RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 CMA1P23946 247 aa34.7■■■■□ 3.14
CTCF-203ENST00000566078 YY1P25490 414 aa34.7■■■■□ 3.14
CTCF-203ENST00000566078 SHC4Q6S5L8 630 aa34.7■■■■□ 3.14
CTCF-203ENST00000566078 FAM43AQ8N2R8 423 aa34.7■■■■□ 3.14
CTCF-203ENST00000566078 TXNRD2Q9NNW7 524 aa34.7■■■■□ 3.14
CTCF-203ENST00000566078 RBPJLQ9UBG7 517 aa34.7■■■■□ 3.14
CTCF-203ENST00000566078 DDX25Q9UHL0 483 aaKnown RBP34.7■■■■□ 3.14
CTCF-203ENST00000566078 RABGAP1Q9Y3P9 1069 aa34.7■■■■□ 3.14
CTCF-203ENST00000566078 ZNFX1Q9P2E3 1918 aaKnown RBP34.69■■■■□ 3.14
CTCF-203ENST00000566078 A0A1B0GVL5 298 aa34.69■■■■□ 3.14
CTCF-203ENST00000566078 VWA3AA6NCI4 1184 aa34.69■■■■□ 3.14
CTCF-203ENST00000566078 OR52Z1P0C646 297 aa34.69■■■■□ 3.14
CTCF-203ENST00000566078 CHST13Q8NET6 341 aa34.69■■■■□ 3.14
CTCF-203ENST00000566078 SMCR8Q8TEV9 937 aaPredicted RBP34.69■■■■□ 3.14
CTCF-203ENST00000566078 GTF3C2Q8WUA4 911 aaPredicted RBP34.69■■■■□ 3.14
CTCF-203ENST00000566078 GZF1Q9H116 711 aaPredicted RBP34.69■■■■□ 3.14
CTCF-203ENST00000566078 CSRNP2Q9H175 543 aa34.69■■■■□ 3.14
CTCF-203ENST00000566078 RESP18Q5W5W9 173 aa34.68■■■■□ 3.14
CTCF-203ENST00000566078 MOXD1Q6UVY6 613 aa34.68■■■■□ 3.14
CTCF-203ENST00000566078 ZNF579Q8NAF0 562 aaKnown RBP34.68■■■■□ 3.14
CTCF-203ENST00000566078 PTPN18Q99952 460 aa34.68■■■■□ 3.14
CTCF-203ENST00000566078 TMEM63CQ9P1W3 806 aa34.68■■■■□ 3.14
CTCF-203ENST00000566078 UBXN2AP68543 259 aa34.67■■■■□ 3.14
CTCF-203ENST00000566078 CALCRLQ16602 461 aa34.67■■■■□ 3.14
CTCF-203ENST00000566078 SYAP1Q96A49 352 aaPredicted RBP34.67■■■■□ 3.14
CTCF-203ENST00000566078 PLXNB2O15031 1838 aa34.67■■■■□ 3.14
CTCF-203ENST00000566078 TESPA1A2RU30 521 aaPredicted RBP34.66■■■■□ 3.14
CTCF-203ENST00000566078 MANSC4A6NHS7 340 aaPredicted RBP34.66■■■■□ 3.14
CTCF-203ENST00000566078 NR1I2O75469 434 aa34.66■■■■□ 3.14
CTCF-203ENST00000566078 CYP3A4P08684 503 aa34.66■■■■□ 3.14
CTCF-203ENST00000566078 PRPHP41219 470 aa34.66■■■■□ 3.14
CTCF-203ENST00000566078 FSTL1Q12841 308 aa34.66■■■■□ 3.14
CTCF-203ENST00000566078 BAATQ14032 418 aaPredicted RBP34.66■■■■□ 3.14
CTCF-203ENST00000566078 IL17AQ16552 155 aa34.66■■■■□ 3.14
CTCF-203ENST00000566078 SPECC1Q5M775 1068 aa34.66■■■■□ 3.14
CTCF-203ENST00000566078 MOV10L1Q9BXT6 1211 aaKnown RBP34.66■■■■□ 3.14
CTCF-203ENST00000566078 FBXO40Q9UH90 709 aa34.66■■■■□ 3.14
CTCF-203ENST00000566078 RPTORQ8N122 1335 aa34.66■■■■□ 3.14
CTCF-203ENST00000566078 CYP3A7-CYP3A51PA0A087WV96 503 aa34.66■■■■□ 3.14
CTCF-203ENST00000566078 PFKFB1P16118 471 aa34.66■■■■□ 3.14
CTCF-203ENST00000566078 CYP3A7P24462 503 aa34.66■■■■□ 3.14
CTCF-203ENST00000566078 FAM160A1Q05DH4 1040 aa34.66■■■■□ 3.14
CTCF-203ENST00000566078 NCAPG2Q86XI2 1143 aa34.66■■■■□ 3.14
CTCF-203ENST00000566078 ZNF784Q8NCA9 323 aaPredicted RBP34.66■■■■□ 3.14
CTCF-203ENST00000566078 MBOAT7Q96N66 472 aa34.66■■■■□ 3.14
CTCF-203ENST00000566078 A1CFQ9NQ94 594 aaKnown RBP34.66■■■■□ 3.14
CTCF-203ENST00000566078 DACT1Q9NYF0 836 aa34.66■■■■□ 3.14
CTCF-203ENST00000566078 NDUFA8P51970 172 aa34.65■■■■□ 3.14
CTCF-203ENST00000566078 DTHD1Q6ZMT9 781 aa34.65■■■■□ 3.14
CTCF-203ENST00000566078 ZNF76P36508 570 aa34.64■■■■□ 3.14
CTCF-203ENST00000566078 TAAR1Q96RJ0 339 aa34.64■■■■□ 3.14
CTCF-203ENST00000566078 PARK7Q99497 189 aaKnown RBP34.64■■■■□ 3.14
CTCF-203ENST00000566078 MAF1Q9H063 256 aa34.64■■■■□ 3.14
CTCF-203ENST00000566078 CYP39A1Q9NYL5 469 aa34.64■■■■□ 3.14
CTCF-203ENST00000566078 FRMPD4Q14CM0 1322 aa34.64■■■■□ 3.14
CTCF-203ENST00000566078 SLC25A27O95847 323 aa34.63■■■■□ 3.13
CTCF-203ENST00000566078 CIITAP33076 1130 aa34.63■■■■□ 3.13
CTCF-203ENST00000566078 COPB2P35606 906 aa34.63■■■■□ 3.13
CTCF-203ENST00000566078 ERVK-9P63128 1117 aa34.63■■■■□ 3.13
CTCF-203ENST00000566078 ERVK-24P63145 666 aa34.63■■■■□ 3.13
CTCF-203ENST00000566078 ENGASEQ8NFI3 743 aa34.63■■■■□ 3.13
CTCF-203ENST00000566078 MTMR9Q96QG7 549 aa34.63■■■■□ 3.13
CTCF-203ENST00000566078 ANP32EQ9BTT0 268 aa34.63■■■■□ 3.13
CTCF-203ENST00000566078 FAM155AB1AL88 458 aaPredicted RBP34.63■■■■□ 3.13
CTCF-203ENST00000566078 Q3C1V9 767 aa34.63■■■■□ 3.13
CTCF-203ENST00000566078 CCDC183Q5T5S1 534 aa34.63■■■■□ 3.13
CTCF-203ENST00000566078 CCDC102AQ96A19 550 aa34.63■■■■□ 3.13
CTCF-203ENST00000566078 FAM13BQ9NYF5 915 aa34.63■■■■□ 3.13
CTCF-203ENST00000566078 KIAA1217Q5T5P2 1943 aa34.62■■■■□ 3.13
CTCF-203ENST00000566078 FAM86B1E9PN63 330 aa34.62■■■■□ 3.13
CTCF-203ENST00000566078 FAM86B2P0C5J1 330 aa34.62■■■■□ 3.13
CTCF-203ENST00000566078 ERCC3P19447 782 aa34.62■■■■□ 3.13
CTCF-203ENST00000566078 SNW1Q13573 536 aaKnown RBP34.62■■■■□ 3.13
CTCF-203ENST00000566078 Q4G0T1 1027 aa34.62■■■■□ 3.13
CTCF-203ENST00000566078 PRR16Q569H4 304 aa34.62■■■■□ 3.13
CTCF-203ENST00000566078 DDX19AQ9NUU7 478 aaKnown RBP34.62■■■■□ 3.13
CTCF-203ENST00000566078 HPSEQ9Y251 543 aa34.62■■■■□ 3.13
CTCF-203ENST00000566078 FAM237AA0A1B0GTK4 181 aa34.61■■■■□ 3.13
CTCF-203ENST00000566078 LONP1P36776 959 aaKnown RBP34.61■■■■□ 3.13
CTCF-203ENST00000566078 FMR1NBQ8N0W7 255 aaPredicted RBP34.61■■■■□ 3.13
CTCF-203ENST00000566078 ANKRD35Q8N283 1001 aa34.61■■■■□ 3.13
CTCF-203ENST00000566078 HHIPL1Q96JK4 782 aa34.61■■■■□ 3.13
CTCF-203ENST00000566078 PURBQ96QR8 312 aaKnown RBP34.61■■■■□ 3.13
CTCF-203ENST00000566078 RMDN3Q96TC7 470 aa34.61■■■■□ 3.13
CTCF-203ENST00000566078 PFASO15067 1338 aa34.6■■■■□ 3.13
CTCF-203ENST00000566078 EIF2AK2P19525 551 aaKnown RBP34.6■■■■□ 3.13
CTCF-203ENST00000566078 GCLCP48506 637 aaPredicted RBP34.6■■■■□ 3.13
CTCF-203ENST00000566078 PXMP2Q9NR77 195 aa34.6■■■■□ 3.13
CTCF-203ENST00000566078 PLXNA1Q9UIW2 1896 aa34.6■■■■□ 3.13
CTCF-203ENST00000566078 IGF2BP3O00425 579 aaKnown RBP eCLIP34.59■■■■□ 3.13
CTCF-203ENST00000566078 TXKP42681 527 aa34.59■■■■□ 3.13
CTCF-203ENST00000566078 IL31RAQ8NI17 732 aa34.59■■■■□ 3.13
CTCF-203ENST00000566078 SYMPKQ92797 1274 aaKnown RBP34.59■■■■□ 3.13
CTCF-203ENST00000566078 LENG9Q96B70 501 aa34.59■■■■□ 3.13
CTCF-203ENST00000566078 MARCH6O60337 910 aa34.59■■■■□ 3.13
CTCF-203ENST00000566078 ARHGEF16Q5VV41 709 aa34.59■■■■□ 3.13
CTCF-203ENST00000566078 USP49Q70CQ1 688 aa34.59■■■■□ 3.13
CTCF-203ENST00000566078 ANKRD13CQ8N6S4 541 aa34.59■■■■□ 3.13
CTCF-203ENST00000566078 GPRC5AQ8NFJ5 357 aa34.59■■■■□ 3.13
CTCF-203ENST00000566078 LRRC37A2A6NM11 1700 aa34.58■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms