RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 VPS53Q5VIR6 699 aa21.17■□□□□ 0.98
CLDND1-217ENST00000508071 PPP1R13LQ8WUF5 828 aa21.17■□□□□ 0.98
CLDND1-217ENST00000508071 CLEC4DQ8WXI8 215 aa21.17■□□□□ 0.98
CLDND1-217ENST00000508071 ARNTL2Q8WYA1 636 aa21.17■□□□□ 0.98
CLDND1-217ENST00000508071 FAM122AQ96E09 287 aa21.17■□□□□ 0.98
CLDND1-217ENST00000508071 TMEM47Q9BQJ4 181 aa21.17■□□□□ 0.98
CLDND1-217ENST00000508071 TRIP12Q14669 1992 aaPredicted RBP21.17■□□□□ 0.98
CLDND1-217ENST00000508071 TET1Q8NFU7 2136 aa21.16■□□□□ 0.98
CLDND1-217ENST00000508071 A6NJR5 290 aa21.16■□□□□ 0.98
CLDND1-217ENST00000508071 B4DLN1 442 aa21.16■□□□□ 0.98
CLDND1-217ENST00000508071 FGRP09769 529 aa21.16■□□□□ 0.98
CLDND1-217ENST00000508071 PLA2G5P39877 138 aa21.16■□□□□ 0.98
CLDND1-217ENST00000508071 MRPL12P52815 198 aaKnown RBP21.16■□□□□ 0.98
CLDND1-217ENST00000508071 ALX1Q15699 326 aa21.16■□□□□ 0.98
CLDND1-217ENST00000508071 HERC6Q8IVU3 1022 aa21.16■□□□□ 0.98
CLDND1-217ENST00000508071 DNERQ8NFT8 737 aa21.16■□□□□ 0.98
CLDND1-217ENST00000508071 COG5Q9UP83 839 aa21.16■□□□□ 0.98
CLDND1-217ENST00000508071 EPOPA6NHQ4 379 aa21.15■□□□□ 0.98
CLDND1-217ENST00000508071 TXNP10599 105 aaKnown RBP21.15■□□□□ 0.98
CLDND1-217ENST00000508071 CHMP4BP1P59074 171 aa21.15■□□□□ 0.98
CLDND1-217ENST00000508071 RPS6P62753 249 aaKnown RBP21.15■□□□□ 0.98
CLDND1-217ENST00000508071 TAP1Q03518 808 aa21.15■□□□□ 0.98
CLDND1-217ENST00000508071 COPS5Q92905 334 aa21.15■□□□□ 0.98
CLDND1-217ENST00000508071 TCP11L1Q9NUJ3 509 aa21.15■□□□□ 0.98
CLDND1-217ENST00000508071 BAIAP3O94812 1187 aa21.14■□□□□ 0.97
CLDND1-217ENST00000508071 PDHBP11177 359 aa21.14■□□□□ 0.97
CLDND1-217ENST00000508071 EDNRBP24530 442 aa21.14■□□□□ 0.97
CLDND1-217ENST00000508071 CCDC155Q8N6L0 562 aa21.14■□□□□ 0.97
CLDND1-217ENST00000508071 HELLSQ9NRZ9 838 aa21.14■□□□□ 0.97
CLDND1-217ENST00000508071 WDR19Q8NEZ3 1342 aa21.13■□□□□ 0.97
CLDND1-217ENST00000508071 KCNJ6P48051 423 aa21.13■□□□□ 0.97
CLDND1-217ENST00000508071 ZNF543Q08ER8 600 aa21.13■□□□□ 0.97
CLDND1-217ENST00000508071 KRT40Q6A162 431 aa21.13■□□□□ 0.97
CLDND1-217ENST00000508071 EVI5LQ96CN4 794 aa21.13■□□□□ 0.97
CLDND1-217ENST00000508071 ZBTB47Q9UFB7 747 aaPredicted RBP21.13■□□□□ 0.97
CLDND1-217ENST00000508071 TLL1O43897 1013 aa21.12■□□□□ 0.97
CLDND1-217ENST00000508071 ARHGEF15O94989 841 aa21.12■□□□□ 0.97
CLDND1-217ENST00000508071 FGAP02671 866 aa21.12■□□□□ 0.97
CLDND1-217ENST00000508071 PTGISQ16647 500 aa21.12■□□□□ 0.97
CLDND1-217ENST00000508071 CAGE1Q8TC20 777 aa21.12■□□□□ 0.97
CLDND1-217ENST00000508071 HLA-CQ95604 372 aa21.12■□□□□ 0.97
CLDND1-217ENST00000508071 PCDHB15Q9Y5E8 787 aa21.12■□□□□ 0.97
CLDND1-217ENST00000508071 GRB10Q13322 594 aa21.11■□□□□ 0.97
CLDND1-217ENST00000508071 AFAP1L1Q8TED9 768 aa21.11■□□□□ 0.97
CLDND1-217ENST00000508071 TTC14Q96N46 770 aa21.11■□□□□ 0.97
CLDND1-217ENST00000508071 PTPRSQ13332 1948 aa21.1■□□□□ 0.97
CLDND1-217ENST00000508071 ARIH2O95376 493 aa21.1■□□□□ 0.97
CLDND1-217ENST00000508071 USH1GQ495M9 461 aa21.1■□□□□ 0.97
CLDND1-217ENST00000508071 RGS22Q8NE09 1264 aa21.1■□□□□ 0.97
CLDND1-217ENST00000508071 BRWD1Q9NSI6 2320 aa21.1■□□□□ 0.97
CLDND1-217ENST00000508071 SALL3Q9BXA9 1300 aa21.09■□□□□ 0.97
CLDND1-217ENST00000508071 COL4A4P53420 1690 aaPredicted RBP21.09■□□□□ 0.97
CLDND1-217ENST00000508071 MCMDC2Q4G0Z9 681 aa21.09■□□□□ 0.97
CLDND1-217ENST00000508071 AFG1LQ8WV93 481 aa21.09■□□□□ 0.97
CLDND1-217ENST00000508071 ZBED2Q9BTP6 218 aa21.09■□□□□ 0.97
CLDND1-217ENST00000508071 GH1P01241 217 aa21.08■□□□□ 0.97
CLDND1-217ENST00000508071 MMP3P08254 477 aa21.08■□□□□ 0.97
CLDND1-217ENST00000508071 SNHG28P0DPA3 235 aa21.08■□□□□ 0.97
CLDND1-217ENST00000508071 SELPP16109 830 aa21.08■□□□□ 0.97
CLDND1-217ENST00000508071 HAND2P61296 217 aa21.08■□□□□ 0.97
CLDND1-217ENST00000508071 WDR5P61964 334 aaKnown RBP21.08■□□□□ 0.97
CLDND1-217ENST00000508071 GPATCH4Q5T3I0 446 aaKnown RBP21.08■□□□□ 0.97
CLDND1-217ENST00000508071 GDF6Q6KF10 455 aaPredicted RBP21.08■□□□□ 0.97
CLDND1-217ENST00000508071 CCDC62Q6P9F0 684 aa21.08■□□□□ 0.97
CLDND1-217ENST00000508071 MFSD6Q6ZSS7 791 aa21.08■□□□□ 0.97
CLDND1-217ENST00000508071 SEPT14Q6ZU15 432 aa21.08■□□□□ 0.97
CLDND1-217ENST00000508071 SESTD1Q86VW0 696 aa21.08■□□□□ 0.97
CLDND1-217ENST00000508071 FAM227BQ96M60 508 aa21.08■□□□□ 0.97
CLDND1-217ENST00000508071 EPHX3Q9H6B9 360 aa21.08■□□□□ 0.97
CLDND1-217ENST00000508071 ZMYM6O95789 1325 aa21.07■□□□□ 0.96
CLDND1-217ENST00000508071 A0A0D9SFI3 127 aa21.07■□□□□ 0.96
CLDND1-217ENST00000508071 LPXNO60711 386 aa21.07■□□□□ 0.96
CLDND1-217ENST00000508071 PARNO95453 639 aaKnown RBP21.07■□□□□ 0.96
CLDND1-217ENST00000508071 HSPD1P10809 573 aaKnown RBP21.07■□□□□ 0.96
CLDND1-217ENST00000508071 PCP11498 1178 aaKnown RBP21.07■□□□□ 0.96
CLDND1-217ENST00000508071 CASTP20810 708 aaKnown RBP21.07■□□□□ 0.96
CLDND1-217ENST00000508071 LY6KQ17RY6 165 aa21.07■□□□□ 0.96
CLDND1-217ENST00000508071 ANKRD45Q5TZF3 282 aa21.07■□□□□ 0.96
CLDND1-217ENST00000508071 LRRC8DQ7L1W4 858 aa21.07■□□□□ 0.96
CLDND1-217ENST00000508071 KIAA1217Q5T5P2 1943 aa21.07■□□□□ 0.96
CLDND1-217ENST00000508071 GOLGA8HP0CJ92 632 aa21.06■□□□□ 0.96
CLDND1-217ENST00000508071 ARHGAP1Q07960 439 aa21.06■□□□□ 0.96
CLDND1-217ENST00000508071 CNKSR3Q6P9H4 555 aa21.06■□□□□ 0.96
CLDND1-217ENST00000508071 CHST3Q7LGC8 479 aa21.06■□□□□ 0.96
CLDND1-217ENST00000508071 SPRED2Q7Z698 418 aa21.06■□□□□ 0.96
CLDND1-217ENST00000508071 NSUN6Q8TEA1 469 aaKnown RBP21.06■□□□□ 0.96
CLDND1-217ENST00000508071 CTAGE1Q96RT6 745 aa21.06■□□□□ 0.96
CLDND1-217ENST00000508071 LRFN3Q9BTN0 628 aa21.06■□□□□ 0.96
CLDND1-217ENST00000508071 MAF1Q9H063 256 aa21.06■□□□□ 0.96
CLDND1-217ENST00000508071 LMCD1Q9NZU5 365 aa21.06■□□□□ 0.96
CLDND1-217ENST00000508071 HCN4Q9Y3Q4 1203 aa21.06■□□□□ 0.96
CLDND1-217ENST00000508071 ABCB11O95342 1321 aa21.05■□□□□ 0.96
CLDND1-217ENST00000508071 LCHNA4D1U4 455 aa21.05■□□□□ 0.96
CLDND1-217ENST00000508071 STXBP2Q15833 593 aa21.05■□□□□ 0.96
CLDND1-217ENST00000508071 CDC37Q16543 378 aaPredicted RBP21.05■□□□□ 0.96
CLDND1-217ENST00000508071 DGKDQ16760 1214 aa21.05■□□□□ 0.96
CLDND1-217ENST00000508071 TMEM31Q5JXX7 168 aa21.05■□□□□ 0.96
CLDND1-217ENST00000508071 TMCO2Q7Z6W1 182 aaPredicted RBP21.05■□□□□ 0.96
CLDND1-217ENST00000508071 GDPD5Q8WTR4 605 aa21.05■□□□□ 0.96
CLDND1-217ENST00000508071 DHX38Q92620 1227 aaKnown RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms