RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 RNF38Q9H0F5 515 aa8.52□□□□□ -1.05
MDM2-220ENST00000496959 EPB41L4AQ9HCS5 686 aaPredicted RBP8.52□□□□□ -1.05
MDM2-220ENST00000496959 MARCH2Q9P0N8 246 aa8.52□□□□□ -1.05
MDM2-220ENST00000496959 FBLN5Q9UBX5 448 aa8.52□□□□□ -1.05
MDM2-220ENST00000496959 KRTAP4-8A0A0G2JLE6 195 aa8.51□□□□□ -1.05
MDM2-220ENST00000496959 MEFVO15553 781 aaPredicted RBP8.51□□□□□ -1.05
MDM2-220ENST00000496959 ZBTB7AO95365 584 aa8.51□□□□□ -1.05
MDM2-220ENST00000496959 SCG5P05408 212 aa8.51□□□□□ -1.05
MDM2-220ENST00000496959 NCAM1P13591 858 aa8.51□□□□□ -1.05
MDM2-220ENST00000496959 DDR2Q16832 855 aa8.51□□□□□ -1.05
MDM2-220ENST00000496959 INF2Q27J81 1249 aa8.51□□□□□ -1.05
MDM2-220ENST00000496959 MBLAC2Q68D91 279 aa8.51□□□□□ -1.05
MDM2-220ENST00000496959 CELF2-AS1Q8N7Q2 184 aa8.51□□□□□ -1.05
MDM2-220ENST00000496959 PWWP2AQ96N64 755 aa8.51□□□□□ -1.05
MDM2-220ENST00000496959 BTG4Q9NY30 223 aa8.51□□□□□ -1.05
MDM2-220ENST00000496959 FAN1Q9Y2M0 1017 aa8.51□□□□□ -1.05
MDM2-220ENST00000496959 NTRK1P04629 796 aa8.5□□□□□ -1.05
MDM2-220ENST00000496959 BMP7P18075 431 aa8.5□□□□□ -1.05
MDM2-220ENST00000496959 IGFBP6P24592 240 aaPredicted RBP8.5□□□□□ -1.05
MDM2-220ENST00000496959 GTF2A2P52657 109 aa8.5□□□□□ -1.05
MDM2-220ENST00000496959 RPL11P62913 178 aaKnown RBP8.5□□□□□ -1.05
MDM2-220ENST00000496959 CYP4F3Q08477 520 aa8.5□□□□□ -1.05
MDM2-220ENST00000496959 KCNAB2Q13303 367 aa8.5□□□□□ -1.05
MDM2-220ENST00000496959 SLC10A6Q3KNW5 377 aa8.5□□□□□ -1.05
MDM2-220ENST00000496959 NAALADL2Q58DX5 795 aa8.5□□□□□ -1.05
MDM2-220ENST00000496959 TIMM13Q9Y5L4 95 aaPredicted RBP8.5□□□□□ -1.05
MDM2-220ENST00000496959 NISCHQ9Y2I1 1504 aa8.49□□□□□ -1.05
MDM2-220ENST00000496959 KLF4O43474 513 aa8.49□□□□□ -1.05
MDM2-220ENST00000496959 MYO1BO43795 1136 aa8.49□□□□□ -1.05
MDM2-220ENST00000496959 FBLN1P23142 703 aa8.49□□□□□ -1.05
MDM2-220ENST00000496959 ACBD5Q5T8D3 534 aaPredicted RBP8.49□□□□□ -1.05
MDM2-220ENST00000496959 DCP2Q8IU60 420 aaKnown RBP8.49□□□□□ -1.05
MDM2-220ENST00000496959 PLEKHO2Q8TD55 490 aa8.49□□□□□ -1.05
MDM2-220ENST00000496959 DPF3Q92784 378 aa8.49□□□□□ -1.05
MDM2-220ENST00000496959 C22orf46C9J442 243 aa8.48□□□□□ -1.05
MDM2-220ENST00000496959 STK10O94804 968 aaKnown RBP8.48□□□□□ -1.05
MDM2-220ENST00000496959 ASGR2P07307 311 aa8.48□□□□□ -1.05
MDM2-220ENST00000496959 LIMS1P48059 325 aa8.48□□□□□ -1.05
MDM2-220ENST00000496959 GFRA1P56159 465 aa8.48□□□□□ -1.05
MDM2-220ENST00000496959 FOXO4P98177 505 aa8.48□□□□□ -1.05
MDM2-220ENST00000496959 TEX2Q8IWB9 1127 aa8.48□□□□□ -1.05
MDM2-220ENST00000496959 PPIL6Q8IXY8 311 aa8.48□□□□□ -1.05
MDM2-220ENST00000496959 TRIM55Q9BYV6 548 aa8.48□□□□□ -1.05
MDM2-220ENST00000496959 TMEFF2Q9UIK5 374 aaPredicted RBP8.48□□□□□ -1.05
MDM2-220ENST00000496959 PLA2G2DQ9UNK4 145 aa8.48□□□□□ -1.05
MDM2-220ENST00000496959 INHBBP09529 407 aa8.47□□□□□ -1.05
MDM2-220ENST00000496959 ATF2P15336 505 aa8.47□□□□□ -1.05
MDM2-220ENST00000496959 PPP2R2AP63151 447 aa8.47□□□□□ -1.05
MDM2-220ENST00000496959 RAB33AQ14088 237 aa8.47□□□□□ -1.05
MDM2-220ENST00000496959 SF1Q15637 639 aaKnown RBP8.47□□□□□ -1.05
MDM2-220ENST00000496959 PRSS53Q2L4Q9 553 aa8.47□□□□□ -1.05
MDM2-220ENST00000496959 CKAP2LQ8IYA6 745 aa8.47□□□□□ -1.05
MDM2-220ENST00000496959 TMEM145Q8NBT3 493 aa8.47□□□□□ -1.05
MDM2-220ENST00000496959 KREMEN2Q8NCW0 462 aa8.47□□□□□ -1.05
MDM2-220ENST00000496959 AP5M1Q9H0R1 490 aa8.47□□□□□ -1.05
MDM2-220ENST00000496959 ZCCHC4Q9H5U6 513 aa8.47□□□□□ -1.05
MDM2-220ENST00000496959 RAPGEFL1Q9UHV5 662 aa8.47□□□□□ -1.05
MDM2-220ENST00000496959 A0A1W2PQU0 124 aa8.46□□□□□ -1.06
MDM2-220ENST00000496959 IQCA1LA6NCM1 817 aa8.46□□□□□ -1.06
MDM2-220ENST00000496959 PMLP29590 882 aa8.46□□□□□ -1.06
MDM2-220ENST00000496959 LTBRP36941 435 aa8.46□□□□□ -1.06
MDM2-220ENST00000496959 CAP1Q01518 475 aa8.46□□□□□ -1.06
MDM2-220ENST00000496959 TESK1Q15569 626 aa8.46□□□□□ -1.06
MDM2-220ENST00000496959 VMACQ2NL98 169 aa8.46□□□□□ -1.06
MDM2-220ENST00000496959 MROH9Q5TGP6 573 aa8.46□□□□□ -1.06
MDM2-220ENST00000496959 TTLL10Q6ZVT0 673 aa8.46□□□□□ -1.06
MDM2-220ENST00000496959 CEP68Q76N32 757 aa8.46□□□□□ -1.06
MDM2-220ENST00000496959 CCDC103Q8IW40 242 aa8.46□□□□□ -1.06
MDM2-220ENST00000496959 MARCH10Q8NA82 808 aaPredicted RBP8.46□□□□□ -1.06
MDM2-220ENST00000496959 KCTD13Q8WZ19 329 aa8.46□□□□□ -1.06
MDM2-220ENST00000496959 TRMT2BQ96GJ1 504 aaKnown RBP8.46□□□□□ -1.06
MDM2-220ENST00000496959 SGSM3Q96HU1 749 aa8.46□□□□□ -1.06
MDM2-220ENST00000496959 BCAS3Q9H6U6 928 aa8.46□□□□□ -1.06
MDM2-220ENST00000496959 PARD6AQ9NPB6 346 aa8.46□□□□□ -1.06
MDM2-220ENST00000496959 U2SURPO15042 1029 aaKnown RBP8.45□□□□□ -1.06
MDM2-220ENST00000496959 BCL6P41182 706 aa8.45□□□□□ -1.06
MDM2-220ENST00000496959 HSP90AA2PQ14568 343 aaPredicted RBP8.45□□□□□ -1.06
MDM2-220ENST00000496959 LINC01356Q8N9X3 169 aa8.45□□□□□ -1.06
MDM2-220ENST00000496959 TMEM169Q96HH4 297 aa8.45□□□□□ -1.06
MDM2-220ENST00000496959 PPP1R1BQ9UD71 204 aaPredicted RBP8.45□□□□□ -1.06
MDM2-220ENST00000496959 SIT1Q9Y3P8 196 aa8.45□□□□□ -1.06
MDM2-220ENST00000496959 PMF1-BGLAPU3KQ54 211 aa8.45□□□□□ -1.06
MDM2-220ENST00000496959 ARNTLO00327 626 aa8.44□□□□□ -1.06
MDM2-220ENST00000496959 TRIM13O60858 407 aa8.44□□□□□ -1.06
MDM2-220ENST00000496959 SASH1O94885 1247 aa8.44□□□□□ -1.06
MDM2-220ENST00000496959 CAPNS1P04632 268 aa8.44□□□□□ -1.06
MDM2-220ENST00000496959 ATP2B1P20020 1258 aa8.44□□□□□ -1.06
MDM2-220ENST00000496959 FPR2P25090 351 aa8.44□□□□□ -1.06
MDM2-220ENST00000496959 MC3RP41968 323 aa8.44□□□□□ -1.06
MDM2-220ENST00000496959 MAP4K2Q12851 820 aa8.44□□□□□ -1.06
MDM2-220ENST00000496959 B3GNT8Q7Z7M8 397 aa8.44□□□□□ -1.06
MDM2-220ENST00000496959 RIOX2Q8IUF8 465 aa8.44□□□□□ -1.06
MDM2-220ENST00000496959 RCBTB1Q8NDN9 531 aa8.44□□□□□ -1.06
MDM2-220ENST00000496959 ST13P5Q8NFI4 369 aaPredicted RBP8.44□□□□□ -1.06
MDM2-220ENST00000496959 CPA5Q8WXQ8 436 aa8.44□□□□□ -1.06
MDM2-220ENST00000496959 SEC14L1Q92503 715 aa8.44□□□□□ -1.06
MDM2-220ENST00000496959 CHAMP1Q96JM3 812 aa8.44□□□□□ -1.06
MDM2-220ENST00000496959 KCNC2Q96PR1 638 aa8.44□□□□□ -1.06
MDM2-220ENST00000496959 TANGO6Q9C0B7 1094 aa8.44□□□□□ -1.06
MDM2-220ENST00000496959 COA3Q9Y2R0 106 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms