1	YLR006C	MDM20	Q12387	796 aa	Known RBP	5.68	□□□□□ -1.5
SSK1	YLR006C	RGS2	Q99188	309 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	YPR089W	O13585	888 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	INO1	P11986	533 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	BOS1	P25385	244 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	GID7	P25569	745 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	ARO4	P32449	370 aa	Known RBP	5.68	□□□□□ -1.5
SSK1	YLR006C	PHA2	P32452	334 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	BZZ1	P38822	633 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	SEC31	P38968	1273 aa	Known RBP	5.68	□□□□□ -1.5
SSK1	YLR006C	DSE1	P40077	573 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	SNX4	P47057	423 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	APS3	P47064	194 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	VMA10	P48836	114 aa	Known RBP	5.68	□□□□□ -1.5
SSK1	YLR006C	YGL117W	P53133	265 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	YGR283C	P53336	341 aa	Predicted RBP	5.68	□□□□□ -1.5
SSK1	YLR006C	SLT2	Q00772	484 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	YSA1	Q01976	231 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	CLU1	Q03690	1277 aa	Known RBP	5.68	□□□□□ -1.5
SSK1	YLR006C	FAR10	Q06001	478 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	LUC7	Q07508	261 aa	Predicted RBP	5.68	□□□□□ -1.5
SSK1	YLR006C	TIF6	Q12522	245 aa	Known RBP	5.68	□□□□□ -1.5
SSK1	YLR006C	IZH4	Q99393	312 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	AI5_ALPHA	Q9ZZX1	630 aa		5.68	□□□□□ -1.5
SSK1	YLR006C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	5.67	□□□□□ -1.5	not detected
SSK1	YLR006C	AMS1	P22855	1083 aa		5.67	□□□□□ -1.5
SSK1	YLR006C	CPR2	P23285	205 aa		5.67	□□□□□ -1.5
SSK1	YLR006C	SAT4	P25333	603 aa	Known RBP	5.67	□□□□□ -1.5
SSK1	YLR006C	YCL068C	P25593	260 aa		5.67	□□□□□ -1.5
SSK1	YLR006C	YCR016W	P25617	290 aa	Known RBP	5.67	□□□□□ -1.5
SSK1	YLR006C	CCR4	P31384	837 aa	Known RBP	5.67	□□□□□ -1.5
SSK1	YLR006C	LHS1	P36016	881 aa		5.67	□□□□□ -1.5
SSK1	YLR006C	GLG1	P36143	616 aa		5.67	□□□□□ -1.5
SSK1	YLR006C	MRPL37	P36532	105 aa		5.67	□□□□□ -1.5
SSK1	YLR006C	YMR262W	P38430	313 aa		5.67	□□□□□ -1.5
SSK1	YLR006C	NPT1	P39683	429 aa	Known RBP	5.67	□□□□□ -1.5
SSK1	YLR006C	GPB2	P39717	880 aa		5.67	□□□□□ -1.5
SSK1	YLR006C	ZRG8	P40021	1076 aa		5.67	□□□□□ -1.5
SSK1	YLR006C	HPM1	P40481	377 aa		5.67	□□□□□ -1.5
SSK1	YLR006C	ERG10	P41338	398 aa	Known RBP	5.67	□□□□□ -1.5
SSK1	YLR006C	ULI1	P43604	169 aa		5.67	□□□□□ -1.5
SSK1	YLR006C	ARC1	P46672	376 aa	Known RBP	5.67	□□□□□ -1.5
SSK1	YLR006C	YJR054W	P47114	497 aa		5.67	□□□□□ -1.5
SSK1	YLR006C	DAN4	P47179	1161 aa		5.67	□□□□□ -1.5
SSK1	YLR006C	NMA2	P53204	395 aa		5.67	□□□□□ -1.5
SSK1	YLR006C	ASI2	P53895	289 aa		5.67	□□□□□ -1.5
SSK1	YLR006C	MZM1	Q03429	123 aa	Predicted RBP	5.67	□□□□□ -1.5
SSK1	YLR006C	DOT1	Q04089	582 aa	Known RBP	5.67	□□□□□ -1.5
SSK1	YLR006C	MRPL1	Q04599	285 aa		5.67	□□□□□ -1.5
SSK1	YLR006C	YLR173W	Q06247	608 aa		5.67	□□□□□ -1.5
SSK1	YLR006C	NSE1	Q07913	336 aa		5.67	□□□□□ -1.5
SSK1	YLR006C	THI20	Q08224	551 aa		5.67	□□□□□ -1.5
SSK1	YLR006C	MCH5	Q08777	521 aa		5.67	□□□□□ -1.5
SSK1	YLR006C	STE12	P13574	688 aa		5.66	□□□□□ -1.5
SSK1	YLR006C	LRE1	P25579	583 aa	Known RBP	5.66	□□□□□ -1.5
SSK1	YLR006C	YCR061W	P25639	631 aa		5.66	□□□□□ -1.5
SSK1	YLR006C	UTR2	P32623	467 aa		5.66	□□□□□ -1.5
SSK1	YLR006C	SRO77	P38163	1010 aa		5.66	□□□□□ -1.5
SSK1	YLR006C	YER137C	P40083	148 aa	Known RBP	5.66	□□□□□ -1.5
SSK1	YLR006C	SAD1	P43589	448 aa		5.66	□□□□□ -1.5
SSK1	YLR006C	NET1	P47035	1189 aa		5.66	□□□□□ -1.5
SSK1	YLR006C	YTP1	P53584	459 aa		5.66	□□□□□ -1.5
SSK1	YLR006C	MPP6	P53725	186 aa	Predicted RBP	5.66	□□□□□ -1.5
SSK1	YLR006C	SKI8	Q02793	397 aa	Predicted RBP	5.66	□□□□□ -1.5
SSK1	YLR006C	SNU56	Q03782	492 aa	Known RBP	5.66	□□□□□ -1.5
SSK1	YLR006C	TIF35	Q04067	274 aa	Known RBP	5.66	□□□□□ -1.5
SSK1	YLR006C	ISR1	Q06098	443 aa	Known RBP	5.66	□□□□□ -1.5
SSK1	YLR006C	CDD1	Q06549	142 aa		5.66	□□□□□ -1.5
SSK1	YLR006C	DIS3	Q08162	1001 aa	Known RBP	5.66	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 44.7 ms