RNA–Protein interactions for RNA: ENST00000590234.5

CXXC1-213, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-213ENST00000590234 V9GY48 417 aaPredicted RBP16.87■□□□□ 0.29
CXXC1-213ENST00000590234 SYNRGQ9UMZ2 1314 aa16.87■□□□□ 0.29
CXXC1-213ENST00000590234 MKI67P46013 3256 aaKnown RBP16.86■□□□□ 0.29
CXXC1-213ENST00000590234 hCG_1984214I3L0E3 225 aa16.86■□□□□ 0.29
CXXC1-213ENST00000590234 COL6A1P12109 1028 aa16.86■□□□□ 0.29
CXXC1-213ENST00000590234 CCT2P78371 535 aaKnown RBP16.86■□□□□ 0.29
CXXC1-213ENST00000590234 WWC2Q6AWC2 1192 aa16.86■□□□□ 0.29
CXXC1-213ENST00000590234 NOL8Q76FK4 1167 aaKnown RBP16.86■□□□□ 0.29
CXXC1-213ENST00000590234 FCHSD1Q86WN1 690 aa16.86■□□□□ 0.29
CXXC1-213ENST00000590234 ZNF713Q8N859 430 aaPredicted RBP16.86■□□□□ 0.29
CXXC1-213ENST00000590234 SMARCC2Q8TAQ2 1214 aa16.86■□□□□ 0.29
CXXC1-213ENST00000590234 CUL5Q93034 780 aa16.86■□□□□ 0.29
CXXC1-213ENST00000590234 LARP6Q9BRS8 491 aaKnown RBP16.86■□□□□ 0.29
CXXC1-213ENST00000590234 ALDH8A1Q9H2A2 487 aaPredicted RBP16.86■□□□□ 0.29
CXXC1-213ENST00000590234 PIK3CDO00329 1044 aa16.85■□□□□ 0.29
CXXC1-213ENST00000590234 ADAMTS4O75173 837 aa16.85■□□□□ 0.29
CXXC1-213ENST00000590234 ANKRD1Q15327 319 aa16.85■□□□□ 0.29
CXXC1-213ENST00000590234 STXBP2Q15833 593 aa16.85■□□□□ 0.29
CXXC1-213ENST00000590234 IQSEC1Q6DN90 963 aa16.85■□□□□ 0.29
CXXC1-213ENST00000590234 PPP1R18Q6NYC8 613 aa16.85■□□□□ 0.29
CXXC1-213ENST00000590234 PSTPIP2Q9H939 334 aa16.85■□□□□ 0.29
CXXC1-213ENST00000590234 SPC25Q9HBM1 224 aa16.85■□□□□ 0.29
CXXC1-213ENST00000590234 NCOA5Q9HCD5 579 aaKnown RBP16.85■□□□□ 0.29
CXXC1-213ENST00000590234 RBM27Q9P2N5 1060 aaKnown RBP16.85■□□□□ 0.29
CXXC1-213ENST00000590234 TNRC18O15417 2968 aaPredicted RBP16.84■□□□□ 0.29
CXXC1-213ENST00000590234 RBM47A0AV96 593 aaKnown RBP16.84■□□□□ 0.29
CXXC1-213ENST00000590234 MEIS2O14770 477 aa16.84■□□□□ 0.29
CXXC1-213ENST00000590234 NR3C2P08235 984 aa16.84■□□□□ 0.29
CXXC1-213ENST00000590234 C6orf222P0C671 652 aaPredicted RBP16.84■□□□□ 0.29
CXXC1-213ENST00000590234 IFNAR1P17181 557 aa16.84■□□□□ 0.29
CXXC1-213ENST00000590234 SMPD1P17405 629 aa16.84■□□□□ 0.29
CXXC1-213ENST00000590234 AK2P54819 239 aa16.84■□□□□ 0.29
CXXC1-213ENST00000590234 NAPAP54920 295 aa16.84■□□□□ 0.29
CXXC1-213ENST00000590234 STK3Q13188 491 aa16.84■□□□□ 0.29
CXXC1-213ENST00000590234 NTRK3Q16288 839 aa16.84■□□□□ 0.29
CXXC1-213ENST00000590234 PFKFB3Q16875 520 aaPredicted RBP16.84■□□□□ 0.29
CXXC1-213ENST00000590234 USP17L6PQ6QN14 398 aa16.84■□□□□ 0.29
CXXC1-213ENST00000590234 TLK2Q86UE8 772 aa16.84■□□□□ 0.29
CXXC1-213ENST00000590234 DPF3Q92784 378 aa16.84■□□□□ 0.29
CXXC1-213ENST00000590234 PHKBQ93100 1093 aa16.84■□□□□ 0.29
CXXC1-213ENST00000590234 PDCD2LQ9BRP1 358 aa16.84■□□□□ 0.29
CXXC1-213ENST00000590234 WDR11Q9BZH6 1224 aa16.84■□□□□ 0.29
CXXC1-213ENST00000590234 SENP6Q9GZR1 1112 aaPredicted RBP16.84■□□□□ 0.29
CXXC1-213ENST00000590234 UPF3AQ9H1J1 476 aaKnown RBP16.84■□□□□ 0.29
CXXC1-213ENST00000590234 GNEQ9Y223 722 aaKnown RBP16.84■□□□□ 0.29
CXXC1-213ENST00000590234 CPLX1O14810 134 aa16.83■□□□□ 0.28
CXXC1-213ENST00000590234 PRPF3O43395 683 aaKnown RBP16.83■□□□□ 0.28
CXXC1-213ENST00000590234 SCG2P13521 617 aa16.83■□□□□ 0.28
CXXC1-213ENST00000590234 CST5P28325 142 aaPredicted RBP16.83■□□□□ 0.28
CXXC1-213ENST00000590234 NEK4P51957 841 aa16.83■□□□□ 0.28
CXXC1-213ENST00000590234 GJA9P57773 515 aa16.83■□□□□ 0.28
CXXC1-213ENST00000590234 AKAP17AQ02040 695 aaKnown RBP16.83■□□□□ 0.28
CXXC1-213ENST00000590234 PGM5Q15124 567 aa16.83■□□□□ 0.28
CXXC1-213ENST00000590234 DUSP28Q4G0W2 176 aa16.83■□□□□ 0.28
CXXC1-213ENST00000590234 SCFD2Q8WU76 684 aa16.83■□□□□ 0.28
CXXC1-213ENST00000590234 SLC26A6Q9BXS9 759 aa16.83■□□□□ 0.28
CXXC1-213ENST00000590234 RNF26Q9BY78 433 aaPredicted RBP16.83■□□□□ 0.28
CXXC1-213ENST00000590234 C22orf23Q9BZE7 217 aa16.83■□□□□ 0.28
CXXC1-213ENST00000590234 BARHL2Q9NY43 387 aa16.83■□□□□ 0.28
CXXC1-213ENST00000590234 TPCN1Q9ULQ1 816 aa16.83■□□□□ 0.28
CXXC1-213ENST00000590234 FRMPD4Q14CM0 1322 aa16.82■□□□□ 0.28
CXXC1-213ENST00000590234 MYADML2A6NDP7 307 aa16.82■□□□□ 0.28
CXXC1-213ENST00000590234 STXBP3O00186 592 aa16.82■□□□□ 0.28
CXXC1-213ENST00000590234 EIF3JO75822 258 aaKnown RBP16.82■□□□□ 0.28
CXXC1-213ENST00000590234 MYCLP12524 364 aaPredicted RBP16.82■□□□□ 0.28
CXXC1-213ENST00000590234 TTLL4Q14679 1199 aa16.82■□□□□ 0.28
CXXC1-213ENST00000590234 TMEM63BQ5T3F8 832 aa16.82■□□□□ 0.28
CXXC1-213ENST00000590234 TYW1BQ6NUM6 668 aa16.82■□□□□ 0.28
CXXC1-213ENST00000590234 CPLX2Q6PUV4 134 aaKnown RBP16.82■□□□□ 0.28
CXXC1-213ENST00000590234 SEPT14Q6ZU15 432 aa16.82■□□□□ 0.28
CXXC1-213ENST00000590234 KLHDC9Q8NEP7 349 aa16.82■□□□□ 0.28
CXXC1-213ENST00000590234 TSEN34Q9BSV6 310 aaKnown RBP16.82■□□□□ 0.28
CXXC1-213ENST00000590234 AP5M1Q9H0R1 490 aa16.82■□□□□ 0.28
CXXC1-213ENST00000590234 SLKQ9H2G2 1235 aaPredicted RBP16.82■□□□□ 0.28
CXXC1-213ENST00000590234 UPF2Q9HAU5 1272 aaKnown RBP16.82■□□□□ 0.28
CXXC1-213ENST00000590234 PHF24Q9UPV7 400 aa16.82■□□□□ 0.28
CXXC1-213ENST00000590234 Q9Y3F1 56 aa16.82■□□□□ 0.28
CXXC1-213ENST00000590234 PDE4DIPQ5VU43 2346 aa16.81■□□□□ 0.28
CXXC1-213ENST00000590234 KIAA1217Q5T5P2 1943 aa16.81■□□□□ 0.28
CXXC1-213ENST00000590234 ALPK3Q96L96 1907 aa16.81■□□□□ 0.28
CXXC1-213ENST00000590234 MOXD2PA6NHM9 499 aa16.81■□□□□ 0.28
CXXC1-213ENST00000590234 NKRFO15226 690 aaKnown RBP eCLIP16.81■□□□□ 0.28
CXXC1-213ENST00000590234 DYNC1LI2O43237 492 aaPredicted RBP16.81■□□□□ 0.28
CXXC1-213ENST00000590234 PPFIA3O75145 1194 aa16.81■□□□□ 0.28
CXXC1-213ENST00000590234 TXNP10599 105 aaKnown RBP16.81■□□□□ 0.28
CXXC1-213ENST00000590234 PTGS1P23219 599 aa16.81■□□□□ 0.28
CXXC1-213ENST00000590234 CCND2P30279 289 aa16.81■□□□□ 0.28
CXXC1-213ENST00000590234 ADCY7P51828 1080 aa16.81■□□□□ 0.28
CXXC1-213ENST00000590234 NKX3-2P78367 333 aa16.81■□□□□ 0.28
CXXC1-213ENST00000590234 IRX5P78411 483 aaPredicted RBP16.81■□□□□ 0.28
CXXC1-213ENST00000590234 KCNA10Q16322 511 aa16.81■□□□□ 0.28
CXXC1-213ENST00000590234 PKN1Q16512 942 aa16.81■□□□□ 0.28
CXXC1-213ENST00000590234 UBE2SQ16763 222 aa16.81■□□□□ 0.28
CXXC1-213ENST00000590234 GNASQ5JWF2 1037 aa16.81■□□□□ 0.28
CXXC1-213ENST00000590234 VSIG10LQ86VR7 867 aa16.81■□□□□ 0.28
CXXC1-213ENST00000590234 TEX2Q8IWB9 1127 aa16.81■□□□□ 0.28
CXXC1-213ENST00000590234 TRIM22Q8IYM9 498 aa16.81■□□□□ 0.28
CXXC1-213ENST00000590234 PCSK9Q8NBP7 692 aaKnown RBP16.81■□□□□ 0.28
CXXC1-213ENST00000590234 IL31RAQ8NI17 732 aa16.81■□□□□ 0.28
CXXC1-213ENST00000590234 FERMT2Q96AC1 680 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms