RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 TSPYL2Q9H2G4 693 aaPredicted RBP11.69□□□□□ -0.54
SEC22B-201ENST00000578049 ZNF219Q9P2Y4 722 aaPredicted RBP11.69□□□□□ -0.54
SEC22B-201ENST00000578049 EPS15L1Q9UBC2 864 aa11.69□□□□□ -0.54
SEC22B-201ENST00000578049 MRPL11Q9Y3B7 192 aaKnown RBP11.69□□□□□ -0.54
SEC22B-201ENST00000578049 MIF4GDA9UHW6 222 aaKnown RBP11.69□□□□□ -0.54
SEC22B-201ENST00000578049 RASGRF2O14827 1237 aa11.69□□□□□ -0.54
SEC22B-201ENST00000578049 COG7P83436 770 aa11.69□□□□□ -0.54
SEC22B-201ENST00000578049 TRAPPC3LQ5T215 181 aa11.69□□□□□ -0.54
SEC22B-201ENST00000578049 FMO2Q99518 471 aa11.69□□□□□ -0.54
SEC22B-201ENST00000578049 SLC39A2Q9NP94 309 aa11.69□□□□□ -0.54
SEC22B-201ENST00000578049 PRPF3O43395 683 aaKnown RBP11.69□□□□□ -0.54
SEC22B-201ENST00000578049 HARSP12081 509 aaKnown RBP11.69□□□□□ -0.54
SEC22B-201ENST00000578049 PSMC2P35998 433 aaKnown RBP11.69□□□□□ -0.54
SEC22B-201ENST00000578049 ASPRV1Q53RT3 343 aa11.69□□□□□ -0.54
SEC22B-201ENST00000578049 HIBCHQ6NVY1 386 aaPredicted RBP11.69□□□□□ -0.54
SEC22B-201ENST00000578049 PAXIP1Q6ZW49 1069 aaPredicted RBP11.69□□□□□ -0.54
SEC22B-201ENST00000578049 NT5C1BQ96P26 610 aa11.69□□□□□ -0.54
SEC22B-201ENST00000578049 ZNF277Q9NRM2 450 aaPredicted RBP11.69□□□□□ -0.54
SEC22B-201ENST00000578049 LCMT1Q9UIC8 334 aa11.69□□□□□ -0.54
SEC22B-201ENST00000578049 IGSF1Q8N6C5 1336 aa11.68□□□□□ -0.54
SEC22B-201ENST00000578049 STK36Q9NRP7 1315 aa11.68□□□□□ -0.54
SEC22B-201ENST00000578049 KRT3P12035 628 aa11.68□□□□□ -0.54
SEC22B-201ENST00000578049 GNPTABQ3T906 1256 aa11.68□□□□□ -0.54
SEC22B-201ENST00000578049 RHOT2Q8IXI1 618 aa11.68□□□□□ -0.54
SEC22B-201ENST00000578049 FAM96AQ9H5X1 160 aa11.68□□□□□ -0.54
SEC22B-201ENST00000578049 STAM2O75886 525 aa11.68□□□□□ -0.54
SEC22B-201ENST00000578049 TMTC3Q6ZXV5 915 aa11.68□□□□□ -0.54
SEC22B-201ENST00000578049 ZC3H15Q8WU90 426 aaKnown RBP11.68□□□□□ -0.54
SEC22B-201ENST00000578049 SDCCAG3Q96C92 435 aa11.68□□□□□ -0.54
SEC22B-201ENST00000578049 BIN2Q9UBW5 565 aaPredicted RBP11.68□□□□□ -0.54
SEC22B-201ENST00000578049 DDX25Q9UHL0 483 aaKnown RBP11.68□□□□□ -0.54
SEC22B-201ENST00000578049 BAG2O95816 211 aa11.68□□□□□ -0.54
SEC22B-201ENST00000578049 CYP2J2P51589 502 aa11.68□□□□□ -0.54
SEC22B-201ENST00000578049 DRP2Q13474 957 aa11.68□□□□□ -0.54
SEC22B-201ENST00000578049 UNC5CLQ8IV45 518 aa11.68□□□□□ -0.54
SEC22B-201ENST00000578049 TPH2Q8IWU9 490 aa11.68□□□□□ -0.54
SEC22B-201ENST00000578049 PARP3Q9Y6F1 533 aa11.68□□□□□ -0.54
SEC22B-201ENST00000578049 NDUFB9Q9Y6M9 179 aa11.68□□□□□ -0.54
SEC22B-201ENST00000578049 ENC1O14682 589 aa11.68□□□□□ -0.54
SEC22B-201ENST00000578049 PFDN6O15212 129 aa11.68□□□□□ -0.54
SEC22B-201ENST00000578049 NR2F2P24468 414 aa11.68□□□□□ -0.54
SEC22B-201ENST00000578049 ALCAMQ13740 583 aa11.68□□□□□ -0.54
SEC22B-201ENST00000578049 RNF34Q969K3 372 aa11.68□□□□□ -0.54
SEC22B-201ENST00000578049 DISP1Q96F81 1524 aa11.68□□□□□ -0.54
SEC22B-201ENST00000578049 DCTN3O75935 186 aa11.68□□□□□ -0.54
SEC22B-201ENST00000578049 HSPA8P11142 646 aaKnown RBP11.68□□□□□ -0.54
SEC22B-201ENST00000578049 ORC2Q13416 577 aaPredicted RBP11.68□□□□□ -0.54
SEC22B-201ENST00000578049 SUPT20HQ8NEM7 779 aa11.68□□□□□ -0.54
SEC22B-201ENST00000578049 NHEJ1Q9H9Q4 299 aaPredicted RBP11.68□□□□□ -0.54
SEC22B-201ENST00000578049 MRPL47Q9HD33 250 aaKnown RBP11.68□□□□□ -0.54
SEC22B-201ENST00000578049 RINT1Q6NUQ1 792 aa11.67□□□□□ -0.54
SEC22B-201ENST00000578049 ANKRD13CQ8N6S4 541 aa11.67□□□□□ -0.54
SEC22B-201ENST00000578049 PDCD7Q8N8D1 485 aaKnown RBP11.67□□□□□ -0.54
SEC22B-201ENST00000578049 GSDMBQ8TAX9 411 aa11.67□□□□□ -0.54
SEC22B-201ENST00000578049 DEPTORQ8TB45 409 aa11.67□□□□□ -0.54
SEC22B-201ENST00000578049 DDX27Q96GQ7 796 aaKnown RBP11.67□□□□□ -0.54
SEC22B-201ENST00000578049 SH2B2O14492 632 aaPredicted RBP11.67□□□□□ -0.54
SEC22B-201ENST00000578049 KPNA2P52292 529 aaKnown RBP11.67□□□□□ -0.54
SEC22B-201ENST00000578049 SCYL3Q8IZE3 742 aa11.67□□□□□ -0.54
SEC22B-201ENST00000578049 TTC4O95801 387 aa11.67□□□□□ -0.54
SEC22B-201ENST00000578049 TAF11Q15544 211 aa11.67□□□□□ -0.54
SEC22B-201ENST00000578049 DNAJC10Q8IXB1 793 aa11.67□□□□□ -0.54
SEC22B-201ENST00000578049 EDEM3Q9BZQ6 932 aa11.67□□□□□ -0.54
SEC22B-201ENST00000578049 CDK12Q9NYV4 1490 aaPredicted RBP11.67□□□□□ -0.54
SEC22B-201ENST00000578049 TARSL2A2RTX5 802 aaKnown RBP11.67□□□□□ -0.54
SEC22B-201ENST00000578049 CFBP00751 764 aa11.67□□□□□ -0.54
SEC22B-201ENST00000578049 MAPKAPK5Q8IW41 473 aa11.67□□□□□ -0.54
SEC22B-201ENST00000578049 ZBTB8OSQ8IWT0 167 aa11.67□□□□□ -0.54
SEC22B-201ENST00000578049 TEKT3Q9BXF9 490 aa11.67□□□□□ -0.54
SEC22B-201ENST00000578049 VIPAS39Q9H9C1 493 aa11.67□□□□□ -0.54
SEC22B-201ENST00000578049 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.67□□□□□ -0.54
SEC22B-201ENST00000578049 REREQ9P2R6 1566 aa11.67□□□□□ -0.54
SEC22B-201ENST00000578049 PTPREP23469 700 aa11.67□□□□□ -0.54
SEC22B-201ENST00000578049 PEX19P40855 299 aa11.67□□□□□ -0.54
SEC22B-201ENST00000578049 ARMCX5Q6P1M9 558 aa11.67□□□□□ -0.54
SEC22B-201ENST00000578049 MCF2L2Q86YR7 1114 aa11.67□□□□□ -0.54
SEC22B-201ENST00000578049 ATP8A1Q9Y2Q0 1164 aa11.67□□□□□ -0.54
SEC22B-201ENST00000578049 KIF1CO43896 1103 aaKnown RBP11.66□□□□□ -0.54
SEC22B-201ENST00000578049 SH3BP5O60239 455 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 IFNAR2P48551 515 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 MYL7Q01449 175 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 CAV1Q03135 178 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 RESP18Q5W5W9 173 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 NDST4Q9H3R1 872 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 MAPK13O15264 365 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 PLTPP55058 493 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 KRT81Q14533 505 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 PROM2Q8N271 834 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 PPM1KQ8N3J5 372 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 ACRBPQ8NEB7 543 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 WDR11Q9BZH6 1224 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 TMEM206Q9H813 350 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 SOWAHDA6NJG2 315 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 PFDN1O60925 122 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 TNNC2P02585 160 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 EIF4A3P38919 411 aaKnown RBP11.66□□□□□ -0.54
SEC22B-201ENST00000578049 FAM47AQ5JRC9 791 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 HACE1Q8IYU2 909 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 ACSBG1Q96GR2 724 aa11.66□□□□□ -0.54
SEC22B-201ENST00000578049 JPH2Q9BR39 696 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 325.8 ms