RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 TXKP42681 527 aa13.97□□□□□ -0.17
RNF4-222ENST00000541204 NT5C2P49902 561 aa13.97□□□□□ -0.17
RNF4-222ENST00000541204 HERVK_113P62684 666 aa13.97□□□□□ -0.17
RNF4-222ENST00000541204 UBE2SQ16763 222 aa13.97□□□□□ -0.17
RNF4-222ENST00000541204 TRAPPC11Q7Z392 1133 aa13.97□□□□□ -0.17
RNF4-222ENST00000541204 KRT25Q7Z3Z0 450 aa13.97□□□□□ -0.17
RNF4-222ENST00000541204 NEK8Q86SG6 692 aa13.97□□□□□ -0.17
RNF4-222ENST00000541204 POTEDQ86YR6 584 aa13.97□□□□□ -0.17
RNF4-222ENST00000541204 DNAJC7Q99615 494 aa13.97□□□□□ -0.17
RNF4-222ENST00000541204 CDK5RAP2Q96SN8 1893 aa13.97□□□□□ -0.17
RNF4-222ENST00000541204 TTLL1O95922 423 aa13.97□□□□□ -0.17
RNF4-222ENST00000541204 ATP1A1P05023 1023 aaKnown RBP13.97□□□□□ -0.17
RNF4-222ENST00000541204 OR52Z1P0C646 297 aa13.97□□□□□ -0.17
RNF4-222ENST00000541204 CCDC122Q5T0U0 273 aa13.97□□□□□ -0.17
RNF4-222ENST00000541204 AEBP2Q6ZN18 517 aaPredicted RBP13.97□□□□□ -0.17
RNF4-222ENST00000541204 GOLGA5Q8TBA6 731 aa13.97□□□□□ -0.17
RNF4-222ENST00000541204 ZNF507Q8TCN5 953 aa13.97□□□□□ -0.17
RNF4-222ENST00000541204 TRIM47Q96LD4 638 aa13.97□□□□□ -0.17
RNF4-222ENST00000541204 GBP3Q9H0R5 595 aa13.97□□□□□ -0.17
RNF4-222ENST00000541204 MYH1P12882 1939 aa13.97□□□□□ -0.17
RNF4-222ENST00000541204 PSMD14O00487 310 aa13.96□□□□□ -0.17
RNF4-222ENST00000541204 HLA-DOAP06340 250 aa13.96□□□□□ -0.17
RNF4-222ENST00000541204 PLCG1P19174 1290 aa13.96□□□□□ -0.17
RNF4-222ENST00000541204 TNNI2P48788 182 aa13.96□□□□□ -0.17
RNF4-222ENST00000541204 ADGRF4Q8IZF3 695 aa13.96□□□□□ -0.17
RNF4-222ENST00000541204 GJA10Q969M2 543 aa13.96□□□□□ -0.17
RNF4-222ENST00000541204 HAUS4Q9H6D7 363 aa13.96□□□□□ -0.17
RNF4-222ENST00000541204 CAPN11Q9UMQ6 739 aa13.96□□□□□ -0.17
RNF4-222ENST00000541204 ANKRD31Q8N7Z5 1873 aa13.96□□□□□ -0.17
RNF4-222ENST00000541204 B4DLN1 442 aa13.96□□□□□ -0.17
RNF4-222ENST00000541204 PLSCR1O15162 318 aa13.96□□□□□ -0.17
RNF4-222ENST00000541204 KLRC4O43908 158 aa13.96□□□□□ -0.17
RNF4-222ENST00000541204 ACTN2P35609 894 aa13.96□□□□□ -0.17
RNF4-222ENST00000541204 AOC3Q16853 763 aa13.96□□□□□ -0.17
RNF4-222ENST00000541204 TSR1Q2NL82 804 aaKnown RBP13.96□□□□□ -0.17
RNF4-222ENST00000541204 CABP7Q86V35 215 aa13.96□□□□□ -0.17
RNF4-222ENST00000541204 MSL3Q8N5Y2 521 aaKnown RBP13.96□□□□□ -0.17
RNF4-222ENST00000541204 CAPZA3Q96KX2 299 aa13.96□□□□□ -0.17
RNF4-222ENST00000541204 MMS19Q96T76 1030 aa13.96□□□□□ -0.17
RNF4-222ENST00000541204 RIOX1Q9H6W3 641 aa13.96□□□□□ -0.17
RNF4-222ENST00000541204 AGPAT5Q9NUQ2 364 aa13.96□□□□□ -0.17
RNF4-222ENST00000541204 ADAMTSL1Q8N6G6 1762 aa13.95□□□□□ -0.18
RNF4-222ENST00000541204 A0A1W2PQC6 194 aa13.95□□□□□ -0.18
RNF4-222ENST00000541204 DDTLA6NHG4 134 aaPredicted RBP13.95□□□□□ -0.18
RNF4-222ENST00000541204 USP17L10C9JJH3 530 aa13.95□□□□□ -0.18
RNF4-222ENST00000541204 H0YIN7 160 aa13.95□□□□□ -0.18
RNF4-222ENST00000541204 TDP2O95551 362 aa13.95□□□□□ -0.18
RNF4-222ENST00000541204 EEF1GP26641 437 aaKnown RBP13.95□□□□□ -0.18
RNF4-222ENST00000541204 KLK7P49862 253 aa13.95□□□□□ -0.18
RNF4-222ENST00000541204 WDR93Q6P2C0 686 aa13.95□□□□□ -0.18
RNF4-222ENST00000541204 PSMA7O14818 248 aa13.95□□□□□ -0.18
RNF4-222ENST00000541204 ECE2O60344 883 aa13.95□□□□□ -0.18
RNF4-222ENST00000541204 PPP1R11O60927 126 aaPredicted RBP13.95□□□□□ -0.18
RNF4-222ENST00000541204 ADCY7P51828 1080 aa13.95□□□□□ -0.18
RNF4-222ENST00000541204 HSP90B2PQ58FF3 399 aa13.95□□□□□ -0.18
RNF4-222ENST00000541204 THAP9Q9H5L6 903 aa13.95□□□□□ -0.18
RNF4-222ENST00000541204 DNAJC18Q9H819 358 aa13.95□□□□□ -0.18
RNF4-222ENST00000541204 JMJD4Q9H9V9 463 aa13.95□□□□□ -0.18
RNF4-222ENST00000541204 MAGEC2Q9UBF1 373 aaPredicted RBP13.95□□□□□ -0.18
RNF4-222ENST00000541204 SUGT1Q9Y2Z0 365 aa13.95□□□□□ -0.18
RNF4-222ENST00000541204 SAR1BQ9Y6B6 198 aa13.95□□□□□ -0.18
RNF4-222ENST00000541204 SLC37A4O43826 429 aa13.94□□□□□ -0.18
RNF4-222ENST00000541204 SNAP25P60880 206 aa13.94□□□□□ -0.18
RNF4-222ENST00000541204 STIM1Q13586 685 aa13.94□□□□□ -0.18
RNF4-222ENST00000541204 KCNB1Q14721 858 aa13.94□□□□□ -0.18
RNF4-222ENST00000541204 ASPRV1Q53RT3 343 aa13.94□□□□□ -0.18
RNF4-222ENST00000541204 KIAA1328Q86T90 577 aa13.94□□□□□ -0.18
RNF4-222ENST00000541204 LCMT1Q9UIC8 334 aa13.94□□□□□ -0.18
RNF4-222ENST00000541204 RCCD1A6NED2 376 aa13.94□□□□□ -0.18
RNF4-222ENST00000541204 RHOBTB3O94955 611 aa13.94□□□□□ -0.18
RNF4-222ENST00000541204 TUBBP07437 444 aa13.94□□□□□ -0.18
RNF4-222ENST00000541204 TRIM21P19474 475 aaKnown RBP13.94□□□□□ -0.18
RNF4-222ENST00000541204 USP14P54578 494 aa13.94□□□□□ -0.18
RNF4-222ENST00000541204 ZNF543Q08ER8 600 aa13.94□□□□□ -0.18
RNF4-222ENST00000541204 TTI2Q6NXR4 508 aa13.94□□□□□ -0.18
RNF4-222ENST00000541204 HHIPL2Q6UWX4 724 aa13.94□□□□□ -0.18
RNF4-222ENST00000541204 GIMAP8Q8ND71 665 aaPredicted RBP13.94□□□□□ -0.18
RNF4-222ENST00000541204 HPS3Q969F9 1004 aa13.94□□□□□ -0.18
RNF4-222ENST00000541204 TUBGCP2Q9BSJ2 902 aa13.94□□□□□ -0.18
RNF4-222ENST00000541204 IGKV6D-41A0A0C4DH26 115 aa13.94□□□□□ -0.18
RNF4-222ENST00000541204 GDF11O95390 407 aa13.94□□□□□ -0.18
RNF4-222ENST00000541204 NOVP48745 357 aa13.94□□□□□ -0.18
RNF4-222ENST00000541204 DNM2P50570 870 aa13.94□□□□□ -0.18
RNF4-222ENST00000541204 LEKR1Q6ZMV7 388 aa13.94□□□□□ -0.18
RNF4-222ENST00000541204 PODNQ7Z5L7 613 aa13.94□□□□□ -0.18
RNF4-222ENST00000541204 CSGALNACT2Q8N6G5 542 aa13.94□□□□□ -0.18
RNF4-222ENST00000541204 FAM71BQ8TC56 605 aa13.94□□□□□ -0.18
RNF4-222ENST00000541204 JAKMIP2Q96AA8 810 aa13.94□□□□□ -0.18
RNF4-222ENST00000541204 ZFP91Q96JP5 570 aaPredicted RBP13.94□□□□□ -0.18
RNF4-222ENST00000541204 LACRTQ9GZZ8 138 aa13.94□□□□□ -0.18
RNF4-222ENST00000541204 EXOC1Q9NV70 894 aa13.94□□□□□ -0.18
RNF4-222ENST00000541204 KBTBD4Q9NVX7 518 aa13.94□□□□□ -0.18
RNF4-222ENST00000541204 CWC15Q9P013 229 aaKnown RBP13.94□□□□□ -0.18
RNF4-222ENST00000541204 FEZ2Q9UHY8 353 aaPredicted RBP13.94□□□□□ -0.18
RNF4-222ENST00000541204 LTBP1Q14766 1721 aa13.93□□□□□ -0.18
RNF4-222ENST00000541204 RASSF10A6NK89 507 aa13.93□□□□□ -0.18
RNF4-222ENST00000541204 KRT83P78385 493 aa13.93□□□□□ -0.18
RNF4-222ENST00000541204 DUSP9Q99956 384 aaKnown RBP13.93□□□□□ -0.18
RNF4-222ENST00000541204 TRIM34Q9BYJ4 488 aa13.93□□□□□ -0.18
RNF4-222ENST00000541204 SWAP70Q9UH65 585 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms