RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 NLRP12P59046 1061 aa10.71□□□□□ -0.69
CLTCL1-211ENST00000621271 MYO1EQ12965 1108 aa10.71□□□□□ -0.69
CLTCL1-211ENST00000621271 CPLX4Q7Z7G2 160 aa10.71□□□□□ -0.69
CLTCL1-211ENST00000621271 GJA10Q969M2 543 aa10.71□□□□□ -0.69
CLTCL1-211ENST00000621271 OTUD5Q96G74 571 aa10.71□□□□□ -0.69
CLTCL1-211ENST00000621271 GH2P01242 217 aa10.71□□□□□ -0.69
CLTCL1-211ENST00000621271 BPIFB4P59827 614 aa10.71□□□□□ -0.69
CLTCL1-211ENST00000621271 ELMOD1Q8N336 334 aa10.71□□□□□ -0.69
CLTCL1-211ENST00000621271 ATP2A3Q93084 1043 aa10.71□□□□□ -0.69
CLTCL1-211ENST00000621271 TRIM31Q9BZY9 425 aa10.71□□□□□ -0.69
CLTCL1-211ENST00000621271 SPATA31A6Q5VVP1 1343 aa10.71□□□□□ -0.69
CLTCL1-211ENST00000621271 IFNB1P01574 187 aa10.71□□□□□ -0.69
CLTCL1-211ENST00000621271 FANCCQ00597 558 aa10.71□□□□□ -0.69
CLTCL1-211ENST00000621271 ADAM9Q13443 819 aa10.71□□□□□ -0.69
CLTCL1-211ENST00000621271 CATSPER4Q7RTX7 472 aa10.71□□□□□ -0.69
CLTCL1-211ENST00000621271 TMTC1Q8IUR5 882 aa10.71□□□□□ -0.69
CLTCL1-211ENST00000621271 PPP1R16BQ96T49 567 aa10.71□□□□□ -0.69
CLTCL1-211ENST00000621271 MADDQ8WXG6 1647 aa10.71□□□□□ -0.7
CLTCL1-211ENST00000621271 DPYSL4O14531 572 aa10.71□□□□□ -0.7
CLTCL1-211ENST00000621271 TUBB2AQ13885 445 aa10.71□□□□□ -0.7
CLTCL1-211ENST00000621271 RPS6KA1Q15418 735 aa10.71□□□□□ -0.7
CLTCL1-211ENST00000621271 NOP9Q86U38 636 aaKnown RBP10.71□□□□□ -0.7
CLTCL1-211ENST00000621271 TUBB2BQ9BVA1 445 aa10.71□□□□□ -0.7
CLTCL1-211ENST00000621271 SAMD15Q9P1V8 674 aa10.71□□□□□ -0.7
CLTCL1-211ENST00000621271 CDC42BPBQ9Y5S2 1711 aa10.71□□□□□ -0.7
CLTCL1-211ENST00000621271 NSFP46459 744 aaKnown RBP10.71□□□□□ -0.7
CLTCL1-211ENST00000621271 TFAMQ00059 246 aaKnown RBP10.71□□□□□ -0.7
CLTCL1-211ENST00000621271 PTK2Q05397 1052 aa10.71□□□□□ -0.7
CLTCL1-211ENST00000621271 DSTYKQ6XUX3 929 aa10.71□□□□□ -0.7
CLTCL1-211ENST00000621271 MAP7D3Q8IWC1 876 aa10.71□□□□□ -0.7
CLTCL1-211ENST00000621271 TSC1Q92574 1164 aa10.71□□□□□ -0.7
CLTCL1-211ENST00000621271 ARHGEF1Q92888 912 aaKnown RBP10.71□□□□□ -0.7
CLTCL1-211ENST00000621271 PIGSQ96S52 555 aa10.71□□□□□ -0.7
CLTCL1-211ENST00000621271 TDRD3Q9H7E2 651 aaKnown RBP10.71□□□□□ -0.7
CLTCL1-211ENST00000621271 IPO11Q9UI26 975 aaKnown RBP10.71□□□□□ -0.7
CLTCL1-211ENST00000621271 TNPO2O14787 897 aaKnown RBP10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 ABCB4P21439 1286 aa10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 MECOMQ03112 1051 aa10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 FYB2Q5VWT5 728 aa10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 GPT2Q8TD30 523 aa10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 PPP2R3CQ969Q6 453 aa10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 NAPGQ99747 312 aaPredicted RBP10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 LBHD1Q9BQE6 289 aaPredicted RBP10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 PRDM5Q9NQX1 630 aaPredicted RBP10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 CAMSAP1Q5T5Y3 1602 aa10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 PLA2R1Q13018 1463 aa10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 LAD1O00515 517 aa10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 GAP43P17677 238 aa10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 MARK3P27448 753 aa10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 LONP1P36776 959 aaKnown RBP10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 TRMT2AQ8IZ69 625 aaKnown RBP10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 FAM76AQ8TAV0 307 aa10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 CFAP57Q96MR6 1250 aa10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 IFT122Q9HBG6 1241 aa10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 LRRC4Q9HBW1 653 aa10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 DBNLQ9UJU6 430 aaKnown RBP10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 CACNB3P54284 484 aa10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 STXBP2Q15833 593 aa10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 CDC37Q16543 378 aaPredicted RBP10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 C7orf31Q8N865 590 aa10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 PI4K2BQ8TCG2 481 aa10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 NT5C1BQ96P26 610 aa10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 ACCSQ96QU6 501 aa10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 SLF1Q9BQI6 1058 aa10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 ANAPC5Q9UJX4 755 aa10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 DENND3A2RUS2 1198 aa10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 CARD6Q9BX69 1037 aa10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 IRAK4Q9NWZ3 460 aa10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 PCDHA4Q9UN74 947 aa10.7□□□□□ -0.7
CLTCL1-211ENST00000621271 COL15A1P39059 1388 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 PRAMEF22A3QJZ6 481 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 ARMCX2Q7L311 632 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 FASTKD5Q7L8L6 764 aaKnown RBP10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 TTC30AQ86WT1 665 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 CTAGE3PQ8IX95 158 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 GIMAP8Q8ND71 665 aaPredicted RBP10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 RNF139Q8WU17 664 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 TSKSQ9UJT2 592 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 BTBD18B2RXH4 712 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 USP17L10C9JJH3 530 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 PRPSAP1Q14558 356 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 TYW1BQ6NUM6 668 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 NLRP4Q96MN2 994 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 PIDD1Q9HB75 910 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 AMFRQ9UKV5 643 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 PCDHB4Q9Y5E5 795 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 ABCC4O15439 1325 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 ADD2P35612 726 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 MFAP3P55082 362 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 LCORLQ8N3X6 602 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 DYNLL2Q96FJ2 89 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 ATP7BP35670 1465 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 WDR64B1ANS9 1081 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 PFKFB2O60825 505 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 GSPT1P15170 499 aaKnown RBP10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 NFKBIAP25963 317 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 PTGDRQ13258 359 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 MAP7Q14244 749 aa10.69□□□□□ -0.7
CLTCL1-211ENST00000621271 ZMYM1Q5SVZ6 1142 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms