RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 TTLL4Q14679 1199 aa23.4■■□□□ 1.34
CLN6-222ENST00000637667 PSRC1Q6PGN9 363 aaPredicted RBP23.4■■□□□ 1.34
CLN6-222ENST00000637667 NSUN6Q8TEA1 469 aaKnown RBP23.4■■□□□ 1.34
CLN6-222ENST00000637667 COPS5Q92905 334 aa23.4■■□□□ 1.34
CLN6-222ENST00000637667 TAAR1Q96RJ0 339 aa23.4■■□□□ 1.34
CLN6-222ENST00000637667 MTG1Q9BT17 334 aaPredicted RBP23.4■■□□□ 1.34
CLN6-222ENST00000637667 NOC4LQ9BVI4 516 aaKnown RBP23.4■■□□□ 1.34
CLN6-222ENST00000637667 ALDH8A1Q9H2A2 487 aaPredicted RBP23.4■■□□□ 1.34
CLN6-222ENST00000637667 GPHNQ9NQX3 736 aaPredicted RBP23.4■■□□□ 1.34
CLN6-222ENST00000637667 UMODL1Q5DID0 1318 aa23.39■■□□□ 1.34
CLN6-222ENST00000637667 TMEM265A0A087WTH1 108 aa23.39■■□□□ 1.33
CLN6-222ENST00000637667 ZNF365Q70YC5 407 aa23.39■■□□□ 1.33
CLN6-222ENST00000637667 RMDN3Q96TC7 470 aa23.39■■□□□ 1.33
CLN6-222ENST00000637667 AMNQ9BXJ7 453 aa23.39■■□□□ 1.33
CLN6-222ENST00000637667 IL23AQ9NPF7 189 aa23.39■■□□□ 1.33
CLN6-222ENST00000637667 MAD2L2Q9UI95 211 aa23.39■■□□□ 1.33
CLN6-222ENST00000637667 PALM3A6NDB9 673 aaPredicted RBP23.38■■□□□ 1.33
CLN6-222ENST00000637667 A6NJR5 290 aa23.38■■□□□ 1.33
CLN6-222ENST00000637667 IFIT3O14879 490 aaKnown RBP23.38■■□□□ 1.33
CLN6-222ENST00000637667 ARIH2O95376 493 aa23.38■■□□□ 1.33
CLN6-222ENST00000637667 RASIP1Q5U651 963 aa23.38■■□□□ 1.33
CLN6-222ENST00000637667 CCDC62Q6P9F0 684 aa23.38■■□□□ 1.33
CLN6-222ENST00000637667 RALYLQ86SE5 291 aaKnown RBP23.38■■□□□ 1.33
CLN6-222ENST00000637667 MTMR8Q96EF0 704 aa23.38■■□□□ 1.33
CLN6-222ENST00000637667 IWS1Q96ST2 819 aa23.38■■□□□ 1.33
CLN6-222ENST00000637667 TAF6LQ9Y6J9 622 aa23.38■■□□□ 1.33
CLN6-222ENST00000637667 KPNA6O60684 536 aa23.37■■□□□ 1.33
CLN6-222ENST00000637667 DNAJB2P25686 324 aa23.37■■□□□ 1.33
CLN6-222ENST00000637667 TRMT13Q9NUP7 481 aaKnown RBP23.37■■□□□ 1.33
CLN6-222ENST00000637667 ERICH2A1L162 156 aa23.36■■□□□ 1.33
CLN6-222ENST00000637667 E7EWF7 191 aa23.36■■□□□ 1.33
CLN6-222ENST00000637667 ZBTB5O15062 677 aa23.36■■□□□ 1.33
CLN6-222ENST00000637667 PPP1R11O60927 126 aaPredicted RBP23.36■■□□□ 1.33
CLN6-222ENST00000637667 CFBP00751 764 aa23.36■■□□□ 1.33
CLN6-222ENST00000637667 SUPT20HL2P0C7V6 817 aa23.36■■□□□ 1.33
CLN6-222ENST00000637667 CCL23P55773 120 aa23.36■■□□□ 1.33
CLN6-222ENST00000637667 GRM4Q14833 912 aa23.36■■□□□ 1.33
CLN6-222ENST00000637667 STXBP2Q15833 593 aa23.36■■□□□ 1.33
CLN6-222ENST00000637667 ARHGEF16Q5VV41 709 aa23.36■■□□□ 1.33
CLN6-222ENST00000637667 SEPT14Q6ZU15 432 aa23.36■■□□□ 1.33
CLN6-222ENST00000637667 NCOA7Q8NI08 942 aa23.36■■□□□ 1.33
CLN6-222ENST00000637667 WNT8AQ9H1J5 351 aa23.36■■□□□ 1.33
CLN6-222ENST00000637667 OPLAHO14841 1288 aa23.35■■□□□ 1.33
CLN6-222ENST00000637667 EIF2AK2P19525 551 aaKnown RBP23.35■■□□□ 1.33
CLN6-222ENST00000637667 WTAPQ15007 396 aa23.35■■□□□ 1.33
CLN6-222ENST00000637667 SART3Q15020 963 aaKnown RBP23.35■■□□□ 1.33
CLN6-222ENST00000637667 SLC35G1Q2M3R5 365 aa23.35■■□□□ 1.33
CLN6-222ENST00000637667 NBPF20Q3BBV1 942 aa23.35■■□□□ 1.33
CLN6-222ENST00000637667 STOX1Q6ZVD7 989 aa23.35■■□□□ 1.33
CLN6-222ENST00000637667 MYLIPQ8WY64 445 aa23.35■■□□□ 1.33
CLN6-222ENST00000637667 HERVK_113Q902F9 699 aa23.35■■□□□ 1.33
CLN6-222ENST00000637667 MAP4K1Q92918 833 aa23.35■■□□□ 1.33
CLN6-222ENST00000637667 SENP2Q9HC62 589 aa23.35■■□□□ 1.33
CLN6-222ENST00000637667 PCDHA1Q9Y5I3 950 aa23.35■■□□□ 1.33
CLN6-222ENST00000637667 CYP2C9P11712 490 aa23.34■■□□□ 1.33
CLN6-222ENST00000637667 HSD17B4P51659 736 aa23.34■■□□□ 1.33
CLN6-222ENST00000637667 GHRHRQ02643 423 aa23.34■■□□□ 1.33
CLN6-222ENST00000637667 AFG1LQ8WV93 481 aa23.34■■□□□ 1.33
CLN6-222ENST00000637667 TIFAQ96CG3 184 aa23.34■■□□□ 1.33
CLN6-222ENST00000637667 PXMP2Q9NR77 195 aa23.34■■□□□ 1.33
CLN6-222ENST00000637667 SCN10AQ9Y5Y9 1956 aa23.34■■□□□ 1.33
CLN6-222ENST00000637667 GRXCR1A8MXD5 290 aa23.33■■□□□ 1.33
CLN6-222ENST00000637667 EIF3JO75822 258 aaKnown RBP23.33■■□□□ 1.33
CLN6-222ENST00000637667 GH1P01241 217 aa23.33■■□□□ 1.33
CLN6-222ENST00000637667 FGBP02675 491 aa23.33■■□□□ 1.33
CLN6-222ENST00000637667 NR3C2P08235 984 aa23.33■■□□□ 1.33
CLN6-222ENST00000637667 ARHGAP1Q07960 439 aa23.33■■□□□ 1.33
CLN6-222ENST00000637667 TROAPQ12815 778 aa23.33■■□□□ 1.33
CLN6-222ENST00000637667 LY6KQ17RY6 165 aa23.33■■□□□ 1.33
CLN6-222ENST00000637667 FAM47CQ5HY64 1035 aa23.33■■□□□ 1.33
CLN6-222ENST00000637667 TMEM67Q5HYA8 995 aa23.33■■□□□ 1.33
CLN6-222ENST00000637667 NFRKBQ6P4R8 1299 aa23.33■■□□□ 1.33
CLN6-222ENST00000637667 CHST3Q7LGC8 479 aa23.33■■□□□ 1.33
CLN6-222ENST00000637667 HOMER1Q86YM7 354 aa23.33■■□□□ 1.33
CLN6-222ENST00000637667 MTIF3Q9H2K0 278 aaKnown RBP23.33■■□□□ 1.33
CLN6-222ENST00000637667 RIOX1Q9H6W3 641 aa23.33■■□□□ 1.33
CLN6-222ENST00000637667 RBM8AQ9Y5S9 174 aaKnown RBP23.33■■□□□ 1.33
CLN6-222ENST00000637667 ANTXR2P58335 489 aa23.32■■□□□ 1.32
CLN6-222ENST00000637667 MB21D2Q8IYB1 491 aaPredicted RBP23.32■■□□□ 1.32
CLN6-222ENST00000637667 RPUSD2Q8IZ73 545 aaKnown RBP23.32■■□□□ 1.32
CLN6-222ENST00000637667 PPP1R13LQ8WUF5 828 aa23.32■■□□□ 1.32
CLN6-222ENST00000637667 PIGSQ96S52 555 aa23.32■■□□□ 1.32
CLN6-222ENST00000637667 MAP3K20Q9NYL2 800 aaKnown RBP23.32■■□□□ 1.32
CLN6-222ENST00000637667 CXXC1Q9P0U4 656 aaPredicted RBP23.32■■□□□ 1.32
CLN6-222ENST00000637667 MMP3P08254 477 aa23.31■■□□□ 1.32
CLN6-222ENST00000637667 PTPN11Q06124 597 aaPredicted RBP23.31■■□□□ 1.32
CLN6-222ENST00000637667 TRAF1Q13077 416 aa23.31■■□□□ 1.32
CLN6-222ENST00000637667 CATIPQ7Z7H3 387 aa23.31■■□□□ 1.32
CLN6-222ENST00000637667 SAMD3Q8N6K7 520 aa23.31■■□□□ 1.32
CLN6-222ENST00000637667 MAFAQ8NHW3 353 aaPredicted RBP23.31■■□□□ 1.32
CLN6-222ENST00000637667 SCLYQ96I15 445 aa23.31■■□□□ 1.32
CLN6-222ENST00000637667 PBX4Q9BYU1 374 aa23.31■■□□□ 1.32
CLN6-222ENST00000637667 MYH6P13533 1939 aa23.31■■□□□ 1.32
CLN6-222ENST00000637667 BAZ2BQ9UIF8 2168 aaKnown RBP23.31■■□□□ 1.32
CLN6-222ENST00000637667 CYTH3O43739 400 aa23.3■■□□□ 1.32
CLN6-222ENST00000637667 FOSL2P15408 326 aa23.3■■□□□ 1.32
CLN6-222ENST00000637667 HOXA13P31271 388 aaPredicted RBP23.3■■□□□ 1.32
CLN6-222ENST00000637667 PBX2P40425 430 aa23.3■■□□□ 1.32
CLN6-222ENST00000637667 GRIN2CQ14957 1233 aa23.3■■□□□ 1.32
CLN6-222ENST00000637667 OTOP2Q7RTS6 562 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms