RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 NKRFO15226 690 aaKnown RBP eCLIP25.76■■□□□ 1.71
CAPNS1-205ENST00000588780 ALADP13716 330 aa25.76■■□□□ 1.71
CAPNS1-205ENST00000588780 RASGRP2Q7LDG7 609 aa25.76■■□□□ 1.71
CAPNS1-205ENST00000588780 GPATCH3Q96I76 525 aa25.76■■□□□ 1.71
CAPNS1-205ENST00000588780 TGS1Q96RS0 853 aaKnown RBP25.76■■□□□ 1.71
CAPNS1-205ENST00000588780 TET1Q8NFU7 2136 aa25.75■■□□□ 1.71
CAPNS1-205ENST00000588780 NFIBO00712 420 aa25.75■■□□□ 1.71
CAPNS1-205ENST00000588780 MRE11P49959 708 aa25.75■■□□□ 1.71
CAPNS1-205ENST00000588780 DEFB103AP81534 67 aa25.75■■□□□ 1.71
CAPNS1-205ENST00000588780 PPARAQ07869 468 aa25.75■■□□□ 1.71
CAPNS1-205ENST00000588780 FAM117BQ6P1L5 589 aa25.75■■□□□ 1.71
CAPNS1-205ENST00000588780 FAM178BQ8IXR5 827 aa25.75■■□□□ 1.71
CAPNS1-205ENST00000588780 AFAP1L1Q8TED9 768 aa25.75■■□□□ 1.71
CAPNS1-205ENST00000588780 SCFD2Q8WU76 684 aa25.75■■□□□ 1.71
CAPNS1-205ENST00000588780 COPS5Q92905 334 aa25.75■■□□□ 1.71
CAPNS1-205ENST00000588780 SUGCTQ9HAC7 445 aa25.75■■□□□ 1.71
CAPNS1-205ENST00000588780 TANC1Q9C0D5 1861 aa25.74■■□□□ 1.71
CAPNS1-205ENST00000588780 RBM47A0AV96 593 aaKnown RBP25.74■■□□□ 1.71
CAPNS1-205ENST00000588780 TXNP10599 105 aaKnown RBP25.74■■□□□ 1.71
CAPNS1-205ENST00000588780 SLC16A2P36021 539 aa25.74■■□□□ 1.71
CAPNS1-205ENST00000588780 HNRNPUQ00839 825 aaKnown RBP eCLIP25.74■■□□□ 1.71
CAPNS1-205ENST00000588780 LEXMQ3ZCV2 418 aa25.74■■□□□ 1.71
CAPNS1-205ENST00000588780 PTCRAQ6ISU1 281 aaPredicted RBP25.74■■□□□ 1.71
CAPNS1-205ENST00000588780 CAGE1Q8TC20 777 aa25.74■■□□□ 1.71
CAPNS1-205ENST00000588780 RAD9AQ99638 391 aa25.74■■□□□ 1.71
CAPNS1-205ENST00000588780 ZBTB40Q9NUA8 1239 aa25.74■■□□□ 1.71
CAPNS1-205ENST00000588780 SCN10AQ9Y5Y9 1956 aa25.73■■□□□ 1.71
CAPNS1-205ENST00000588780 LOC102724159A0A0B4J2E5 919 aa25.73■■□□□ 1.71
CAPNS1-205ENST00000588780 PWP2Q15269 919 aaKnown RBP25.73■■□□□ 1.71
CAPNS1-205ENST00000588780 CNKSR3Q6P9H4 555 aa25.73■■□□□ 1.71
CAPNS1-205ENST00000588780 SLC30A10Q6XR72 485 aa25.73■■□□□ 1.71
CAPNS1-205ENST00000588780 LRRC8DQ7L1W4 858 aa25.73■■□□□ 1.71
CAPNS1-205ENST00000588780 A6NJR5 290 aa25.72■■□□□ 1.71
CAPNS1-205ENST00000588780 NMT2O60551 498 aa25.72■■□□□ 1.71
CAPNS1-205ENST00000588780 IL9P15248 144 aa25.72■■□□□ 1.71
CAPNS1-205ENST00000588780 SELPP16109 830 aa25.72■■□□□ 1.71
CAPNS1-205ENST00000588780 TSHZ3Q63HK5 1081 aa25.72■■□□□ 1.71
CAPNS1-205ENST00000588780 RNF207Q6ZRF8 634 aa25.72■■□□□ 1.71
CAPNS1-205ENST00000588780 EP400NLQ6ZTU2 488 aa25.72■■□□□ 1.71
CAPNS1-205ENST00000588780 RANBP17Q9H2T7 1088 aaKnown RBP25.72■■□□□ 1.71
CAPNS1-205ENST00000588780 LCTP09848 1927 aa25.72■■□□□ 1.71
CAPNS1-205ENST00000588780 TRIP12Q14669 1992 aaPredicted RBP25.71■■□□□ 1.71
CAPNS1-205ENST00000588780 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.71■■□□□ 1.71
CAPNS1-205ENST00000588780 B4DLN1 442 aa25.71■■□□□ 1.71
CAPNS1-205ENST00000588780 MRPL12P52815 198 aaKnown RBP25.71■■□□□ 1.71
CAPNS1-205ENST00000588780 ERVK-21P61565 698 aa25.71■■□□□ 1.71
CAPNS1-205ENST00000588780 SYDE2Q5VT97 1194 aa25.71■■□□□ 1.71
CAPNS1-205ENST00000588780 TTBK2Q6IQ55 1244 aa25.71■■□□□ 1.71
CAPNS1-205ENST00000588780 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.71■■□□□ 1.71
CAPNS1-205ENST00000588780 DCAF4Q8WV16 495 aa25.71■■□□□ 1.71
CAPNS1-205ENST00000588780 CHMP4BQ9H444 224 aaKnown RBP25.71■■□□□ 1.71
CAPNS1-205ENST00000588780 LINC01553A4QN01 128 aa25.7■■□□□ 1.7
CAPNS1-205ENST00000588780 RANBP6O60518 1105 aaKnown RBP25.7■■□□□ 1.7
CAPNS1-205ENST00000588780 GJB5O95377 273 aa25.7■■□□□ 1.7
CAPNS1-205ENST00000588780 GPCPD1Q9NPB8 672 aa25.7■■□□□ 1.7
CAPNS1-205ENST00000588780 FRMPD2Q68DX3 1309 aaPredicted RBP25.69■■□□□ 1.7
CAPNS1-205ENST00000588780 IKBKEQ14164 716 aa25.69■■□□□ 1.7
CAPNS1-205ENST00000588780 GDF6Q6KF10 455 aaPredicted RBP25.69■■□□□ 1.7
CAPNS1-205ENST00000588780 FBXO22Q8NEZ5 403 aa25.69■■□□□ 1.7
CAPNS1-205ENST00000588780 SEC62Q99442 399 aaKnown RBP25.69■■□□□ 1.7
CAPNS1-205ENST00000588780 IL17RBQ9NRM6 502 aa25.69■■□□□ 1.7
CAPNS1-205ENST00000588780 ABHD14A-ACY1A0A1B0GW23 586 aa25.68■■□□□ 1.7
CAPNS1-205ENST00000588780 PARNO95453 639 aaKnown RBP25.68■■□□□ 1.7
CAPNS1-205ENST00000588780 CTDSPL2Q05D32 466 aa25.68■■□□□ 1.7
CAPNS1-205ENST00000588780 CHST3Q7LGC8 479 aa25.68■■□□□ 1.7
CAPNS1-205ENST00000588780 AFG1LQ8WV93 481 aa25.68■■□□□ 1.7
CAPNS1-205ENST00000588780 INCENPQ9NQS7 918 aa25.68■■□□□ 1.7
CAPNS1-205ENST00000588780 TOMM22Q9NS69 142 aa25.68■■□□□ 1.7
CAPNS1-205ENST00000588780 PTPRSQ13332 1948 aa25.67■■□□□ 1.7
CAPNS1-205ENST00000588780 EFCAB14O75071 495 aa25.67■■□□□ 1.7
CAPNS1-205ENST00000588780 RPS6P62753 249 aaKnown RBP25.67■■□□□ 1.7
CAPNS1-205ENST00000588780 PUS10Q3MIT2 529 aaKnown RBP25.67■■□□□ 1.7
CAPNS1-205ENST00000588780 H3BQ06 376 aaPredicted RBP25.66■■□□□ 1.7
CAPNS1-205ENST00000588780 DCXO43602 365 aa25.66■■□□□ 1.7
CAPNS1-205ENST00000588780 NHLH1Q02575 133 aa25.66■■□□□ 1.7
CAPNS1-205ENST00000588780 C7orf31Q8N865 590 aa25.66■■□□□ 1.7
CAPNS1-205ENST00000588780 CTNNA3Q9UI47 895 aa25.66■■□□□ 1.7
CAPNS1-205ENST00000588780 GRXCR2A6NFK2 248 aa25.65■■□□□ 1.7
CAPNS1-205ENST00000588780 NBNO60934 754 aa25.65■■□□□ 1.7
CAPNS1-205ENST00000588780 CKBP12277 381 aa25.65■■□□□ 1.7
CAPNS1-205ENST00000588780 GPNMBQ14956 572 aa25.65■■□□□ 1.7
CAPNS1-205ENST00000588780 PTPROQ16827 1216 aa25.65■■□□□ 1.7
CAPNS1-205ENST00000588780 DNERQ8NFT8 737 aa25.65■■□□□ 1.7
CAPNS1-205ENST00000588780 CLEC4DQ8WXI8 215 aa25.65■■□□□ 1.7
CAPNS1-205ENST00000588780 C17orf80Q9BSJ5 609 aa25.65■■□□□ 1.7
CAPNS1-205ENST00000588780 ALG1Q9BT22 464 aa25.65■■□□□ 1.7
CAPNS1-205ENST00000588780 PNMA2Q9UL42 364 aa25.65■■□□□ 1.7
CAPNS1-205ENST00000588780 ARIH2O95376 493 aa25.64■■□□□ 1.7
CAPNS1-205ENST00000588780 MMP3P08254 477 aa25.64■■□□□ 1.7
CAPNS1-205ENST00000588780 CASTP20810 708 aaKnown RBP25.64■■□□□ 1.7
CAPNS1-205ENST00000588780 SEPT14Q6ZU15 432 aa25.64■■□□□ 1.7
CAPNS1-205ENST00000588780 DHX38Q92620 1227 aaKnown RBP25.64■■□□□ 1.7
CAPNS1-205ENST00000588780 FBXL18Q96ME1 805 aa25.64■■□□□ 1.7
CAPNS1-205ENST00000588780 FSD1Q9BTV5 496 aa25.64■■□□□ 1.7
CAPNS1-205ENST00000588780 FAM50BQ9Y247 325 aa25.64■■□□□ 1.7
CAPNS1-205ENST00000588780 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.64■■□□□ 1.7
CAPNS1-205ENST00000588780 INSL6Q9Y581 213 aa25.64■■□□□ 1.7
CAPNS1-205ENST00000588780 GH1P01241 217 aa25.63■■□□□ 1.69
CAPNS1-205ENST00000588780 CXCL10P02778 98 aa25.63■■□□□ 1.69
CAPNS1-205ENST00000588780 EDNRBP24530 442 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms