RNA–Protein interactions for RNA: ENST00000581497.1

SRSF1-203, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-203ENST00000581497 LCORLQ8N3X6 602 aa9.42□□□□□ -0.9
SRSF1-203ENST00000581497 EDC3Q96F86 508 aaKnown RBP9.42□□□□□ -0.9
SRSF1-203ENST00000581497 KIAA1683Q9H0B3 1180 aa9.42□□□□□ -0.9
SRSF1-203ENST00000581497 DCP1AQ9NPI6 582 aaPredicted RBP9.42□□□□□ -0.9
SRSF1-203ENST00000581497 ATP8A2Q9NTI2 1148 aa9.42□□□□□ -0.9
SRSF1-203ENST00000581497 GJD2Q9UKL4 321 aa9.42□□□□□ -0.9
SRSF1-203ENST00000581497 PRR12Q9ULL5 1215 aa9.42□□□□□ -0.9
SRSF1-203ENST00000581497 ZSWIM8A7E2V4 1837 aa9.42□□□□□ -0.9
SRSF1-203ENST00000581497 RBBP6Q7Z6E9 1792 aaKnown RBP9.42□□□□□ -0.9
SRSF1-203ENST00000581497 TNRC18O15417 2968 aaPredicted RBP9.41□□□□□ -0.9
SRSF1-203ENST00000581497 PHIPQ8WWQ0 1821 aa9.41□□□□□ -0.9
SRSF1-203ENST00000581497 MBD4O95243 580 aa9.41□□□□□ -0.9
SRSF1-203ENST00000581497 TFRCP02786 760 aaKnown RBP9.41□□□□□ -0.9
SRSF1-203ENST00000581497 HMGCRP04035 888 aa9.41□□□□□ -0.9
SRSF1-203ENST00000581497 FAM157BP0CG42 384 aa9.41□□□□□ -0.9
SRSF1-203ENST00000581497 ERVK-24P63145 666 aa9.41□□□□□ -0.9
SRSF1-203ENST00000581497 UBE3CQ15386 1083 aa9.41□□□□□ -0.9
SRSF1-203ENST00000581497 RSPO4Q2I0M5 234 aaPredicted RBP9.41□□□□□ -0.9
SRSF1-203ENST00000581497 AMOTL1Q8IY63 956 aa9.41□□□□□ -0.9
SRSF1-203ENST00000581497 SDR42E1Q8WUS8 393 aa9.41□□□□□ -0.9
SRSF1-203ENST00000581497 SOCS4Q8WXH5 440 aa9.41□□□□□ -0.9
SRSF1-203ENST00000581497 PAGR1Q9BTK6 254 aa9.41□□□□□ -0.9
SRSF1-203ENST00000581497 HTATIP2Q9BUP3 242 aa9.41□□□□□ -0.9
SRSF1-203ENST00000581497 ARMT1Q9H993 441 aa9.41□□□□□ -0.9
SRSF1-203ENST00000581497 TXNRD2Q9NNW7 524 aa9.41□□□□□ -0.9
SRSF1-203ENST00000581497 PAK6Q9NQU5 681 aaPredicted RBP9.41□□□□□ -0.9
SRSF1-203ENST00000581497 RBPJLQ9UBG7 517 aa9.41□□□□□ -0.9
SRSF1-203ENST00000581497 SWAP70Q9UH65 585 aa9.41□□□□□ -0.9
SRSF1-203ENST00000581497 RABGAP1Q9Y3P9 1069 aa9.41□□□□□ -0.9
SRSF1-203ENST00000581497 MPHOSPH10O00566 681 aaKnown RBP9.4□□□□□ -0.9
SRSF1-203ENST00000581497 SMARCA5O60264 1052 aaPredicted RBP9.4□□□□□ -0.9
SRSF1-203ENST00000581497 FARP2O94887 1054 aaPredicted RBP9.4□□□□□ -0.9
SRSF1-203ENST00000581497 XRCC5P13010 732 aaKnown RBP9.4□□□□□ -0.9
SRSF1-203ENST00000581497 CCNA1P78396 465 aa9.4□□□□□ -0.9
SRSF1-203ENST00000581497 SEPT2Q15019 361 aa9.4□□□□□ -0.9
SRSF1-203ENST00000581497 HABP4Q5JVS0 413 aaKnown RBP9.4□□□□□ -0.9
SRSF1-203ENST00000581497 CATSPERGQ6ZRH7 1159 aa9.4□□□□□ -0.9
SRSF1-203ENST00000581497 UBE2Q1Q7Z7E8 422 aa9.4□□□□□ -0.9
SRSF1-203ENST00000581497 ACER1Q8TDN7 264 aa9.4□□□□□ -0.9
SRSF1-203ENST00000581497 DPF3Q92784 378 aa9.4□□□□□ -0.9
SRSF1-203ENST00000581497 GPATCH3Q96I76 525 aa9.4□□□□□ -0.9
SRSF1-203ENST00000581497 DEFB118Q96PH6 123 aa9.4□□□□□ -0.9
SRSF1-203ENST00000581497 CWC22Q9HCG8 908 aaKnown RBP9.4□□□□□ -0.9
SRSF1-203ENST00000581497 ECHDC1Q9NTX5 307 aa9.4□□□□□ -0.9
SRSF1-203ENST00000581497 LOC285556D6RIA3 1793 aa9.4□□□□□ -0.91
SRSF1-203ENST00000581497 PTPRFP10586 1907 aa9.39□□□□□ -0.91
SRSF1-203ENST00000581497 RPTORQ8N122 1335 aa9.39□□□□□ -0.91
SRSF1-203ENST00000581497 SCO2A0A1W2PP80 73 aa9.39□□□□□ -0.91
SRSF1-203ENST00000581497 SPDYE3A6NKU9 549 aa9.39□□□□□ -0.91
SRSF1-203ENST00000581497 PRKAB2O43741 272 aa9.39□□□□□ -0.91
SRSF1-203ENST00000581497 PEX10O60683 326 aa9.39□□□□□ -0.91
SRSF1-203ENST00000581497 GLRX3O76003 335 aaKnown RBP9.39□□□□□ -0.91
SRSF1-203ENST00000581497 VCAM1P19320 739 aa9.39□□□□□ -0.91
SRSF1-203ENST00000581497 CYP2B6P20813 491 aa9.39□□□□□ -0.91
SRSF1-203ENST00000581497 GUCY1A2P33402 732 aa9.39□□□□□ -0.91
SRSF1-203ENST00000581497 LBX2Q6XYB7 198 aa9.39□□□□□ -0.91
SRSF1-203ENST00000581497 TMEM179Q6ZVK1 233 aa9.39□□□□□ -0.91
SRSF1-203ENST00000581497 GPR142Q7Z601 462 aa9.39□□□□□ -0.91
SRSF1-203ENST00000581497 PLEKHH3Q7Z736 793 aa9.39□□□□□ -0.91
SRSF1-203ENST00000581497 ZNF295-AS1Q8N0V1 137 aa9.39□□□□□ -0.91
SRSF1-203ENST00000581497 CCDC17Q96LX7 622 aa9.39□□□□□ -0.91
SRSF1-203ENST00000581497 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.39□□□□□ -0.91
SRSF1-203ENST00000581497 PORCNQ9H237 461 aa9.39□□□□□ -0.91
SRSF1-203ENST00000581497 RPAP3Q9H6T3 665 aaPredicted RBP9.39□□□□□ -0.91
SRSF1-203ENST00000581497 DCTPP1Q9H773 170 aa9.39□□□□□ -0.91
SRSF1-203ENST00000581497 ZDHHC3Q9NYG2 299 aa9.39□□□□□ -0.91
SRSF1-203ENST00000581497 SIPA1L1O43166 1804 aa9.39□□□□□ -0.91
SRSF1-203ENST00000581497 USP17L12C9JPN9 530 aa9.38□□□□□ -0.91
SRSF1-203ENST00000581497 USP17L21D6R901 530 aa9.38□□□□□ -0.91
SRSF1-203ENST00000581497 H0YGN5 161 aa9.38□□□□□ -0.91
SRSF1-203ENST00000581497 CYP2D6P10635 497 aa9.38□□□□□ -0.91
SRSF1-203ENST00000581497 ZKSCAN1P17029 563 aaPredicted RBP9.38□□□□□ -0.91
SRSF1-203ENST00000581497 RGS2P41220 211 aa9.38□□□□□ -0.91
SRSF1-203ENST00000581497 NKAPLQ5M9Q1 402 aa9.38□□□□□ -0.91
SRSF1-203ENST00000581497 C12orf60Q5U649 245 aa9.38□□□□□ -0.91
SRSF1-203ENST00000581497 SLC44A5Q8NCS7 719 aa9.38□□□□□ -0.91
SRSF1-203ENST00000581497 TRIB2Q92519 343 aa9.38□□□□□ -0.91
SRSF1-203ENST00000581497 DYNLL2Q96FJ2 89 aa9.38□□□□□ -0.91
SRSF1-203ENST00000581497 SH2D4AQ9H788 454 aa9.38□□□□□ -0.91
SRSF1-203ENST00000581497 HOXC10Q9NYD6 342 aa9.38□□□□□ -0.91
SRSF1-203ENST00000581497 MARK1Q9P0L2 795 aa9.38□□□□□ -0.91
SRSF1-203ENST00000581497 SERTAD1Q9UHV2 236 aa9.38□□□□□ -0.91
SRSF1-203ENST00000581497 NR2E3Q9Y5X4 410 aa9.38□□□□□ -0.91
SRSF1-203ENST00000581497 SLC4A4Q9Y6R1 1079 aa9.38□□□□□ -0.91
SRSF1-203ENST00000581497 IVNS1ABPQ9Y6Y0 642 aa9.38□□□□□ -0.91
SRSF1-203ENST00000581497 ELOA3CA0A087WX78 387 aaPredicted RBP9.37□□□□□ -0.91
SRSF1-203ENST00000581497 A0A1W2PRG0 241 aa9.37□□□□□ -0.91
SRSF1-203ENST00000581497 ELOA3DA6NLF2 546 aaPredicted RBP9.37□□□□□ -0.91
SRSF1-203ENST00000581497 CNMDO75829 334 aa9.37□□□□□ -0.91
SRSF1-203ENST00000581497 CDK8P49336 464 aa9.37□□□□□ -0.91
SRSF1-203ENST00000581497 ICA1Q05084 483 aa9.37□□□□□ -0.91
SRSF1-203ENST00000581497 COG2Q14746 738 aa9.37□□□□□ -0.91
SRSF1-203ENST00000581497 LRRFIP1Q32MZ4 808 aaKnown RBP9.37□□□□□ -0.91
SRSF1-203ENST00000581497 ELOA3BQ3SY89 546 aa9.37□□□□□ -0.91
SRSF1-203ENST00000581497 FOXD4L6Q3SYB3 417 aaPredicted RBP9.37□□□□□ -0.91
SRSF1-203ENST00000581497 PRRT3Q5FWE3 981 aa9.37□□□□□ -0.91
SRSF1-203ENST00000581497 SAMD5Q5TGI4 173 aa9.37□□□□□ -0.91
SRSF1-203ENST00000581497 WDR78Q5VTH9 848 aa9.37□□□□□ -0.91
SRSF1-203ENST00000581497 FOXD4L3Q6VB84 417 aaPredicted RBP9.37□□□□□ -0.91
SRSF1-203ENST00000581497 C16orf86Q6ZW13 317 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms