RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 MPHOSPH8Q99549 860 aa9.42□□□□□ -0.9
VMP1-213ENST00000591877 ANKRD2Q9GZV1 360 aa9.42□□□□□ -0.9
VMP1-213ENST00000591877 LIN7BQ9HAP6 207 aa9.42□□□□□ -0.9
VMP1-213ENST00000591877 LATS2Q9NRM7 1088 aa9.42□□□□□ -0.9
VMP1-213ENST00000591877 KANSL3Q9P2N6 904 aa9.42□□□□□ -0.9
VMP1-213ENST00000591877 NAGPAQ9UK23 515 aa9.42□□□□□ -0.9
VMP1-213ENST00000591877 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.42□□□□□ -0.9
VMP1-213ENST00000591877 ADM5C9JUS6 153 aa9.41□□□□□ -0.9
VMP1-213ENST00000591877 RGS9O75916 674 aaPredicted RBP9.41□□□□□ -0.9
VMP1-213ENST00000591877 FCGRTP55899 365 aa9.41□□□□□ -0.9
VMP1-213ENST00000591877 PLAURQ03405 335 aa9.41□□□□□ -0.9
VMP1-213ENST00000591877 IFIT5Q13325 482 aaKnown RBP9.41□□□□□ -0.9
VMP1-213ENST00000591877 PRR23CQ6ZRP0 262 aa9.41□□□□□ -0.9
VMP1-213ENST00000591877 RELL1Q8IUW5 271 aa9.41□□□□□ -0.9
VMP1-213ENST00000591877 KIAA0825Q8IV33 1275 aa9.41□□□□□ -0.9
VMP1-213ENST00000591877 CAPNS2Q96L46 248 aa9.41□□□□□ -0.9
VMP1-213ENST00000591877 TCF12Q99081 682 aa9.41□□□□□ -0.9
VMP1-213ENST00000591877 SPON2Q9BUD6 331 aa9.41□□□□□ -0.9
VMP1-213ENST00000591877 CEP44Q9C0F1 390 aa9.41□□□□□ -0.9
VMP1-213ENST00000591877 COA1Q9GZY4 146 aa9.41□□□□□ -0.9
VMP1-213ENST00000591877 ZNF408Q9H9D4 720 aa9.41□□□□□ -0.9
VMP1-213ENST00000591877 COPRSQ9NQ92 184 aa9.41□□□□□ -0.9
VMP1-213ENST00000591877 DNAJB12Q9NXW2 375 aaKnown RBP9.41□□□□□ -0.9
VMP1-213ENST00000591877 C9orf78Q9NZ63 289 aaPredicted RBP9.41□□□□□ -0.9
VMP1-213ENST00000591877 ZFATQ9P243 1243 aa9.41□□□□□ -0.9
VMP1-213ENST00000591877 AOC2O75106 756 aa9.4□□□□□ -0.9
VMP1-213ENST00000591877 STK10O94804 968 aaKnown RBP9.4□□□□□ -0.9
VMP1-213ENST00000591877 IRAK1P51617 712 aa9.4□□□□□ -0.9
VMP1-213ENST00000591877 STRIP1Q5VSL9 837 aa9.4□□□□□ -0.9
VMP1-213ENST00000591877 C15orf52Q6ZUT6 534 aaKnown RBP9.4□□□□□ -0.9
VMP1-213ENST00000591877 KRT26Q7Z3Y9 468 aa9.4□□□□□ -0.9
VMP1-213ENST00000591877 TMEM74Q96NL1 305 aa9.4□□□□□ -0.9
VMP1-213ENST00000591877 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.4□□□□□ -0.96e-8■■■■■ 29.7
VMP1-213ENST00000591877 PUS3Q9BZE2 481 aaKnown RBP9.4□□□□□ -0.9
VMP1-213ENST00000591877 MYOZ2Q9NPC6 264 aa9.4□□□□□ -0.9
VMP1-213ENST00000591877 GGA3Q9NZ52 723 aa9.4□□□□□ -0.9
VMP1-213ENST00000591877 PTPRCP08575 1304 aa9.39□□□□□ -0.91
VMP1-213ENST00000591877 NFKB1P19838 968 aa9.39□□□□□ -0.91
VMP1-213ENST00000591877 GRM1Q13255 1194 aa9.39□□□□□ -0.91
VMP1-213ENST00000591877 CCDC57Q2TAC2 916 aa9.39□□□□□ -0.91
VMP1-213ENST00000591877 RABL6Q3YEC7 729 aaPredicted RBP9.39□□□□□ -0.91
VMP1-213ENST00000591877 ANGEL2Q5VTE6 544 aaKnown RBP9.39□□□□□ -0.91
VMP1-213ENST00000591877 LDHAL6AQ6ZMR3 332 aa9.39□□□□□ -0.91
VMP1-213ENST00000591877 DTHD1Q6ZMT9 781 aa9.39□□□□□ -0.91
VMP1-213ENST00000591877 KRT25Q7Z3Z0 450 aa9.39□□□□□ -0.91
VMP1-213ENST00000591877 NCAPG2Q86XI2 1143 aa9.39□□□□□ -0.91
VMP1-213ENST00000591877 ANKRD44Q8N8A2 993 aa9.39□□□□□ -0.91
VMP1-213ENST00000591877 DCPSQ96C86 337 aaKnown RBP9.39□□□□□ -0.91
VMP1-213ENST00000591877 HHIPL1Q96JK4 782 aa9.39□□□□□ -0.91
VMP1-213ENST00000591877 ZKSCAN3Q9BRR0 538 aa9.39□□□□□ -0.91
VMP1-213ENST00000591877 BHLHE41Q9C0J9 482 aaPredicted RBP9.39□□□□□ -0.91
VMP1-213ENST00000591877 USP44Q9H0E7 712 aa9.39□□□□□ -0.91
VMP1-213ENST00000591877 BICC1Q9H694 974 aaKnown RBP9.39□□□□□ -0.91
VMP1-213ENST00000591877 CD209Q9NNX6 404 aa9.39□□□□□ -0.91
VMP1-213ENST00000591877 SCAF8Q9UPN6 1271 aaKnown RBP9.39□□□□□ -0.91
VMP1-213ENST00000591877 ECM29Q5VYK3 1845 aa9.39□□□□□ -0.91
VMP1-213ENST00000591877 PLIN1O60240 522 aa9.38□□□□□ -0.91
VMP1-213ENST00000591877 ITPKAP23677 461 aa9.38□□□□□ -0.91
VMP1-213ENST00000591877 ECE1P42892 770 aa9.38□□□□□ -0.91
VMP1-213ENST00000591877 NRLP54845 237 aa9.38□□□□□ -0.91
VMP1-213ENST00000591877 COL9A2Q14055 689 aaPredicted RBP9.38□□□□□ -0.91
VMP1-213ENST00000591877 NBPF9Q3BBW0 867 aa9.38□□□□□ -0.91
VMP1-213ENST00000591877 ALDH1L2Q3SY69 923 aa9.38□□□□□ -0.91
VMP1-213ENST00000591877 RPS26P11Q5JNZ5 115 aaPredicted RBP9.38□□□□□ -0.91
VMP1-213ENST00000591877 TTLL5Q6EMB2 1281 aa9.38□□□□□ -0.91
VMP1-213ENST00000591877 FBXO11Q86XK2 927 aa9.38□□□□□ -0.91
VMP1-213ENST00000591877 CERS5Q8N5B7 392 aa9.38□□□□□ -0.91
VMP1-213ENST00000591877 CEP120Q8N960 986 aa9.38□□□□□ -0.91
VMP1-213ENST00000591877 OSMRQ99650 979 aa9.38□□□□□ -0.91
VMP1-213ENST00000591877 ADAMTS1Q9UHI8 967 aa9.38□□□□□ -0.91
VMP1-213ENST00000591877 STRIP2Q9ULQ0 834 aa9.38□□□□□ -0.91
VMP1-213ENST00000591877 MYO3BQ8WXR4 1341 aa9.37□□□□□ -0.91
VMP1-213ENST00000591877 WNT10BO00744 389 aa9.37□□□□□ -0.91
VMP1-213ENST00000591877 HSPA8P11142 646 aaKnown RBP9.37□□□□□ -0.91
VMP1-213ENST00000591877 IL1R1P14778 569 aa9.37□□□□□ -0.91
VMP1-213ENST00000591877 TAL1P17542 331 aaPredicted RBP9.37□□□□□ -0.91
VMP1-213ENST00000591877 FSTP19883 344 aa9.37□□□□□ -0.91
VMP1-213ENST00000591877 EIF4A3P38919 411 aaKnown RBP9.37□□□□□ -0.91
VMP1-213ENST00000591877 KCNJ4P48050 445 aa9.37□□□□□ -0.91
VMP1-213ENST00000591877 LBX1P52954 281 aa9.37□□□□□ -0.91
VMP1-213ENST00000591877 MAP2K1Q02750 393 aaPredicted RBP9.37□□□□□ -0.91
VMP1-213ENST00000591877 CDCA5Q96FF9 252 aa9.37□□□□□ -0.91
VMP1-213ENST00000591877 ZBED3Q96IU2 234 aaPredicted RBP9.37□□□□□ -0.91
VMP1-213ENST00000591877 RHOVQ96L33 236 aa9.37□□□□□ -0.91
VMP1-213ENST00000591877 GBA2Q9HCG7 927 aaPredicted RBP9.37□□□□□ -0.91
VMP1-213ENST00000591877 PRDM10Q9NQV6 1147 aa9.37□□□□□ -0.91
VMP1-213ENST00000591877 CNNM1Q9NRU3 951 aa9.37□□□□□ -0.91
VMP1-213ENST00000591877 AKAP2Q9Y2D5 859 aa9.37□□□□□ -0.91
VMP1-213ENST00000591877 RIPOR2Q9Y4F9 1068 aa9.37□□□□□ -0.91
VMP1-213ENST00000591877 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.37□□□□□ -0.91
VMP1-213ENST00000591877 ARAP2Q8WZ64 1704 aa9.36□□□□□ -0.91
VMP1-213ENST00000591877 PITPNM2Q9BZ72 1349 aa9.36□□□□□ -0.91
VMP1-213ENST00000591877 FAM155AB1AL88 458 aaPredicted RBP9.36□□□□□ -0.91
VMP1-213ENST00000591877 GBP2P32456 591 aaPredicted RBP9.36□□□□□ -0.91
VMP1-213ENST00000591877 MAP2K2P36507 400 aa9.36□□□□□ -0.91
VMP1-213ENST00000591877 CTCFP49711 727 aaPredicted RBP9.36□□□□□ -0.91
VMP1-213ENST00000591877 HUNKP57058 714 aa9.36□□□□□ -0.91
VMP1-213ENST00000591877 CCDC144BQ3MJ40 725 aa9.36□□□□□ -0.91
VMP1-213ENST00000591877 LRRC24Q50LG9 513 aa9.36□□□□□ -0.91
VMP1-213ENST00000591877 TAF7LQ5H9L4 462 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms