RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 TRAF1Q13077 416 aa26.75■■□□□ 1.87
CLDND1-230ENST00000514537 SCFD2Q8WU76 684 aa26.75■■□□□ 1.87
CLDND1-230ENST00000514537 RMDN3Q96TC7 470 aa26.75■■□□□ 1.87
CLDND1-230ENST00000514537 MAP3K20Q9NYL2 800 aaKnown RBP26.75■■□□□ 1.87
CLDND1-230ENST00000514537 PNMA6FA0A0J9YX94 578 aa26.74■■□□□ 1.87
CLDND1-230ENST00000514537 NKRFO15226 690 aaKnown RBP eCLIP26.74■■□□□ 1.87
CLDND1-230ENST00000514537 CFBP00751 764 aa26.74■■□□□ 1.87
CLDND1-230ENST00000514537 LIFRP42702 1097 aa26.74■■□□□ 1.87
CLDND1-230ENST00000514537 RNF20Q5VTR2 975 aa26.74■■□□□ 1.87
CLDND1-230ENST00000514537 SAMD3Q8N6K7 520 aa26.74■■□□□ 1.87
CLDND1-230ENST00000514537 SLC43A3Q8NBI5 491 aa26.74■■□□□ 1.87
CLDND1-230ENST00000514537 LRCH3Q96II8 777 aa26.74■■□□□ 1.87
CLDND1-230ENST00000514537 PPP2R5BQ15173 497 aa26.73■■□□□ 1.87
CLDND1-230ENST00000514537 CTCFLQ8NI51 663 aaPredicted RBP26.73■■□□□ 1.87
CLDND1-230ENST00000514537 MYL10Q9BUA6 226 aa26.73■■□□□ 1.87
CLDND1-230ENST00000514537 RAG1P15918 1043 aa26.72■■□□□ 1.87
CLDND1-230ENST00000514537 SMARCA1P28370 1054 aa26.72■■□□□ 1.87
CLDND1-230ENST00000514537 KIF5BP33176 963 aa26.72■■□□□ 1.87
CLDND1-230ENST00000514537 STXBP2Q15833 593 aa26.72■■□□□ 1.87
CLDND1-230ENST00000514537 TSGA10IPQ3SY00 556 aa26.72■■□□□ 1.87
CLDND1-230ENST00000514537 ARHGEF16Q5VV41 709 aa26.72■■□□□ 1.87
CLDND1-230ENST00000514537 NFXL1Q6ZNB6 911 aa26.72■■□□□ 1.87
CLDND1-230ENST00000514537 FAM126BQ8IXS8 530 aa26.72■■□□□ 1.87
CLDND1-230ENST00000514537 OR6J1Q8NGC5 347 aa26.72■■□□□ 1.87
CLDND1-230ENST00000514537 PXMP2Q9NR77 195 aa26.72■■□□□ 1.87
CLDND1-230ENST00000514537 TBX21Q9UL17 535 aa26.72■■□□□ 1.87
CLDND1-230ENST00000514537 GRIN2DO15399 1336 aa26.71■■□□□ 1.87
CLDND1-230ENST00000514537 CCDC69A6NI79 296 aa26.71■■□□□ 1.87
CLDND1-230ENST00000514537 TXNP10599 105 aaKnown RBP26.71■■□□□ 1.87
CLDND1-230ENST00000514537 ITGA7Q13683 1181 aa26.71■■□□□ 1.87
CLDND1-230ENST00000514537 TTLL4Q14679 1199 aa26.71■■□□□ 1.87
CLDND1-230ENST00000514537 CCDC62Q6P9F0 684 aa26.71■■□□□ 1.87
CLDND1-230ENST00000514537 COPS5Q92905 334 aa26.71■■□□□ 1.87
CLDND1-230ENST00000514537 SPZ1Q9BXG8 430 aa26.71■■□□□ 1.87
CLDND1-230ENST00000514537 SEZ6LQ9BYH1 1024 aa26.71■■□□□ 1.87
CLDND1-230ENST00000514537 ARIH2O95376 493 aa26.7■■□□□ 1.86
CLDND1-230ENST00000514537 EIF2AK2P19525 551 aaKnown RBP26.7■■□□□ 1.86
CLDND1-230ENST00000514537 CPT1AP50416 773 aa26.7■■□□□ 1.86
CLDND1-230ENST00000514537 NEK1Q96PY6 1258 aa26.7■■□□□ 1.86
CLDND1-230ENST00000514537 LZTS2Q9BRK4 669 aa26.7■■□□□ 1.86
CLDND1-230ENST00000514537 LRRC2Q9BYS8 371 aa26.7■■□□□ 1.86
CLDND1-230ENST00000514537 POLR3EQ9NVU0 708 aa26.7■■□□□ 1.86
CLDND1-230ENST00000514537 BAZ2BQ9UIF8 2168 aaKnown RBP26.7■■□□□ 1.86
CLDND1-230ENST00000514537 LTBP2Q14767 1821 aa26.69■■□□□ 1.86
CLDND1-230ENST00000514537 EIF3JO75822 258 aaKnown RBP26.69■■□□□ 1.86
CLDND1-230ENST00000514537 CD4P01730 458 aa26.69■■□□□ 1.86
CLDND1-230ENST00000514537 NEFLP07196 543 aa26.69■■□□□ 1.86
CLDND1-230ENST00000514537 NR3C2P08235 984 aa26.69■■□□□ 1.86
CLDND1-230ENST00000514537 GNAQP50148 359 aa26.69■■□□□ 1.86
CLDND1-230ENST00000514537 GPR153Q6NV75 609 aa26.69■■□□□ 1.86
CLDND1-230ENST00000514537 SEPT14Q6ZU15 432 aa26.69■■□□□ 1.86
CLDND1-230ENST00000514537 RASEFQ8IZ41 740 aa26.69■■□□□ 1.86
CLDND1-230ENST00000514537 A6NJR5 290 aa26.68■■□□□ 1.86
CLDND1-230ENST00000514537 GCOM1H8Y6P7 765 aaPredicted RBP26.68■■□□□ 1.86
CLDND1-230ENST00000514537 TLR3O15455 904 aaKnown RBP26.68■■□□□ 1.86
CLDND1-230ENST00000514537 TIMP1P01033 207 aa26.68■■□□□ 1.86
CLDND1-230ENST00000514537 POLR2MP0CAP2 368 aa26.68■■□□□ 1.86
CLDND1-230ENST00000514537 CALM1P0DP23 149 aa26.68■■□□□ 1.86
CLDND1-230ENST00000514537 CALM2P0DP24 149 aa26.68■■□□□ 1.86
CLDND1-230ENST00000514537 CALM3P0DP25 149 aa26.68■■□□□ 1.86
CLDND1-230ENST00000514537 HOXA13P31271 388 aaPredicted RBP26.68■■□□□ 1.86
CLDND1-230ENST00000514537 PSMC6P62333 389 aa26.68■■□□□ 1.86
CLDND1-230ENST00000514537 SHHQ15465 462 aa26.68■■□□□ 1.86
CLDND1-230ENST00000514537 BRDTQ58F21 947 aaPredicted RBP26.68■■□□□ 1.86
CLDND1-230ENST00000514537 SGMS1Q86VZ5 419 aa26.68■■□□□ 1.86
CLDND1-230ENST00000514537 PIBF1Q8WXW3 757 aa26.68■■□□□ 1.86
CLDND1-230ENST00000514537 SLC12A7Q9Y666 1083 aa26.68■■□□□ 1.86
CLDND1-230ENST00000514537 LAMA2P24043 3122 aaKnown RBP26.68■■□□□ 1.86
CLDND1-230ENST00000514537 PURAQ00577 322 aaKnown RBP26.67■■□□□ 1.86
CLDND1-230ENST00000514537 EXOSC10Q01780 885 aaKnown RBP26.67■■□□□ 1.86
CLDND1-230ENST00000514537 C9orf50Q5SZB4 431 aa26.67■■□□□ 1.86
CLDND1-230ENST00000514537 SRBD1Q8N5C6 995 aaKnown RBP26.67■■□□□ 1.86
CLDND1-230ENST00000514537 RRP36Q96EU6 259 aaKnown RBP26.67■■□□□ 1.86
CLDND1-230ENST00000514537 PDCD2LQ9BRP1 358 aa26.67■■□□□ 1.86
CLDND1-230ENST00000514537 MYH6P13533 1939 aa26.67■■□□□ 1.86
CLDND1-230ENST00000514537 PLEKHA8P1O95397 391 aa26.66■■□□□ 1.86
CLDND1-230ENST00000514537 MYL3P08590 195 aa26.66■■□□□ 1.86
CLDND1-230ENST00000514537 RXRAP19793 462 aa26.66■■□□□ 1.86
CLDND1-230ENST00000514537 DHX32Q7L7V1 743 aaKnown RBP26.66■■□□□ 1.86
CLDND1-230ENST00000514537 MTG1Q9BT17 334 aaPredicted RBP26.66■■□□□ 1.86
CLDND1-230ENST00000514537 KPNA6O60684 536 aa26.65■■□□□ 1.86
CLDND1-230ENST00000514537 EPHB4P54760 987 aa26.65■■□□□ 1.86
CLDND1-230ENST00000514537 FPGSQ05932 587 aa26.65■■□□□ 1.86
CLDND1-230ENST00000514537 LY6KQ17RY6 165 aa26.65■■□□□ 1.86
CLDND1-230ENST00000514537 ADCK5Q3MIX3 580 aa26.65■■□□□ 1.86
CLDND1-230ENST00000514537 VSIG10LQ86VR7 867 aa26.65■■□□□ 1.86
CLDND1-230ENST00000514537 FANCBQ8NB91 859 aa26.65■■□□□ 1.86
CLDND1-230ENST00000514537 GH1P01241 217 aa26.64■■□□□ 1.86
CLDND1-230ENST00000514537 KRT32Q14532 448 aa26.64■■□□□ 1.86
CLDND1-230ENST00000514537 PGM5Q15124 567 aa26.64■■□□□ 1.86
CLDND1-230ENST00000514537 MFSD5Q6N075 450 aa26.64■■□□□ 1.86
CLDND1-230ENST00000514537 KCNB2Q92953 911 aa26.64■■□□□ 1.86
CLDND1-230ENST00000514537 DDX41Q9UJV9 622 aaKnown RBP26.64■■□□□ 1.86
CLDND1-230ENST00000514537 MYCLP12524 364 aaPredicted RBP26.63■■□□□ 1.85
CLDND1-230ENST00000514537 ARHGAP1Q07960 439 aa26.63■■□□□ 1.85
CLDND1-230ENST00000514537 FCHSD1Q86WN1 690 aa26.63■■□□□ 1.85
CLDND1-230ENST00000514537 RAB11FIP4Q86YS3 637 aa26.63■■□□□ 1.85
CLDND1-230ENST00000514537 CMTR1Q8N1G2 835 aaKnown RBP26.63■■□□□ 1.85
CLDND1-230ENST00000514537 SEC63Q9UGP8 760 aaKnown RBP26.63■■□□□ 1.85
CLDND1-230ENST00000514537 B4GALT4O60513 344 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms