RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 SELPP16109 830 aa8.79□□□□□ -1
GNE-205ENST00000539815 OAZ1P54368 228 aa8.79□□□□□ -1
GNE-205ENST00000539815 CNTN2Q02246 1040 aa8.79□□□□□ -1
GNE-205ENST00000539815 NFX1Q12986 1120 aaKnown RBP8.79□□□□□ -1
GNE-205ENST00000539815 HERC6Q8IVU3 1022 aa8.79□□□□□ -1
GNE-205ENST00000539815 RNF169Q8NCN4 708 aa8.79□□□□□ -1
GNE-205ENST00000539815 PHOSPHO2Q8TCD6 241 aa8.79□□□□□ -1
GNE-205ENST00000539815 PANK1Q8TE04 598 aa8.79□□□□□ -1
GNE-205ENST00000539815 SSH3Q8TE77 659 aa8.79□□□□□ -1
GNE-205ENST00000539815 PIBF1Q8WXW3 757 aa8.79□□□□□ -1
GNE-205ENST00000539815 RAD9AQ99638 391 aa8.79□□□□□ -1
GNE-205ENST00000539815 ALDH8A1Q9H2A2 487 aaPredicted RBP8.79□□□□□ -1
GNE-205ENST00000539815 CACNA1HO95180 2353 aa8.79□□□□□ -1
GNE-205ENST00000539815 STAG3L1P0CL83 205 aa8.78□□□□□ -1
GNE-205ENST00000539815 VASPP50552 380 aaPredicted RBP8.78□□□□□ -1
GNE-205ENST00000539815 MTX1Q13505 466 aa8.78□□□□□ -1
GNE-205ENST00000539815 RCSD1Q6JBY9 416 aa8.78□□□□□ -1
GNE-205ENST00000539815 UBE2ZQ9H832 354 aaPredicted RBP8.78□□□□□ -1
GNE-205ENST00000539815 RAPGEFL1Q9UHV5 662 aa8.78□□□□□ -1
GNE-205ENST00000539815 ABHD14A-ACY1A0A1B0GW23 586 aa8.78□□□□□ -1
GNE-205ENST00000539815 PTMSP20962 102 aa8.78□□□□□ -1
GNE-205ENST00000539815 GJA9P57773 515 aa8.78□□□□□ -1
GNE-205ENST00000539815 AKAP17AQ02040 695 aaKnown RBP8.78□□□□□ -1
GNE-205ENST00000539815 CES5AQ6NT32 575 aa8.78□□□□□ -1
GNE-205ENST00000539815 ANKRD33Q7Z3H0 272 aa8.78□□□□□ -1
GNE-205ENST00000539815 BANK1Q8NDB2 785 aa8.78□□□□□ -1
GNE-205ENST00000539815 SAMD11Q96NU1 681 aa8.78□□□□□ -1
GNE-205ENST00000539815 LRFN3Q9BTN0 628 aa8.78□□□□□ -1
GNE-205ENST00000539815 FAM186AA6NE01 2351 aa8.78□□□□□ -1
GNE-205ENST00000539815 KIF20AO95235 890 aa8.78□□□□□ -1
GNE-205ENST00000539815 SHROOM1Q2M3G4 852 aaPredicted RBP8.78□□□□□ -1
GNE-205ENST00000539815 TRMT1LQ7Z2T5 733 aaKnown RBP8.78□□□□□ -1
GNE-205ENST00000539815 ATP6V0A1Q93050 837 aa8.78□□□□□ -1
GNE-205ENST00000539815 RPGRIP1Q96KN7 1286 aa8.78□□□□□ -1
GNE-205ENST00000539815 RWDD3Q9Y3V2 267 aa8.78□□□□□ -1
GNE-205ENST00000539815 RSPH10B2B2RC85 870 aa8.77□□□□□ -1
GNE-205ENST00000539815 BACH1O14867 736 aa8.77□□□□□ -1
GNE-205ENST00000539815 RSPH10BP0C881 870 aa8.77□□□□□ -1
GNE-205ENST00000539815 TOP1P11387 765 aaKnown RBP8.77□□□□□ -1
GNE-205ENST00000539815 SNAP25P60880 206 aa8.77□□□□□ -1
GNE-205ENST00000539815 RRP1BQ14684 758 aaKnown RBP8.77□□□□□ -1
GNE-205ENST00000539815 AFAP1L1Q8TED9 768 aa8.77□□□□□ -1
GNE-205ENST00000539815 C11orf84Q9BUA3 381 aaPredicted RBP8.77□□□□□ -1
GNE-205ENST00000539815 A0A1W2PRG0 241 aa8.77□□□□□ -1.01
GNE-205ENST00000539815 ADD2P35612 726 aa8.77□□□□□ -1.01
GNE-205ENST00000539815 SLC16A2P36021 539 aa8.77□□□□□ -1.01
GNE-205ENST00000539815 NONOQ15233 471 aaKnown RBP eCLIP8.77□□□□□ -1.01
GNE-205ENST00000539815 PKN1Q16512 942 aa8.77□□□□□ -1.01
GNE-205ENST00000539815 ANKRD45Q5TZF3 282 aa8.77□□□□□ -1.01
GNE-205ENST00000539815 LRRC8DQ7L1W4 858 aa8.77□□□□□ -1.01
GNE-205ENST00000539815 ZNF467Q7Z7K2 595 aaPredicted RBP8.77□□□□□ -1.01
GNE-205ENST00000539815 TRPV1Q8NER1 839 aa8.77□□□□□ -1.01
GNE-205ENST00000539815 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.77□□□□□ -1.01
GNE-205ENST00000539815 CEP95Q96GE4 821 aa8.77□□□□□ -1.01
GNE-205ENST00000539815 AGBL1Q96MI9 1066 aa8.77□□□□□ -1.01
GNE-205ENST00000539815 RMDN3Q96TC7 470 aa8.77□□□□□ -1.01
GNE-205ENST00000539815 TRMT13Q9NUP7 481 aaKnown RBP8.77□□□□□ -1.01
GNE-205ENST00000539815 CCDC171Q6TFL3 1326 aa8.77□□□□□ -1.01
GNE-205ENST00000539815 BDP1A6H8Y1 2624 aa8.77□□□□□ -1.01
GNE-205ENST00000539815 DOCK3Q8IZD9 2030 aa8.77□□□□□ -1.01
GNE-205ENST00000539815 ZNF213O14771 459 aa8.77□□□□□ -1.01
GNE-205ENST00000539815 BAIAP3O94812 1187 aa8.77□□□□□ -1.01
GNE-205ENST00000539815 EIF2AK2P19525 551 aaKnown RBP8.77□□□□□ -1.01
GNE-205ENST00000539815 KCNQ1P51787 676 aa8.77□□□□□ -1.01
GNE-205ENST00000539815 KCNV1Q6PIU1 500 aa8.77□□□□□ -1.01
GNE-205ENST00000539815 FBXO11Q86XK2 927 aa8.77□□□□□ -1.01
GNE-205ENST00000539815 USP6NLQ92738 828 aa8.77□□□□□ -1.01
GNE-205ENST00000539815 ZNF512BQ96KM6 892 aaPredicted RBP8.77□□□□□ -1.01
GNE-205ENST00000539815 PRO3102Q9H379 93 aa8.77□□□□□ -1.01
GNE-205ENST00000539815 CCER2I3L3R5 266 aa8.76□□□□□ -1.01
GNE-205ENST00000539815 AXDND1Q5T1B0 1012 aaPredicted RBP8.76□□□□□ -1.01
GNE-205ENST00000539815 GPATCH4Q5T3I0 446 aaKnown RBP8.76□□□□□ -1.01
GNE-205ENST00000539815 C16orf86Q6ZW13 317 aa8.76□□□□□ -1.01
GNE-205ENST00000539815 NLRX1Q86UT6 975 aa8.76□□□□□ -1.01
GNE-205ENST00000539815 USP38Q8NB14 1042 aa8.76□□□□□ -1.01
GNE-205ENST00000539815 GDPD5Q8WTR4 605 aa8.76□□□□□ -1.01
GNE-205ENST00000539815 AFG1LQ8WV93 481 aa8.76□□□□□ -1.01
GNE-205ENST00000539815 A1CFQ9NQ94 594 aaKnown RBP8.76□□□□□ -1.01
GNE-205ENST00000539815 TBX21Q9UL17 535 aa8.76□□□□□ -1.01
GNE-205ENST00000539815 TRPC6Q9Y210 931 aa8.76□□□□□ -1.01
GNE-205ENST00000539815 PCDHA1Q9Y5I3 950 aa8.76□□□□□ -1.01
GNE-205ENST00000539815 FRMPD2Q68DX3 1309 aaPredicted RBP8.76□□□□□ -1.01
GNE-205ENST00000539815 EMSYQ7Z589 1322 aa8.76□□□□□ -1.01
GNE-205ENST00000539815 PARP1P09874 1014 aaKnown RBP8.76□□□□□ -1.01
GNE-205ENST00000539815 IGBP1P78318 339 aa8.76□□□□□ -1.01
GNE-205ENST00000539815 LAMC2Q13753 1193 aa8.76□□□□□ -1.01
GNE-205ENST00000539815 DUSP28Q4G0W2 176 aa8.76□□□□□ -1.01
GNE-205ENST00000539815 C1orf53Q5VUE5 145 aa8.76□□□□□ -1.01
GNE-205ENST00000539815 CNKSR3Q6P9H4 555 aa8.76□□□□□ -1.01
GNE-205ENST00000539815 THNSL1Q8IYQ7 743 aa8.76□□□□□ -1.01
GNE-205ENST00000539815 CHAMP1Q96JM3 812 aa8.76□□□□□ -1.01
GNE-205ENST00000539815 SPATA33Q96N06 139 aa8.76□□□□□ -1.01
GNE-205ENST00000539815 PANK2Q9BZ23 570 aa8.76□□□□□ -1.01
GNE-205ENST00000539815 TLR7Q9NYK1 1049 aaKnown RBP8.76□□□□□ -1.01
GNE-205ENST00000539815 PCDHB12Q9Y5F1 795 aa8.76□□□□□ -1.01
GNE-205ENST00000539815 BRWD1Q9NSI6 2320 aa8.76□□□□□ -1.01
GNE-205ENST00000539815 SIPA1L3O60292 1781 aaPredicted RBP8.76□□□□□ -1.01
GNE-205ENST00000539815 HAND2P61296 217 aa8.76□□□□□ -1.01
GNE-205ENST00000539815 ZNF792Q3KQV3 632 aa8.76□□□□□ -1.01
GNE-205ENST00000539815 NOC4LQ9BVI4 516 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms