RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 SAMD3Q8N6K7 520 aa18.04■□□□□ 0.48
CLDND1-211ENST00000506575 SCFD2Q8WU76 684 aa18.04■□□□□ 0.48
CLDND1-211ENST00000506575 IWS1Q96ST2 819 aa18.04■□□□□ 0.48
CLDND1-211ENST00000506575 SPZ1Q9BXG8 430 aa18.04■□□□□ 0.48
CLDND1-211ENST00000506575 UBE2OQ9C0C9 1292 aaKnown RBP18.04■□□□□ 0.48
CLDND1-211ENST00000506575 COL20A1Q9P218 1284 aa18.04■□□□□ 0.48
CLDND1-211ENST00000506575 A0A0U1RQG5 324 aaPredicted RBP18.03■□□□□ 0.48
CLDND1-211ENST00000506575 RBM47A0AV96 593 aaKnown RBP18.03■□□□□ 0.48
CLDND1-211ENST00000506575 CTAGE5O15320 804 aa18.03■□□□□ 0.48
CLDND1-211ENST00000506575 CABYRO75952 493 aa18.03■□□□□ 0.48
CLDND1-211ENST00000506575 EIF2AK2P19525 551 aaKnown RBP18.03■□□□□ 0.48
CLDND1-211ENST00000506575 RXRAP19793 462 aa18.03■□□□□ 0.48
CLDND1-211ENST00000506575 SMARCA1P28370 1054 aa18.03■□□□□ 0.48
CLDND1-211ENST00000506575 HSD17B4P51659 736 aa18.03■□□□□ 0.48
CLDND1-211ENST00000506575 MDM2Q00987 491 aaPredicted RBP18.03■□□□□ 0.48
CLDND1-211ENST00000506575 STXBP2Q15833 593 aa18.03■□□□□ 0.48
CLDND1-211ENST00000506575 SGMS1Q86VZ5 419 aa18.03■□□□□ 0.48
CLDND1-211ENST00000506575 PDLIM7Q9NR12 457 aa18.03■□□□□ 0.48
CLDND1-211ENST00000506575 MROH7Q68CQ1 1323 aa18.02■□□□□ 0.48
CLDND1-211ENST00000506575 DCDC2CA8MYV0 355 aa18.02■□□□□ 0.48
CLDND1-211ENST00000506575 GCOM1H8Y6P7 765 aaPredicted RBP18.02■□□□□ 0.48
CLDND1-211ENST00000506575 OPLAHO14841 1288 aa18.02■□□□□ 0.48
CLDND1-211ENST00000506575 NKRFO15226 690 aaKnown RBP eCLIP18.02■□□□□ 0.48
CLDND1-211ENST00000506575 CLTBP09497 229 aa18.02■□□□□ 0.48
CLDND1-211ENST00000506575 POLR2MP0CAP2 368 aa18.02■□□□□ 0.48
CLDND1-211ENST00000506575 PTGS1P23219 599 aa18.02■□□□□ 0.48
CLDND1-211ENST00000506575 FGD1P98174 961 aa18.02■□□□□ 0.48
CLDND1-211ENST00000506575 GHRHRQ02643 423 aa18.02■□□□□ 0.48
CLDND1-211ENST00000506575 TTLL4Q14679 1199 aa18.02■□□□□ 0.48
CLDND1-211ENST00000506575 ADCK5Q3MIX3 580 aa18.02■□□□□ 0.48
CLDND1-211ENST00000506575 BRDTQ58F21 947 aaPredicted RBP18.02■□□□□ 0.48
CLDND1-211ENST00000506575 TMEM63BQ5T3F8 832 aa18.02■□□□□ 0.48
CLDND1-211ENST00000506575 MICU3Q86XE3 530 aa18.02■□□□□ 0.48
CLDND1-211ENST00000506575 RAB11FIP4Q86YS3 637 aa18.02■□□□□ 0.48
CLDND1-211ENST00000506575 KIAA1217Q5T5P2 1943 aa18.02■□□□□ 0.47
CLDND1-211ENST00000506575 PLEKHA8P1O95397 391 aa18.01■□□□□ 0.47
CLDND1-211ENST00000506575 TXNP10599 105 aaKnown RBP18.01■□□□□ 0.47
CLDND1-211ENST00000506575 HOXA13P31271 388 aaPredicted RBP18.01■□□□□ 0.47
CLDND1-211ENST00000506575 CPT1AP50416 773 aa18.01■□□□□ 0.47
CLDND1-211ENST00000506575 FXR1P51114 621 aaKnown RBP eCLIP18.01■□□□□ 0.47
CLDND1-211ENST00000506575 EXOSC10Q01780 885 aaKnown RBP18.01■□□□□ 0.47
CLDND1-211ENST00000506575 CXCL17Q6UXB2 119 aa18.01■□□□□ 0.47
CLDND1-211ENST00000506575 FANCBQ8NB91 859 aa18.01■□□□□ 0.47
CLDND1-211ENST00000506575 OR6J1Q8NGC5 347 aa18.01■□□□□ 0.47
CLDND1-211ENST00000506575 TCEANC2Q96MN5 208 aa18.01■□□□□ 0.47
CLDND1-211ENST00000506575 TOX2Q96NM4 488 aa18.01■□□□□ 0.47
CLDND1-211ENST00000506575 PXMP2Q9NR77 195 aa18.01■□□□□ 0.47
CLDND1-211ENST00000506575 PCDH10Q9P2E7 1040 aa18.01■□□□□ 0.47
CLDND1-211ENST00000506575 LTBP2Q14767 1821 aa18■□□□□ 0.47
CLDND1-211ENST00000506575 ARVCFO00192 962 aa18■□□□□ 0.47
CLDND1-211ENST00000506575 NR3C2P08235 984 aa18■□□□□ 0.47
CLDND1-211ENST00000506575 HSPA4P34932 840 aa18■□□□□ 0.47
CLDND1-211ENST00000506575 APOA5Q6Q788 366 aa18■□□□□ 0.47
CLDND1-211ENST00000506575 SEPT14Q6ZU15 432 aa18■□□□□ 0.47
CLDND1-211ENST00000506575 ANKRD33Q7Z3H0 272 aa18■□□□□ 0.47
CLDND1-211ENST00000506575 CMTR1Q8N1G2 835 aaKnown RBP18■□□□□ 0.47
CLDND1-211ENST00000506575 SRBD1Q8N5C6 995 aaKnown RBP18■□□□□ 0.47
CLDND1-211ENST00000506575 TMEM39AQ9NV64 488 aa18■□□□□ 0.47
CLDND1-211ENST00000506575 POLR3EQ9NVU0 708 aa18■□□□□ 0.47
CLDND1-211ENST00000506575 TLR3O15455 904 aaKnown RBP17.99■□□□□ 0.47
CLDND1-211ENST00000506575 EIF3JO75822 258 aaKnown RBP17.99■□□□□ 0.47
CLDND1-211ENST00000506575 SLC34A2O95436 690 aa17.99■□□□□ 0.47
CLDND1-211ENST00000506575 MYCLP12524 364 aaPredicted RBP17.99■□□□□ 0.47
CLDND1-211ENST00000506575 SH3RF1Q7Z6J0 888 aa17.99■□□□□ 0.47
CLDND1-211ENST00000506575 FCHSD1Q86WN1 690 aa17.99■□□□□ 0.47
CLDND1-211ENST00000506575 TDHQ8IZJ6 230 aa17.99■□□□□ 0.47
CLDND1-211ENST00000506575 CCDC82Q8N4S0 544 aa17.99■□□□□ 0.47
CLDND1-211ENST00000506575 KCNB2Q92953 911 aa17.99■□□□□ 0.47
CLDND1-211ENST00000506575 CUL5Q93034 780 aa17.99■□□□□ 0.47
CLDND1-211ENST00000506575 JAKMIP1Q96N16 626 aaKnown RBP17.99■□□□□ 0.47
CLDND1-211ENST00000506575 RBM28Q9NW13 759 aaKnown RBP17.99■□□□□ 0.47
CLDND1-211ENST00000506575 NAP1L2Q9ULW6 460 aaPredicted RBP17.99■□□□□ 0.47
CLDND1-211ENST00000506575 SNX14Q9Y5W7 946 aa17.99■□□□□ 0.47
CLDND1-211ENST00000506575 TRIM43BA6NCK2 446 aa17.98■□□□□ 0.47
CLDND1-211ENST00000506575 ZBTB43O43298 467 aa17.98■□□□□ 0.47
CLDND1-211ENST00000506575 MYL3P08590 195 aa17.98■□□□□ 0.47
CLDND1-211ENST00000506575 RAG1P15918 1043 aa17.98■□□□□ 0.47
CLDND1-211ENST00000506575 CDK7P50613 346 aa17.98■□□□□ 0.47
CLDND1-211ENST00000506575 FAAP100Q0VG06 881 aa17.98■□□□□ 0.47
CLDND1-211ENST00000506575 BLOC1S2Q6QNY1 142 aa17.98■□□□□ 0.47
CLDND1-211ENST00000506575 TMTC3Q6ZXV5 915 aa17.98■□□□□ 0.47
CLDND1-211ENST00000506575 COPS5Q92905 334 aa17.98■□□□□ 0.47
CLDND1-211ENST00000506575 TRIM43Q96BQ3 446 aaPredicted RBP17.98■□□□□ 0.47
CLDND1-211ENST00000506575 PDCD2LQ9BRP1 358 aa17.98■□□□□ 0.47
CLDND1-211ENST00000506575 SEZ6LQ9BYH1 1024 aa17.98■□□□□ 0.47
CLDND1-211ENST00000506575 KLF18A0A0U1RQI7 1052 aa17.97■□□□□ 0.47
CLDND1-211ENST00000506575 KIAA0355O15063 1070 aa17.97■□□□□ 0.47
CLDND1-211ENST00000506575 EPB41L2O43491 1005 aaKnown RBP17.97■□□□□ 0.47
CLDND1-211ENST00000506575 ARIH2O95376 493 aa17.97■□□□□ 0.47
CLDND1-211ENST00000506575 PSMA5P28066 241 aa17.97■□□□□ 0.47
CLDND1-211ENST00000506575 CCND2P30279 289 aa17.97■□□□□ 0.47
CLDND1-211ENST00000506575 ITGA7Q13683 1181 aa17.97■□□□□ 0.47
CLDND1-211ENST00000506575 PGM5Q15124 567 aa17.97■□□□□ 0.47
CLDND1-211ENST00000506575 RTN1Q16799 776 aa17.97■□□□□ 0.47
CLDND1-211ENST00000506575 SMARCC2Q8TAQ2 1214 aa17.97■□□□□ 0.47
CLDND1-211ENST00000506575 BADQ92934 168 aa17.97■□□□□ 0.47
CLDND1-211ENST00000506575 BRPF3Q9ULD4 1205 aa17.97■□□□□ 0.47
CLDND1-211ENST00000506575 GOLGA8AA7E2F4 631 aa17.96■□□□□ 0.47
CLDND1-211ENST00000506575 GOLGA8BA8MQT2 603 aa17.96■□□□□ 0.47
CLDND1-211ENST00000506575 GH1P01241 217 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms