RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 LDHBP07195 334 aaKnown RBP11.68□□□□□ -0.54
RNF43-207ENST00000583753 CSF1RP07333 972 aa11.68□□□□□ -0.54
RNF43-207ENST00000583753 ASIC2Q16515 512 aa11.68□□□□□ -0.54
RNF43-207ENST00000583753 VPS36Q86VN1 386 aa11.68□□□□□ -0.54
RNF43-207ENST00000583753 MON2Q7Z3U7 1717 aa11.68□□□□□ -0.54
RNF43-207ENST00000583753 AGLP35573 1532 aa11.67□□□□□ -0.54
RNF43-207ENST00000583753 GNA11P29992 359 aa11.67□□□□□ -0.54
RNF43-207ENST00000583753 RBM5P52756 815 aaKnown RBP eCLIP11.67□□□□□ -0.54
RNF43-207ENST00000583753 CCDC84Q86UT8 332 aaPredicted RBP11.67□□□□□ -0.54
RNF43-207ENST00000583753 REXO1Q8N1G1 1221 aaKnown RBP11.67□□□□□ -0.54
RNF43-207ENST00000583753 ZIM3Q96PE6 472 aa11.67□□□□□ -0.54
RNF43-207ENST00000583753 SNX12Q9UMY4 172 aa11.67□□□□□ -0.54
RNF43-207ENST00000583753 REXO2Q9Y3B8 237 aaKnown RBP11.67□□□□□ -0.54
RNF43-207ENST00000583753 PCDHB13Q9Y5F0 798 aa11.67□□□□□ -0.54
RNF43-207ENST00000583753 C6orf229H3BNL8 230 aa11.67□□□□□ -0.54
RNF43-207ENST00000583753 KRIT1O00522 736 aa11.67□□□□□ -0.54
RNF43-207ENST00000583753 BAG3O95817 575 aa11.67□□□□□ -0.54
RNF43-207ENST00000583753 MECOMQ03112 1051 aa11.67□□□□□ -0.54
RNF43-207ENST00000583753 PPP2R5BQ15173 497 aa11.67□□□□□ -0.54
RNF43-207ENST00000583753 ALX1Q15699 326 aa11.67□□□□□ -0.54
RNF43-207ENST00000583753 MCTP2Q6DN12 878 aa11.67□□□□□ -0.54
RNF43-207ENST00000583753 NLRP3Q96P20 1036 aa11.67□□□□□ -0.54
RNF43-207ENST00000583753 NOVA2Q9UNW9 492 aaKnown RBP11.67□□□□□ -0.54
RNF43-207ENST00000583753 PLAAQ9Y263 795 aa11.67□□□□□ -0.54
RNF43-207ENST00000583753 CDHR2Q9BYE9 1310 aa11.67□□□□□ -0.54
RNF43-207ENST00000583753 SLCO1A2P46721 670 aa11.67□□□□□ -0.54
RNF43-207ENST00000583753 MAEAQ7L5Y9 396 aa11.67□□□□□ -0.54
RNF43-207ENST00000583753 PEX26Q7Z412 305 aa11.67□□□□□ -0.54
RNF43-207ENST00000583753 ABCC12Q96J65 1359 aa11.66□□□□□ -0.54
RNF43-207ENST00000583753 FAM208AQ9UK61 1670 aaKnown RBP11.66□□□□□ -0.54
RNF43-207ENST00000583753 ADAMTS3O15072 1205 aa11.66□□□□□ -0.54
RNF43-207ENST00000583753 CLTAP09496 248 aa11.66□□□□□ -0.54
RNF43-207ENST00000583753 TMOD1P28289 359 aa11.66□□□□□ -0.54
RNF43-207ENST00000583753 U2AF1L4Q8WU68 220 aaKnown RBP11.66□□□□□ -0.54
RNF43-207ENST00000583753 MRRFQ96E11 262 aaKnown RBP11.66□□□□□ -0.54
RNF43-207ENST00000583753 FAM212AQ96EL1 285 aa11.66□□□□□ -0.54
RNF43-207ENST00000583753 PIGSQ96S52 555 aa11.66□□□□□ -0.54
RNF43-207ENST00000583753 DDX47Q9H0S4 455 aaKnown RBP11.66□□□□□ -0.54
RNF43-207ENST00000583753 THAP9Q9H5L6 903 aa11.66□□□□□ -0.54
RNF43-207ENST00000583753 ATP8A1Q9Y2Q0 1164 aa11.66□□□□□ -0.54
RNF43-207ENST00000583753 FAM205AQ6ZU69 1335 aa11.66□□□□□ -0.54
RNF43-207ENST00000583753 PPP1R7Q15435 360 aa11.66□□□□□ -0.54
RNF43-207ENST00000583753 VWA3BQ502W6 1294 aa11.66□□□□□ -0.54
RNF43-207ENST00000583753 NEK8Q86SG6 692 aa11.66□□□□□ -0.54
RNF43-207ENST00000583753 ARFGAP2Q8N6H7 521 aa11.66□□□□□ -0.54
RNF43-207ENST00000583753 TSEN2Q8NCE0 465 aaKnown RBP11.66□□□□□ -0.54
RNF43-207ENST00000583753 DHTKD1Q96HY7 919 aaPredicted RBP11.66□□□□□ -0.54
RNF43-207ENST00000583753 KCNK9Q9NPC2 374 aa11.66□□□□□ -0.54
RNF43-207ENST00000583753 BCS1LQ9Y276 419 aa11.66□□□□□ -0.54
RNF43-207ENST00000583753 PSMD14O00487 310 aa11.66□□□□□ -0.54
RNF43-207ENST00000583753 DDAH1O94760 285 aa11.66□□□□□ -0.54
RNF43-207ENST00000583753 TROAPQ12815 778 aa11.66□□□□□ -0.54
RNF43-207ENST00000583753 UBE2SQ16763 222 aa11.66□□□□□ -0.54
RNF43-207ENST00000583753 PFKFB3Q16875 520 aaPredicted RBP11.66□□□□□ -0.54
RNF43-207ENST00000583753 ERFEQ4G0M1 354 aa11.66□□□□□ -0.54
RNF43-207ENST00000583753 CCDC170Q8IYT3 715 aa11.66□□□□□ -0.54
RNF43-207ENST00000583753 KIRREL3Q8IZU9 778 aa11.66□□□□□ -0.54
RNF43-207ENST00000583753 TCP11Q8WWU5 503 aa11.66□□□□□ -0.54
RNF43-207ENST00000583753 CD248Q9HCU0 757 aa11.66□□□□□ -0.54
RNF43-207ENST00000583753 GGT7Q9UJ14 662 aa11.66□□□□□ -0.54
RNF43-207ENST00000583753 TCRBV5S4A2TA0A5A2 114 aa11.65□□□□□ -0.54
RNF43-207ENST00000583753 ARHGAP44Q17R89 818 aa11.65□□□□□ -0.54
RNF43-207ENST00000583753 NT5DC1Q5TFE4 455 aa11.65□□□□□ -0.54
RNF43-207ENST00000583753 TEX11Q8IYF3 940 aa11.65□□□□□ -0.54
RNF43-207ENST00000583753 MYOCDQ8IZQ8 938 aa11.65□□□□□ -0.54
RNF43-207ENST00000583753 FNBP4Q8N3X1 1017 aaPredicted RBP11.65□□□□□ -0.54
RNF43-207ENST00000583753 RNPC3Q96LT9 517 aaKnown RBP11.65□□□□□ -0.54
RNF43-207ENST00000583753 ZNF219Q9P2Y4 722 aaPredicted RBP11.65□□□□□ -0.54
RNF43-207ENST00000583753 WDR17Q8IZU2 1322 aa11.65□□□□□ -0.54
RNF43-207ENST00000583753 RIMBP3CA6NJZ7 1639 aa11.65□□□□□ -0.54
RNF43-207ENST00000583753 RIMBP3BA6NNM3 1639 aa11.65□□□□□ -0.54
RNF43-207ENST00000583753 RIMBP3Q9UFD9 1639 aa11.65□□□□□ -0.54
RNF43-207ENST00000583753 GSTTP1A0A1W2PQM5 241 aa11.65□□□□□ -0.54
RNF43-207ENST00000583753 MEIS1O00470 390 aa11.65□□□□□ -0.54
RNF43-207ENST00000583753 EIF3HO15372 352 aaKnown RBP eCLIP11.65□□□□□ -0.542e-7■■□□□ 12.4
RNF43-207ENST00000583753 EZRP15311 586 aaKnown RBP11.65□□□□□ -0.54
RNF43-207ENST00000583753 HNRNPH1P31943 449 aaKnown RBP11.65□□□□□ -0.54
RNF43-207ENST00000583753 SLC16A2P36021 539 aa11.65□□□□□ -0.54
RNF43-207ENST00000583753 CLNS1AP54105 237 aaKnown RBP11.65□□□□□ -0.54
RNF43-207ENST00000583753 CYP4A11Q02928 519 aa11.65□□□□□ -0.54
RNF43-207ENST00000583753 MTRQ99707 1265 aa11.65□□□□□ -0.54
RNF43-207ENST00000583753 CD2APQ9Y5K6 639 aa11.65□□□□□ -0.54
RNF43-207ENST00000583753 TMEM94Q12767 1356 aa11.65□□□□□ -0.54
RNF43-207ENST00000583753 CHMP2AO43633 222 aa11.64□□□□□ -0.55
RNF43-207ENST00000583753 GJC1P36383 396 aa11.64□□□□□ -0.55
RNF43-207ENST00000583753 WDR93Q6P2C0 686 aa11.64□□□□□ -0.55
RNF43-207ENST00000583753 LARP4BQ92615 738 aaKnown RBP11.64□□□□□ -0.55
RNF43-207ENST00000583753 EYA3Q99504 573 aa11.64□□□□□ -0.55
RNF43-207ENST00000583753 CCDC87Q9NVE4 849 aa11.64□□□□□ -0.55
RNF43-207ENST00000583753 STK38LQ9Y2H1 464 aa11.64□□□□□ -0.55
RNF43-207ENST00000583753 RGPD8O14715 1765 aaPredicted RBP11.64□□□□□ -0.55
RNF43-207ENST00000583753 RIMBP2O15034 1052 aa11.64□□□□□ -0.55
RNF43-207ENST00000583753 FAM153BP0C7A2 387 aa11.64□□□□□ -0.55
RNF43-207ENST00000583753 KLRK1P26718 216 aa11.64□□□□□ -0.55
RNF43-207ENST00000583753 MAN2A1Q16706 1144 aa11.64□□□□□ -0.55
RNF43-207ENST00000583753 FAM153CQ494X1 144 aa11.64□□□□□ -0.55
RNF43-207ENST00000583753 TBC1D10BQ4KMP7 808 aaPredicted RBP11.64□□□□□ -0.55
RNF43-207ENST00000583753 PDXDC2PQ6P474 469 aa11.64□□□□□ -0.55
RNF43-207ENST00000583753 WDR59Q6PJI9 974 aa11.64□□□□□ -0.55
RNF43-207ENST00000583753 ITIH6Q6UXX5 1313 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms