RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 PPP1R12CQ9BZL4 782 aa17.4■□□□□ 0.38
RAB40B-202ENST00000538809 GRIN2DO15399 1336 aa17.4■□□□□ 0.38
RAB40B-202ENST00000538809 B4DLN1 442 aa17.39■□□□□ 0.37
RAB40B-202ENST00000538809 SLC27A2O14975 620 aa17.39■□□□□ 0.37
RAB40B-202ENST00000538809 TLR3O15455 904 aaKnown RBP17.39■□□□□ 0.37
RAB40B-202ENST00000538809 PRC1O43663 620 aa17.39■□□□□ 0.37
RAB40B-202ENST00000538809 CABYRO75952 493 aa17.39■□□□□ 0.37
RAB40B-202ENST00000538809 ARIH2O95376 493 aa17.39■□□□□ 0.37
RAB40B-202ENST00000538809 MYL3P08590 195 aa17.39■□□□□ 0.37
RAB40B-202ENST00000538809 EIF2AK2P19525 551 aaKnown RBP17.39■□□□□ 0.37
RAB40B-202ENST00000538809 MRPL12P52815 198 aaKnown RBP17.39■□□□□ 0.37
RAB40B-202ENST00000538809 TROAPQ12815 778 aa17.39■□□□□ 0.37
RAB40B-202ENST00000538809 ITGA7Q13683 1181 aa17.39■□□□□ 0.37
RAB40B-202ENST00000538809 CATIPQ7Z7H3 387 aa17.39■□□□□ 0.37
RAB40B-202ENST00000538809 MCF2L2Q86YR7 1114 aa17.39■□□□□ 0.37
RAB40B-202ENST00000538809 SCFD2Q8WU76 684 aa17.39■□□□□ 0.37
RAB40B-202ENST00000538809 PIBF1Q8WXW3 757 aa17.39■□□□□ 0.37
RAB40B-202ENST00000538809 RMDN3Q96TC7 470 aa17.39■□□□□ 0.37
RAB40B-202ENST00000538809 LY9Q9HBG7 655 aa17.39■□□□□ 0.37
RAB40B-202ENST00000538809 CYTH3O43739 400 aa17.38■□□□□ 0.37
RAB40B-202ENST00000538809 TIMP1P01033 207 aa17.38■□□□□ 0.37
RAB40B-202ENST00000538809 CREB3L3Q68CJ9 461 aa17.38■□□□□ 0.37
RAB40B-202ENST00000538809 GPR153Q6NV75 609 aa17.38■□□□□ 0.37
RAB40B-202ENST00000538809 CASC1Q6TDU7 716 aa17.38■□□□□ 0.37
RAB40B-202ENST00000538809 SLC43A3Q8NBI5 491 aa17.38■□□□□ 0.37
RAB40B-202ENST00000538809 NSUN6Q8TEA1 469 aaKnown RBP17.38■□□□□ 0.37
RAB40B-202ENST00000538809 MTA3Q9BTC8 594 aa17.38■□□□□ 0.37
RAB40B-202ENST00000538809 MAF1Q9H063 256 aa17.38■□□□□ 0.37
RAB40B-202ENST00000538809 RIOX1Q9H6W3 641 aa17.38■□□□□ 0.37
RAB40B-202ENST00000538809 PCDHA1Q9Y5I3 950 aa17.38■□□□□ 0.37
RAB40B-202ENST00000538809 NKRFO15226 690 aaKnown RBP eCLIP17.37■□□□□ 0.37
RAB40B-202ENST00000538809 CDC45O75419 566 aa17.37■□□□□ 0.37
RAB40B-202ENST00000538809 CD4P01730 458 aa17.37■□□□□ 0.37
RAB40B-202ENST00000538809 TXNP10599 105 aaKnown RBP17.37■□□□□ 0.37
RAB40B-202ENST00000538809 CPT1AP50416 773 aa17.37■□□□□ 0.37
RAB40B-202ENST00000538809 HSD17B4P51659 736 aa17.37■□□□□ 0.37
RAB40B-202ENST00000538809 TTLL4Q14679 1199 aa17.37■□□□□ 0.37
RAB40B-202ENST00000538809 ARHGEF16Q5VV41 709 aa17.37■□□□□ 0.37
RAB40B-202ENST00000538809 SEPT14Q6ZU15 432 aa17.37■□□□□ 0.37
RAB40B-202ENST00000538809 ZNF654Q8IZM8 581 aa17.37■□□□□ 0.37
RAB40B-202ENST00000538809 PPP1R13LQ8WUF5 828 aa17.37■□□□□ 0.37
RAB40B-202ENST00000538809 RNPC3Q96LT9 517 aaKnown RBP17.37■□□□□ 0.37
RAB40B-202ENST00000538809 PXMP2Q9NR77 195 aa17.37■□□□□ 0.37
RAB40B-202ENST00000538809 POLR3EQ9NVU0 708 aa17.37■□□□□ 0.37
RAB40B-202ENST00000538809 COL6A3P12111 3177 aa17.36■□□□□ 0.37
RAB40B-202ENST00000538809 SH2B2O14492 632 aaPredicted RBP17.36■□□□□ 0.37
RAB40B-202ENST00000538809 B4GALT4O60513 344 aa17.36■□□□□ 0.37
RAB40B-202ENST00000538809 HOXA13P31271 388 aaPredicted RBP17.36■□□□□ 0.37
RAB40B-202ENST00000538809 PURAQ00577 322 aaKnown RBP17.36■□□□□ 0.37
RAB40B-202ENST00000538809 RAB11FIP4Q86YS3 637 aa17.36■□□□□ 0.37
RAB40B-202ENST00000538809 LRRC2Q9BYS8 371 aa17.36■□□□□ 0.37
RAB40B-202ENST00000538809 TRPV6Q9H1D0 765 aa17.36■□□□□ 0.37
RAB40B-202ENST00000538809 UMODL1Q5DID0 1318 aa17.36■□□□□ 0.37
RAB40B-202ENST00000538809 DDAH1O94760 285 aa17.35■□□□□ 0.37
RAB40B-202ENST00000538809 RXRAP19793 462 aa17.35■□□□□ 0.37
RAB40B-202ENST00000538809 CYP2C18P33260 490 aa17.35■□□□□ 0.37
RAB40B-202ENST00000538809 MCM5P33992 734 aa17.35■□□□□ 0.37
RAB40B-202ENST00000538809 GHRHRQ02643 423 aa17.35■□□□□ 0.37
RAB40B-202ENST00000538809 STXBP2Q15833 593 aa17.35■□□□□ 0.37
RAB40B-202ENST00000538809 LY6KQ17RY6 165 aa17.35■□□□□ 0.37
RAB40B-202ENST00000538809 MFSD5Q6N075 450 aa17.35■□□□□ 0.37
RAB40B-202ENST00000538809 NFXL1Q6ZNB6 911 aa17.35■□□□□ 0.37
RAB40B-202ENST00000538809 CTCFLQ8NI51 663 aaPredicted RBP17.35■□□□□ 0.37
RAB40B-202ENST00000538809 FAM161BQ96MY7 647 aa17.35■□□□□ 0.37
RAB40B-202ENST00000538809 IWS1Q96ST2 819 aa17.35■□□□□ 0.37
RAB40B-202ENST00000538809 MTG1Q9BT17 334 aaPredicted RBP17.35■□□□□ 0.37
RAB40B-202ENST00000538809 PNMA6FA0A0J9YX94 578 aa17.34■□□□□ 0.37
RAB40B-202ENST00000538809 NR3C2P08235 984 aa17.34■□□□□ 0.37
RAB40B-202ENST00000538809 MYCLP12524 364 aaPredicted RBP17.34■□□□□ 0.37
RAB40B-202ENST00000538809 CSF2RAP15509 400 aa17.34■□□□□ 0.37
RAB40B-202ENST00000538809 BRDTQ58F21 947 aaPredicted RBP17.34■□□□□ 0.37
RAB40B-202ENST00000538809 CCDC62Q6P9F0 684 aa17.34■□□□□ 0.37
RAB40B-202ENST00000538809 IL31RAQ8NI17 732 aa17.34■□□□□ 0.37
RAB40B-202ENST00000538809 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.34■□□□□ 0.37
RAB40B-202ENST00000538809 ALDH8A1Q9H2A2 487 aaPredicted RBP17.34■□□□□ 0.37
RAB40B-202ENST00000538809 HIPK3Q9H422 1215 aa17.34■□□□□ 0.37
RAB40B-202ENST00000538809 MTMR10Q9NXD2 777 aa17.34■□□□□ 0.37
RAB40B-202ENST00000538809 MYO9BQ13459 2157 aa17.33■□□□□ 0.37
RAB40B-202ENST00000538809 TET1Q8NFU7 2136 aa17.33■□□□□ 0.37
RAB40B-202ENST00000538809 CCDC69A6NI79 296 aa17.33■□□□□ 0.36
RAB40B-202ENST00000538809 PLEKHA8P1O95397 391 aa17.33■□□□□ 0.36
RAB40B-202ENST00000538809 ACRP10323 421 aa17.33■□□□□ 0.36
RAB40B-202ENST00000538809 CHMP4BP1P59074 171 aa17.33■□□□□ 0.36
RAB40B-202ENST00000538809 ARHGAP1Q07960 439 aa17.33■□□□□ 0.36
RAB40B-202ENST00000538809 PPIGQ13427 754 aaKnown RBP eCLIP17.33■□□□□ 0.36
RAB40B-202ENST00000538809 FAM47CQ5HY64 1035 aa17.33■□□□□ 0.36
RAB40B-202ENST00000538809 FCHSD1Q86WN1 690 aa17.33■□□□□ 0.36
RAB40B-202ENST00000538809 TMEM199Q8N511 208 aa17.33■□□□□ 0.36
RAB40B-202ENST00000538809 AFG1LQ8WV93 481 aa17.33■□□□□ 0.36
RAB40B-202ENST00000538809 ZFP91Q96JP5 570 aaPredicted RBP17.33■□□□□ 0.36
RAB40B-202ENST00000538809 TMEM87BQ96K49 555 aa17.33■□□□□ 0.36
RAB40B-202ENST00000538809 MAP3K14Q99558 947 aa17.33■□□□□ 0.36
RAB40B-202ENST00000538809 PDCD2LQ9BRP1 358 aa17.33■□□□□ 0.36
RAB40B-202ENST00000538809 SPZ1Q9BXG8 430 aa17.33■□□□□ 0.36
RAB40B-202ENST00000538809 TRMT13Q9NUP7 481 aaKnown RBP17.33■□□□□ 0.36
RAB40B-202ENST00000538809 PTPRSQ13332 1948 aa17.32■□□□□ 0.36
RAB40B-202ENST00000538809 A6NJR5 290 aa17.32■□□□□ 0.36
RAB40B-202ENST00000538809 GCOM1H8Y6P7 765 aaPredicted RBP17.32■□□□□ 0.36
RAB40B-202ENST00000538809 GH1P01241 217 aa17.32■□□□□ 0.36
RAB40B-202ENST00000538809 MMP3P08254 477 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms