RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 CYP2C19P33261 490 aa15.15■□□□□ 0.02
NDEL1-204ENST00000578172 EHHADHQ08426 723 aa15.15■□□□□ 0.02
NDEL1-204ENST00000578172 NT5DC1Q5TFE4 455 aa15.15■□□□□ 0.02
NDEL1-204ENST00000578172 FNBP4Q8N3X1 1017 aaPredicted RBP15.15■□□□□ 0.02
NDEL1-204ENST00000578172 ZC3H12CQ9C0D7 883 aaKnown RBP15.15■□□□□ 0.02
NDEL1-204ENST00000578172 USP40Q9NVE5 1235 aa15.15■□□□□ 0.02
NDEL1-204ENST00000578172 PCDHB13Q9Y5F0 798 aa15.15■□□□□ 0.02
NDEL1-204ENST00000578172 FAM237AA0A1B0GTK4 181 aa15.15■□□□□ 0.02
NDEL1-204ENST00000578172 MYMKA6NI61 221 aa15.15■□□□□ 0.02
NDEL1-204ENST00000578172 STXBP3O00186 592 aa15.15■□□□□ 0.02
NDEL1-204ENST00000578172 CLIC2O15247 247 aa15.15■□□□□ 0.02
NDEL1-204ENST00000578172 HERVK_113P62684 666 aa15.15■□□□□ 0.02
NDEL1-204ENST00000578172 IRX5P78411 483 aaPredicted RBP15.15■□□□□ 0.02
NDEL1-204ENST00000578172 PRR16Q569H4 304 aa15.15■□□□□ 0.02
NDEL1-204ENST00000578172 KRT25Q7Z3Z0 450 aa15.15■□□□□ 0.02
NDEL1-204ENST00000578172 MICALL1Q8N3F8 863 aa15.15■□□□□ 0.02
NDEL1-204ENST00000578172 LARP4BQ92615 738 aaKnown RBP15.15■□□□□ 0.02
NDEL1-204ENST00000578172 DDX12PQ92771 950 aa15.15■□□□□ 0.02
NDEL1-204ENST00000578172 HOXA13P31271 388 aaPredicted RBP15.15■□□□□ 0.02
NDEL1-204ENST00000578172 GSTO1P78417 241 aa15.15■□□□□ 0.02
NDEL1-204ENST00000578172 MKRN4PQ13434 485 aaPredicted RBP15.15■□□□□ 0.02
NDEL1-204ENST00000578172 CNNM4Q6P4Q7 775 aa15.15■□□□□ 0.02
NDEL1-204ENST00000578172 RSRC2Q7L4I2 434 aaKnown RBP15.15■□□□□ 0.02
NDEL1-204ENST00000578172 IRF2BP1Q8IU81 584 aa15.15■□□□□ 0.02
NDEL1-204ENST00000578172 KSR1Q8IVT5 923 aa15.15■□□□□ 0.02
NDEL1-204ENST00000578172 SH2D3AQ9BRG2 576 aa15.15■□□□□ 0.02
NDEL1-204ENST00000578172 HAUS4Q9H6D7 363 aa15.15■□□□□ 0.02
NDEL1-204ENST00000578172 LIMA1Q9UHB6 759 aaKnown RBP15.15■□□□□ 0.02
NDEL1-204ENST00000578172 LCMT1Q9UIC8 334 aa15.15■□□□□ 0.02
NDEL1-204ENST00000578172 SAMM50Q9Y512 469 aa15.15■□□□□ 0.02
NDEL1-204ENST00000578172 CAPN6Q9Y6Q1 641 aa15.15■□□□□ 0.02
NDEL1-204ENST00000578172 UTRNP46939 3433 aa15.15■□□□□ 0.02
NDEL1-204ENST00000578172 USP17L10C9JJH3 530 aa15.14■□□□□ 0.01
NDEL1-204ENST00000578172 CCNE1P24864 410 aa15.14■□□□□ 0.01
NDEL1-204ENST00000578172 FAM114A1Q8IWE2 563 aa15.14■□□□□ 0.01
NDEL1-204ENST00000578172 LRRC15Q8TF66 581 aa15.14■□□□□ 0.01
NDEL1-204ENST00000578172 CD209Q9NNX6 404 aa15.14■□□□□ 0.01
NDEL1-204ENST00000578172 BARHL2Q9NY43 387 aa15.14■□□□□ 0.01
NDEL1-204ENST00000578172 ADAMTS1Q9UHI8 967 aa15.14■□□□□ 0.01
NDEL1-204ENST00000578172 REXO2Q9Y3B8 237 aaKnown RBP15.14■□□□□ 0.01
NDEL1-204ENST00000578172 ARHGAP25P42331 645 aa15.14■□□□□ 0.01
NDEL1-204ENST00000578172 KCNJ6P48051 423 aa15.14■□□□□ 0.01
NDEL1-204ENST00000578172 SH3RF1Q7Z6J0 888 aa15.14■□□□□ 0.01
NDEL1-204ENST00000578172 FAM133AQ8N9E0 248 aa15.14■□□□□ 0.01
NDEL1-204ENST00000578172 ALS2CR12Q96Q35 445 aa15.14■□□□□ 0.01
NDEL1-204ENST00000578172 EHD4Q9H223 541 aa15.14■□□□□ 0.01
NDEL1-204ENST00000578172 PCDHA12Q9UN75 941 aa15.14■□□□□ 0.01
NDEL1-204ENST00000578172 SPATA31A1Q5TZJ5 1347 aa15.14■□□□□ 0.01
NDEL1-204ENST00000578172 RDXP35241 583 aaKnown RBP15.14■□□□□ 0.01
NDEL1-204ENST00000578172 KIF11P52732 1056 aa15.14■□□□□ 0.01
NDEL1-204ENST00000578172 SF3B3Q15393 1217 aaKnown RBP15.14■□□□□ 0.01
NDEL1-204ENST00000578172 SLC35G1Q2M3R5 365 aa15.14■□□□□ 0.01
NDEL1-204ENST00000578172 RAB34Q9BZG1 259 aa15.14■□□□□ 0.01
NDEL1-204ENST00000578172 NDST4Q9H3R1 872 aa15.14■□□□□ 0.01
NDEL1-204ENST00000578172 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.14■□□□□ 0.01
NDEL1-204ENST00000578172 POTEB3A0JP26 581 aa15.13■□□□□ 0.01
NDEL1-204ENST00000578172 TMEM110-MUSTN1A8MSY1 372 aa15.13■□□□□ 0.01
NDEL1-204ENST00000578172 POTECB2RU33 542 aa15.13■□□□□ 0.01
NDEL1-204ENST00000578172 WHAMMP3Q1A5X7 153 aa15.13■□□□□ 0.01
NDEL1-204ENST00000578172 ODF2Q5BJF6 829 aa15.13■□□□□ 0.01
NDEL1-204ENST00000578172 BEND6Q5SZJ8 279 aaPredicted RBP15.13■□□□□ 0.01
NDEL1-204ENST00000578172 POTEBQ6S5H4 581 aa15.13■□□□□ 0.01
NDEL1-204ENST00000578172 GPBP1Q86WP2 473 aa15.13■□□□□ 0.01
NDEL1-204ENST00000578172 PYM1Q9BRP8 204 aaKnown RBP15.13■□□□□ 0.01
NDEL1-204ENST00000578172 ORC4O43929 436 aa15.13■□□□□ 0.01
NDEL1-204ENST00000578172 GGCXP38435 758 aa15.13■□□□□ 0.01
NDEL1-204ENST00000578172 KCNK18Q7Z418 384 aa15.13■□□□□ 0.01
NDEL1-204ENST00000578172 CCDC51Q96ER9 411 aa15.13■□□□□ 0.01
NDEL1-204ENST00000578172 ANAPC4Q9UJX5 808 aa15.13■□□□□ 0.01
NDEL1-204ENST00000578172 ZSCAN5CA6NGD5 496 aaPredicted RBP15.13■□□□□ 0.01
NDEL1-204ENST00000578172 POTEB2H3BUK9 544 aa15.13■□□□□ 0.01
NDEL1-204ENST00000578172 TRAPPC10P48553 1259 aa15.13■□□□□ 0.01
NDEL1-204ENST00000578172 MAP9Q49MG5 647 aa15.13■□□□□ 0.01
NDEL1-204ENST00000578172 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.13■□□□□ 0.01
NDEL1-204ENST00000578172 DGKHQ86XP1 1220 aa15.13■□□□□ 0.01
NDEL1-204ENST00000578172 TBC1D5Q92609 795 aa15.13■□□□□ 0.01
NDEL1-204ENST00000578172 LRRC1Q9BTT6 524 aa15.13■□□□□ 0.01
NDEL1-204ENST00000578172 DDX25Q9UHL0 483 aaKnown RBP15.13■□□□□ 0.01
NDEL1-204ENST00000578172 TAF1P21675 1872 aa15.13■□□□□ 0.01
NDEL1-204ENST00000578172 COL1A1P02452 1464 aaPredicted RBP15.13■□□□□ 0.01
NDEL1-204ENST00000578172 PDE2AO00408 941 aaPredicted RBP15.12■□□□□ 0.01
NDEL1-204ENST00000578172 MYBL2P10244 700 aa15.12■□□□□ 0.01
NDEL1-204ENST00000578172 ABCB4P21439 1286 aa15.12■□□□□ 0.01
NDEL1-204ENST00000578172 GRM4Q14833 912 aa15.12■□□□□ 0.01
NDEL1-204ENST00000578172 AFAP1L1Q8TED9 768 aa15.12■□□□□ 0.01
NDEL1-204ENST00000578172 PCDHAC2Q9Y5I4 1007 aa15.12■□□□□ 0.01
NDEL1-204ENST00000578172 NWD2Q9ULI1 1742 aa15.12■□□□□ 0.01
NDEL1-204ENST00000578172 GOLGA6BA6NDN3 693 aa15.12■□□□□ 0.01
NDEL1-204ENST00000578172 ACTN1P12814 892 aa15.12■□□□□ 0.01
NDEL1-204ENST00000578172 SLC1A4P43007 532 aa15.12■□□□□ 0.01
NDEL1-204ENST00000578172 TRIM14Q14142 442 aa15.12■□□□□ 0.01
NDEL1-204ENST00000578172 C8orf74Q6P047 294 aa15.12■□□□□ 0.01
NDEL1-204ENST00000578172 TICAM2Q86XR7 235 aa15.12■□□□□ 0.01
NDEL1-204ENST00000578172 SH2D3CQ8N5H7 860 aa15.12■□□□□ 0.01
NDEL1-204ENST00000578172 UHMK1Q8TAS1 419 aaKnown RBP15.12■□□□□ 0.01
NDEL1-204ENST00000578172 GOPCQ9HD26 462 aa15.12■□□□□ 0.01
NDEL1-204ENST00000578172 NARFQ9UHQ1 456 aa15.12■□□□□ 0.01
NDEL1-204ENST00000578172 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.12■□□□□ 0.01
NDEL1-204ENST00000578172 TAF4BQ92750 862 aa15.12■□□□□ 0.01
NDEL1-204ENST00000578172 TNFRSF25Q93038 417 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms