RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 PNMA2Q9UL42 364 aa17.12■□□□□ 0.33
SRRT-219ENST00000641476 PCDHA11Q9Y5I1 949 aa17.12■□□□□ 0.33
SRRT-219ENST00000641476 LOC102724159A0A0B4J2E5 919 aa17.11■□□□□ 0.33
SRRT-219ENST00000641476 RFXAPO00287 272 aa17.11■□□□□ 0.33
SRRT-219ENST00000641476 ATP2A2P16615 1042 aaKnown RBP17.11■□□□□ 0.33
SRRT-219ENST00000641476 ITGA7Q13683 1181 aa17.11■□□□□ 0.33
SRRT-219ENST00000641476 PWP2Q15269 919 aaKnown RBP17.11■□□□□ 0.33
SRRT-219ENST00000641476 TMEM63BQ5T3F8 832 aa17.11■□□□□ 0.33
SRRT-219ENST00000641476 ENAHQ8N8S7 591 aaPredicted RBP17.11■□□□□ 0.33
SRRT-219ENST00000641476 NOC4LQ9BVI4 516 aaKnown RBP17.11■□□□□ 0.33
SRRT-219ENST00000641476 TRPV6Q9H1D0 765 aa17.11■□□□□ 0.33
SRRT-219ENST00000641476 CERS4Q9HA82 394 aa17.11■□□□□ 0.33
SRRT-219ENST00000641476 TNKSO95271 1327 aa17.11■□□□□ 0.33
SRRT-219ENST00000641476 RAD50Q92878 1312 aa17.11■□□□□ 0.33
SRRT-219ENST00000641476 GTPBP6O43824 516 aaPredicted RBP17.1■□□□□ 0.33
SRRT-219ENST00000641476 B4GALT4O60513 344 aa17.1■□□□□ 0.33
SRRT-219ENST00000641476 CALML3P27482 149 aa17.1■□□□□ 0.33
SRRT-219ENST00000641476 USH1GQ495M9 461 aa17.1■□□□□ 0.33
SRRT-219ENST00000641476 CCDC178Q5BJE1 867 aa17.1■□□□□ 0.33
SRRT-219ENST00000641476 TMEM31Q5JXX7 168 aa17.1■□□□□ 0.33
SRRT-219ENST00000641476 IQSEC1Q6DN90 963 aa17.1■□□□□ 0.33
SRRT-219ENST00000641476 RNF207Q6ZRF8 634 aa17.1■□□□□ 0.33
SRRT-219ENST00000641476 SLC43A3Q8NBI5 491 aa17.1■□□□□ 0.33
SRRT-219ENST00000641476 SCLYQ96I15 445 aa17.1■□□□□ 0.33
SRRT-219ENST00000641476 ZSCAN10Q96SZ4 725 aaPredicted RBP17.1■□□□□ 0.33
SRRT-219ENST00000641476 AP5M1Q9H0R1 490 aa17.1■□□□□ 0.33
SRRT-219ENST00000641476 KAT14Q9H8E8 782 aa17.1■□□□□ 0.33
SRRT-219ENST00000641476 CTNNA3Q9UI47 895 aa17.1■□□□□ 0.33
SRRT-219ENST00000641476 REV3LO60673 3130 aa17.1■□□□□ 0.33
SRRT-219ENST00000641476 DYNC1LI2O43237 492 aaPredicted RBP17.09■□□□□ 0.33
SRRT-219ENST00000641476 CA3P07451 260 aa17.09■□□□□ 0.33
SRRT-219ENST00000641476 RPS6P62753 249 aaKnown RBP17.09■□□□□ 0.33
SRRT-219ENST00000641476 CDC37Q16543 378 aaPredicted RBP17.09■□□□□ 0.33
SRRT-219ENST00000641476 ASPRV1Q53RT3 343 aa17.09■□□□□ 0.33
SRRT-219ENST00000641476 KIAA1211Q6ZU35 1233 aa17.09■□□□□ 0.33
SRRT-219ENST00000641476 ANKS1AQ92625 1134 aa17.09■□□□□ 0.33
SRRT-219ENST00000641476 UBA5Q9GZZ9 404 aa17.09■□□□□ 0.33
SRRT-219ENST00000641476 CNNM2Q9H8M5 875 aa17.09■□□□□ 0.33
SRRT-219ENST00000641476 Q9Y3F1 56 aa17.09■□□□□ 0.33
SRRT-219ENST00000641476 ARIH1Q9Y4X5 557 aaPredicted RBP17.09■□□□□ 0.33
SRRT-219ENST00000641476 MTCH2Q9Y6C9 303 aa17.09■□□□□ 0.33
SRRT-219ENST00000641476 GRIN2DO15399 1336 aa17.08■□□□□ 0.32
SRRT-219ENST00000641476 ZEB2O60315 1214 aa17.08■□□□□ 0.32
SRRT-219ENST00000641476 CABYRO75952 493 aa17.08■□□□□ 0.32
SRRT-219ENST00000641476 EDNRBP24530 442 aa17.08■□□□□ 0.32
SRRT-219ENST00000641476 PSMC6P62333 389 aa17.08■□□□□ 0.32
SRRT-219ENST00000641476 IRX6P78412 446 aaPredicted RBP17.08■□□□□ 0.32
SRRT-219ENST00000641476 DUSP28Q4G0W2 176 aa17.08■□□□□ 0.32
SRRT-219ENST00000641476 KRT40Q6A162 431 aa17.08■□□□□ 0.32
SRRT-219ENST00000641476 RPUSD2Q8IZ73 545 aaKnown RBP17.08■□□□□ 0.32
SRRT-219ENST00000641476 UBAC1Q9BSL1 405 aa17.08■□□□□ 0.32
SRRT-219ENST00000641476 KRT23Q9C075 422 aa17.08■□□□□ 0.32
SRRT-219ENST00000641476 ZSWIM5Q9P217 1185 aa17.08■□□□□ 0.32
SRRT-219ENST00000641476 TCF20Q9UGU0 1960 aaKnown RBP17.08■□□□□ 0.32
SRRT-219ENST00000641476 MYO9BQ13459 2157 aa17.07■□□□□ 0.32
SRRT-219ENST00000641476 PDE4DQ08499 809 aa17.07■□□□□ 0.32
SRRT-219ENST00000641476 TTLL4Q14679 1199 aa17.07■□□□□ 0.32
SRRT-219ENST00000641476 TMEM67Q5HYA8 995 aa17.07■□□□□ 0.32
SRRT-219ENST00000641476 WDR11Q9BZH6 1224 aa17.07■□□□□ 0.32
SRRT-219ENST00000641476 SCN10AQ9Y5Y9 1956 aa17.06■□□□□ 0.32
SRRT-219ENST00000641476 ABCB11O95342 1321 aa17.06■□□□□ 0.32
SRRT-219ENST00000641476 RBM47A0AV96 593 aaKnown RBP17.06■□□□□ 0.32
SRRT-219ENST00000641476 FAM86C2PA6NEL3 165 aa17.06■□□□□ 0.32
SRRT-219ENST00000641476 EPOPA6NHQ4 379 aa17.06■□□□□ 0.32
SRRT-219ENST00000641476 PARP1P09874 1014 aaKnown RBP17.06■□□□□ 0.32
SRRT-219ENST00000641476 PPP2R5BQ15173 497 aa17.06■□□□□ 0.32
SRRT-219ENST00000641476 ADGRF4Q8IZF3 695 aa17.06■□□□□ 0.32
SRRT-219ENST00000641476 DNERQ8NFT8 737 aa17.06■□□□□ 0.32
SRRT-219ENST00000641476 VWCEQ96DN2 955 aa17.06■□□□□ 0.32
SRRT-219ENST00000641476 MPHOSPH6Q99547 160 aaKnown RBP17.06■□□□□ 0.32
SRRT-219ENST00000641476 COG5Q9UP83 839 aa17.06■□□□□ 0.32
SRRT-219ENST00000641476 TLL1O43897 1013 aa17.05■□□□□ 0.32
SRRT-219ENST00000641476 QRICH1Q2TAL8 776 aa17.05■□□□□ 0.32
SRRT-219ENST00000641476 IFIT1BQ5T764 474 aaKnown RBP17.05■□□□□ 0.32
SRRT-219ENST00000641476 DEFB128Q7Z7B8 93 aa17.05■□□□□ 0.32
SRRT-219ENST00000641476 OR6J1Q8NGC5 347 aa17.05■□□□□ 0.32
SRRT-219ENST00000641476 ARNTL2Q8WYA1 636 aa17.05■□□□□ 0.32
SRRT-219ENST00000641476 HLA-CQ95604 372 aa17.05■□□□□ 0.32
SRRT-219ENST00000641476 GBF1Q92538 1859 aa17.05■□□□□ 0.32
SRRT-219ENST00000641476 TANC1Q9C0D5 1861 aa17.05■□□□□ 0.32
SRRT-219ENST00000641476 KIAA1217Q5T5P2 1943 aa17.04■□□□□ 0.32
SRRT-219ENST00000641476 DHX16O60231 1041 aaKnown RBP17.04■□□□□ 0.32
SRRT-219ENST00000641476 POU3F3P20264 500 aaPredicted RBP17.04■□□□□ 0.32
SRRT-219ENST00000641476 CPT1AP50416 773 aa17.04■□□□□ 0.32
SRRT-219ENST00000641476 SEC23AQ15436 765 aa17.04■□□□□ 0.32
SRRT-219ENST00000641476 CYB5R4Q7L1T6 521 aa17.04■□□□□ 0.32
SRRT-219ENST00000641476 RGS22Q8NE09 1264 aa17.04■□□□□ 0.32
SRRT-219ENST00000641476 SCFD2Q8WU76 684 aa17.04■□□□□ 0.32
SRRT-219ENST00000641476 KHSRPQ92945 711 aaKnown RBP eCLIP17.04■□□□□ 0.32
SRRT-219ENST00000641476 SEZ6LQ9BYH1 1024 aa17.04■□□□□ 0.32
SRRT-219ENST00000641476 ALDH8A1Q9H2A2 487 aaPredicted RBP17.04■□□□□ 0.32
SRRT-219ENST00000641476 C11orf16Q9NQ32 467 aa17.04■□□□□ 0.32
SRRT-219ENST00000641476 TRMT13Q9NUP7 481 aaKnown RBP17.04■□□□□ 0.32
SRRT-219ENST00000641476 PFKMP08237 780 aa17.03■□□□□ 0.32
SRRT-219ENST00000641476 CYP2C9P11712 490 aa17.03■□□□□ 0.32
SRRT-219ENST00000641476 CHMLP26374 656 aa17.03■□□□□ 0.32
SRRT-219ENST00000641476 PURAQ00577 322 aaKnown RBP17.03■□□□□ 0.32
SRRT-219ENST00000641476 PTH1RQ03431 593 aa17.03■□□□□ 0.32
SRRT-219ENST00000641476 RUFY2Q8WXA3 655 aa17.03■□□□□ 0.32
SRRT-219ENST00000641476 JMJD4Q9H9V9 463 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms