RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 PPP1R12BO60237 982 aaPredicted RBP23.83■■□□□ 1.41
FGFR1-223ENST00000496296 SERPINC1P01008 464 aa23.83■■□□□ 1.41
FGFR1-223ENST00000496296 SFPQP23246 707 aaKnown RBP eCLIP23.83■■□□□ 1.41
FGFR1-223ENST00000496296 BACE1P56817 501 aa23.83■■□□□ 1.41
FGFR1-223ENST00000496296 PDXDC2PQ6P474 469 aa23.83■■□□□ 1.41
FGFR1-223ENST00000496296 CCDC174Q6PII3 467 aa23.83■■□□□ 1.41
FGFR1-223ENST00000496296 PRPF38AQ8NAV1 312 aaKnown RBP23.83■■□□□ 1.41
FGFR1-223ENST00000496296 SLF1Q9BQI6 1058 aa23.83■■□□□ 1.41
FGFR1-223ENST00000496296 ZHX2Q9Y6X8 837 aa23.83■■□□□ 1.41
FGFR1-223ENST00000496296 SAMD1Q6SPF0 538 aaPredicted RBP23.83■■□□□ 1.4
FGFR1-223ENST00000496296 MTERF4Q7Z6M4 381 aaKnown RBP23.83■■□□□ 1.4
FGFR1-223ENST00000496296 CCAR2Q8N163 923 aaKnown RBP23.83■■□□□ 1.4
FGFR1-223ENST00000496296 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.83■■□□□ 1.4
FGFR1-223ENST00000496296 MED15Q96RN5 788 aa23.83■■□□□ 1.4
FGFR1-223ENST00000496296 TANGO6Q9C0B7 1094 aa23.83■■□□□ 1.4
FGFR1-223ENST00000496296 FZD1Q9UP38 647 aa23.83■■□□□ 1.4
FGFR1-223ENST00000496296 USP17L15C9J2P7 530 aa23.82■■□□□ 1.4
FGFR1-223ENST00000496296 C19orf81C9J6K1 198 aa23.82■■□□□ 1.4
FGFR1-223ENST00000496296 USP17L13C9JLJ4 530 aa23.82■■□□□ 1.4
FGFR1-223ENST00000496296 ADM5C9JUS6 153 aa23.82■■□□□ 1.4
FGFR1-223ENST00000496296 USP17L11C9JVI0 530 aa23.82■■□□□ 1.4
FGFR1-223ENST00000496296 USP17L18D6R9N7 530 aa23.82■■□□□ 1.4
FGFR1-223ENST00000496296 USP17L22D6RA61 530 aa23.82■■□□□ 1.4
FGFR1-223ENST00000496296 USP17L17D6RBQ6 530 aa23.82■■□□□ 1.4
FGFR1-223ENST00000496296 USP17L19D6RCP7 530 aa23.82■■□□□ 1.4
FGFR1-223ENST00000496296 USP17L20D6RJB6 530 aa23.82■■□□□ 1.4
FGFR1-223ENST00000496296 USP2O75604 605 aaPredicted RBP23.82■■□□□ 1.4
FGFR1-223ENST00000496296 NF2P35240 595 aa23.82■■□□□ 1.4
FGFR1-223ENST00000496296 USP17L24Q0WX57 530 aa23.82■■□□□ 1.4
FGFR1-223ENST00000496296 CUL4BQ13620 913 aa23.82■■□□□ 1.4
FGFR1-223ENST00000496296 PRKG1Q13976 671 aa23.82■■□□□ 1.4
FGFR1-223ENST00000496296 TPD52L1Q16890 204 aaPredicted RBP23.82■■□□□ 1.4
FGFR1-223ENST00000496296 USP17L6PQ6QN14 398 aa23.82■■□□□ 1.4
FGFR1-223ENST00000496296 CCDC112Q8NEF3 446 aa23.82■■□□□ 1.4
FGFR1-223ENST00000496296 NFE2L3Q9Y4A8 694 aa23.82■■□□□ 1.4
FGFR1-223ENST00000496296 PAXBP1Q9Y5B6 917 aa23.82■■□□□ 1.4
FGFR1-223ENST00000496296 FOSP01100 380 aaPredicted RBP23.81■■□□□ 1.4
FGFR1-223ENST00000496296 OR52Z1P0C646 297 aa23.81■■□□□ 1.4
FGFR1-223ENST00000496296 TNNT1P13805 278 aa23.81■■□□□ 1.4
FGFR1-223ENST00000496296 VCAM1P19320 739 aa23.81■■□□□ 1.4
FGFR1-223ENST00000496296 TXLNAP40222 546 aa23.81■■□□□ 1.4
FGFR1-223ENST00000496296 TMX1Q9H3N1 280 aa23.81■■□□□ 1.4
FGFR1-223ENST00000496296 EMILIN3Q9NT22 766 aa23.81■■□□□ 1.4
FGFR1-223ENST00000496296 FBXO28Q9NVF7 368 aa23.81■■□□□ 1.4
FGFR1-223ENST00000496296 INTS13Q9NVM9 706 aa23.81■■□□□ 1.4
FGFR1-223ENST00000496296 MRPL11Q9Y3B7 192 aaKnown RBP23.81■■□□□ 1.4
FGFR1-223ENST00000496296 MEIS2O14770 477 aa23.81■■□□□ 1.4
FGFR1-223ENST00000496296 NRDCO43847 1150 aa23.81■■□□□ 1.4
FGFR1-223ENST00000496296 POLR2AP24928 1970 aaKnown RBP23.8■■□□□ 1.4
FGFR1-223ENST00000496296 SPDYE3A6NKU9 549 aa23.8■■□□□ 1.4
FGFR1-223ENST00000496296 KIF2AO00139 706 aaPredicted RBP23.8■■□□□ 1.4
FGFR1-223ENST00000496296 GTPBP6O43824 516 aaPredicted RBP23.8■■□□□ 1.4
FGFR1-223ENST00000496296 GCFC2P16383 781 aaKnown RBP23.8■■□□□ 1.4
FGFR1-223ENST00000496296 MAP3K9P80192 1104 aa23.8■■□□□ 1.4
FGFR1-223ENST00000496296 TBX2Q13207 712 aaPredicted RBP23.8■■□□□ 1.4
FGFR1-223ENST00000496296 SEMA3FQ13275 785 aa23.8■■□□□ 1.4
FGFR1-223ENST00000496296 PPP4R3AQ6IN85 833 aa23.8■■□□□ 1.4
FGFR1-223ENST00000496296 C16orf45Q96MC5 204 aaPredicted RBP23.8■■□□□ 1.4
FGFR1-223ENST00000496296 ANO3Q9BYT9 981 aa23.8■■□□□ 1.4
FGFR1-223ENST00000496296 TMEM60Q9H2L4 133 aa23.8■■□□□ 1.4
FGFR1-223ENST00000496296 RPAP3Q9H6T3 665 aaPredicted RBP23.8■■□□□ 1.4
FGFR1-223ENST00000496296 NMRK2Q9NPI5 230 aa23.8■■□□□ 1.4
FGFR1-223ENST00000496296 ABCB11O95342 1321 aa23.8■■□□□ 1.4
FGFR1-223ENST00000496296 FLOT1O75955 427 aa23.79■■□□□ 1.4
FGFR1-223ENST00000496296 IREB2P48200 963 aaKnown RBP23.79■■□□□ 1.4
FGFR1-223ENST00000496296 SPATA1Q5VX52 437 aa23.79■■□□□ 1.4
FGFR1-223ENST00000496296 CTDP1Q9Y5B0 961 aaPredicted RBP23.79■■□□□ 1.4
FGFR1-223ENST00000496296 CSADQ9Y600 493 aa23.79■■□□□ 1.4
FGFR1-223ENST00000496296 PIK3CDO00329 1044 aa23.79■■□□□ 1.4
FGFR1-223ENST00000496296 USP11P51784 963 aa23.79■■□□□ 1.4
FGFR1-223ENST00000496296 PNMA8AQ86V59 439 aaPredicted RBP23.79■■□□□ 1.4
FGFR1-223ENST00000496296 PNMA2Q9UL42 364 aa23.79■■□□□ 1.4
FGFR1-223ENST00000496296 RIOK3O14730 519 aaKnown RBP23.78■■□□□ 1.4
FGFR1-223ENST00000496296 CTIFO43310 598 aaKnown RBP23.78■■□□□ 1.4
FGFR1-223ENST00000496296 FDX1P10109 184 aa23.78■■□□□ 1.4
FGFR1-223ENST00000496296 AFMP43652 599 aa23.78■■□□□ 1.4
FGFR1-223ENST00000496296 CALCRLQ16602 461 aa23.78■■□□□ 1.4
FGFR1-223ENST00000496296 EAPPQ56P03 285 aaPredicted RBP23.78■■□□□ 1.4
FGFR1-223ENST00000496296 C12orf42Q96LP6 360 aa23.78■■□□□ 1.4
FGFR1-223ENST00000496296 AK8Q96MA6 479 aa23.78■■□□□ 1.4
FGFR1-223ENST00000496296 CCSER1Q9C0I3 900 aa23.78■■□□□ 1.4
FGFR1-223ENST00000496296 TAF1DQ9H5J8 278 aaPredicted RBP23.78■■□□□ 1.4
FGFR1-223ENST00000496296 TMOD4Q9NZQ9 345 aa23.78■■□□□ 1.4
FGFR1-223ENST00000496296 USP27XA6NNY8 438 aa23.77■■□□□ 1.4
FGFR1-223ENST00000496296 PPP1R3GB7ZBB8 358 aa23.77■■□□□ 1.4
FGFR1-223ENST00000496296 TUBB4AP04350 444 aa23.77■■□□□ 1.4
FGFR1-223ENST00000496296 ICAM1P05362 532 aa23.77■■□□□ 1.4
FGFR1-223ENST00000496296 LDHDQ86WU2 507 aa23.77■■□□□ 1.4
FGFR1-223ENST00000496296 PPP1R9AQ9ULJ8 1098 aa23.77■■□□□ 1.4
FGFR1-223ENST00000496296 TDP2O95551 362 aa23.77■■□□□ 1.4
FGFR1-223ENST00000496296 DGKZQ13574 1117 aa23.77■■□□□ 1.4
FGFR1-223ENST00000496296 CDKAL1Q5VV42 579 aa23.77■■□□□ 1.4
FGFR1-223ENST00000496296 E4F1Q66K89 784 aaPredicted RBP23.77■■□□□ 1.4
FGFR1-223ENST00000496296 POTEDQ86YR6 584 aa23.77■■□□□ 1.4
FGFR1-223ENST00000496296 RBM46Q8TBY0 533 aaKnown RBP23.77■■□□□ 1.4
FGFR1-223ENST00000496296 DDX25Q9UHL0 483 aaKnown RBP23.77■■□□□ 1.4
FGFR1-223ENST00000496296 CCPG1Q9ULG6 757 aa23.77■■□□□ 1.4
FGFR1-223ENST00000496296 SCN4AP35499 1836 aa23.76■■□□□ 1.39
FGFR1-223ENST00000496296 A0A1B0GTH6 734 aa23.76■■□□□ 1.39
FGFR1-223ENST00000496296 GCOM1H8Y6P7 765 aaPredicted RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 356.1 ms