RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 SMC3Q9UQE7 1217 aa16.23■□□□□ 0.19
SNX6-206ENST00000556162 ASTN1O14525 1302 aa16.23■□□□□ 0.19
SNX6-206ENST00000556162 SYNGAP1Q96PV0 1343 aa16.23■□□□□ 0.19
SNX6-206ENST00000556162 IGHA2P01877 340 aa16.22■□□□□ 0.19
SNX6-206ENST00000556162 INHAP05111 366 aa16.22■□□□□ 0.19
SNX6-206ENST00000556162 ARMCX2Q7L311 632 aa16.22■□□□□ 0.19
SNX6-206ENST00000556162 SHISA4Q96DD7 197 aa16.22■□□□□ 0.19
SNX6-206ENST00000556162 IWS1Q96ST2 819 aa16.22■□□□□ 0.19
SNX6-206ENST00000556162 PXMP2Q9NR77 195 aa16.22■□□□□ 0.19
SNX6-206ENST00000556162 CNPY2Q9Y2B0 182 aa16.22■□□□□ 0.19
SNX6-206ENST00000556162 FOSP01100 380 aaPredicted RBP16.22■□□□□ 0.19
SNX6-206ENST00000556162 EIF2AK2P19525 551 aaKnown RBP16.22■□□□□ 0.19
SNX6-206ENST00000556162 TRIM32Q13049 653 aa16.22■□□□□ 0.19
SNX6-206ENST00000556162 MCTP2Q6DN12 878 aa16.22■□□□□ 0.19
SNX6-206ENST00000556162 REXO1Q8N1G1 1221 aaKnown RBP16.22■□□□□ 0.19
SNX6-206ENST00000556162 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.22■□□□□ 0.19
SNX6-206ENST00000556162 PCDHA4Q9UN74 947 aa16.22■□□□□ 0.19
SNX6-206ENST00000556162 KCNJ14Q9UNX9 436 aa16.22■□□□□ 0.19
SNX6-206ENST00000556162 SNAI1O95863 264 aaPredicted RBP16.21■□□□□ 0.19
SNX6-206ENST00000556162 PRKAR2AP13861 404 aaKnown RBP16.21■□□□□ 0.19
SNX6-206ENST00000556162 CACNB2Q08289 660 aaPredicted RBP16.21■□□□□ 0.19
SNX6-206ENST00000556162 PDE4DQ08499 809 aa16.21■□□□□ 0.19
SNX6-206ENST00000556162 AP3B2Q13367 1082 aa16.21■□□□□ 0.19
SNX6-206ENST00000556162 PHF20Q9BVI0 1012 aa16.21■□□□□ 0.19
SNX6-206ENST00000556162 EHMT1Q9H9B1 1298 aa16.21■□□□□ 0.19
SNX6-206ENST00000556162 GJB4Q9NTQ9 266 aa16.21■□□□□ 0.19
SNX6-206ENST00000556162 PCDHA6Q9UN73 950 aa16.21■□□□□ 0.19
SNX6-206ENST00000556162 PCDHA8Q9Y5H6 950 aa16.21■□□□□ 0.19
SNX6-206ENST00000556162 NR3C2P08235 984 aa16.2■□□□□ 0.18
SNX6-206ENST00000556162 GJB2P29033 226 aa16.2■□□□□ 0.18
SNX6-206ENST00000556162 CLK2P49760 499 aaKnown RBP16.2■□□□□ 0.18
SNX6-206ENST00000556162 JAKMIP3Q5VZ66 844 aa16.2■□□□□ 0.18
SNX6-206ENST00000556162 BLIDQ8IZY5 108 aa16.2■□□□□ 0.18
SNX6-206ENST00000556162 MORC4Q8TE76 937 aa16.2■□□□□ 0.18
SNX6-206ENST00000556162 ARMC5Q96C12 935 aa16.2■□□□□ 0.18
SNX6-206ENST00000556162 INTS4Q96HW7 963 aaKnown RBP16.2■□□□□ 0.18
SNX6-206ENST00000556162 C8orf76Q96K31 380 aa16.2■□□□□ 0.18
SNX6-206ENST00000556162 PDCD2LQ9BRP1 358 aa16.2■□□□□ 0.18
SNX6-206ENST00000556162 ABHD16BQ9H3Z7 469 aa16.2■□□□□ 0.18
SNX6-206ENST00000556162 NRBP1Q9UHY1 535 aa16.2■□□□□ 0.18
SNX6-206ENST00000556162 PLXNA1Q9UIW2 1896 aa16.2■□□□□ 0.18
SNX6-206ENST00000556162 EDNRBP24530 442 aa16.2■□□□□ 0.18
SNX6-206ENST00000556162 FOSBP53539 338 aa16.2■□□□□ 0.18
SNX6-206ENST00000556162 STXBP2Q15833 593 aa16.2■□□□□ 0.18
SNX6-206ENST00000556162 PRAMEF19Q5SWL8 479 aa16.2■□□□□ 0.18
SNX6-206ENST00000556162 MAP3K21Q5TCX8 1036 aa16.2■□□□□ 0.18
SNX6-206ENST00000556162 DAGLBQ8NCG7 672 aa16.2■□□□□ 0.18
SNX6-206ENST00000556162 ZNF333Q96JL9 665 aa16.2■□□□□ 0.18
SNX6-206ENST00000556162 BRMS1Q9HCU9 246 aa16.2■□□□□ 0.18
SNX6-206ENST00000556162 HMX1Q9NP08 348 aaPredicted RBP16.2■□□□□ 0.18
SNX6-206ENST00000556162 TMEM260Q9NX78 707 aa16.2■□□□□ 0.18
SNX6-206ENST00000556162 DDX49Q9Y6V7 483 aaKnown RBP16.2■□□□□ 0.18
SNX6-206ENST00000556162 RPTORQ8N122 1335 aa16.19■□□□□ 0.18
SNX6-206ENST00000556162 RBBP6Q7Z6E9 1792 aaKnown RBP16.19■□□□□ 0.18
SNX6-206ENST00000556162 HSP90AA1P07900 732 aaKnown RBP16.19■□□□□ 0.18
SNX6-206ENST00000556162 MYCLP12524 364 aaPredicted RBP16.19■□□□□ 0.18
SNX6-206ENST00000556162 ACVR2BQ13705 512 aa16.19■□□□□ 0.18
SNX6-206ENST00000556162 PGM5Q15124 567 aa16.19■□□□□ 0.18
SNX6-206ENST00000556162 KRT40Q6A162 431 aa16.19■□□□□ 0.18
SNX6-206ENST00000556162 ADAMTS3O15072 1205 aa16.18■□□□□ 0.18
SNX6-206ENST00000556162 EIF3JO75822 258 aaKnown RBP16.18■□□□□ 0.18
SNX6-206ENST00000556162 MYCP01106 439 aaPredicted RBP16.18■□□□□ 0.18
SNX6-206ENST00000556162 CNGA1P29973 690 aa16.18■□□□□ 0.18
SNX6-206ENST00000556162 CCND2P30279 289 aa16.18■□□□□ 0.18
SNX6-206ENST00000556162 SAFBQ15424 915 aaKnown RBP eCLIP16.18■□□□□ 0.18
SNX6-206ENST00000556162 EEPD1Q7L9B9 569 aa16.18■□□□□ 0.18
SNX6-206ENST00000556162 VSIG10LQ86VR7 867 aa16.18■□□□□ 0.18
SNX6-206ENST00000556162 RASGRP4Q8TDF6 673 aa16.18■□□□□ 0.18
SNX6-206ENST00000556162 ANO3Q9BYT9 981 aa16.18■□□□□ 0.18
SNX6-206ENST00000556162 ZHX1Q9UKY1 873 aaPredicted RBP16.18■□□□□ 0.18
SNX6-206ENST00000556162 FRMPD4Q14CM0 1322 aa16.18■□□□□ 0.18
SNX6-206ENST00000556162 MMP1P03956 469 aa16.18■□□□□ 0.18
SNX6-206ENST00000556162 CYBAP13498 195 aa16.18■□□□□ 0.18
SNX6-206ENST00000556162 KRT2P35908 639 aa16.18■□□□□ 0.18
SNX6-206ENST00000556162 GUCY1B3Q02153 619 aa16.18■□□□□ 0.18
SNX6-206ENST00000556162 BECN1Q14457 450 aa16.18■□□□□ 0.18
SNX6-206ENST00000556162 NPY5RQ15761 445 aa16.18■□□□□ 0.18
SNX6-206ENST00000556162 TNS4Q8IZW8 715 aa16.18■□□□□ 0.18
SNX6-206ENST00000556162 FBXO18Q8NFZ0 1043 aa16.18■□□□□ 0.18
SNX6-206ENST00000556162 PGBD1Q96JS3 809 aa16.18■□□□□ 0.18
SNX6-206ENST00000556162 VTA1Q9NP79 307 aa16.18■□□□□ 0.18
SNX6-206ENST00000556162 ZNF865P0CJ78 1059 aaPredicted RBP16.17■□□□□ 0.18
SNX6-206ENST00000556162 CCL5P13501 91 aa16.17■□□□□ 0.18
SNX6-206ENST00000556162 MTFR1Q15390 333 aa16.17■□□□□ 0.18
SNX6-206ENST00000556162 XRRA1Q6P2D8 792 aa16.17■□□□□ 0.18
SNX6-206ENST00000556162 TRPV1Q8NER1 839 aa16.17■□□□□ 0.18
SNX6-206ENST00000556162 RNF208Q9H0X6 261 aa16.17■□□□□ 0.18
SNX6-206ENST00000556162 UNC93B1Q9H1C4 597 aa16.17■□□□□ 0.18
SNX6-206ENST00000556162 FOXD4L1Q9NU39 408 aa16.17■□□□□ 0.18
SNX6-206ENST00000556162 LCTP09848 1927 aa16.17■□□□□ 0.18
SNX6-206ENST00000556162 CCND3P30281 292 aaPredicted RBP16.16■□□□□ 0.18
SNX6-206ENST00000556162 PCNX4Q63HM2 1172 aa16.16■□□□□ 0.18
SNX6-206ENST00000556162 LARP1BQ659C4 914 aaKnown RBP16.16■□□□□ 0.18
SNX6-206ENST00000556162 FBXO16Q8IX29 292 aaPredicted RBP16.16■□□□□ 0.18
SNX6-206ENST00000556162 IL31RAQ8NI17 732 aa16.16■□□□□ 0.18
SNX6-206ENST00000556162 KATNBL1Q9H079 304 aa16.16■□□□□ 0.18
SNX6-206ENST00000556162 H3BQV1 296 aa16.16■□□□□ 0.18
SNX6-206ENST00000556162 M0R2N6 131 aa16.16■□□□□ 0.18
SNX6-206ENST00000556162 SEPT4O43236 478 aa16.16■□□□□ 0.18
SNX6-206ENST00000556162 STAM2O75886 525 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms