RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 PIK3CDO00329 1044 aa15.59■□□□□ 0.09
COL1A1-208ENST00000494334 AKR1A1P14550 325 aa15.59■□□□□ 0.09
COL1A1-208ENST00000494334 EIF2AK2P19525 551 aaKnown RBP15.59■□□□□ 0.09
COL1A1-208ENST00000494334 RGS19P49795 217 aa15.59■□□□□ 0.09
COL1A1-208ENST00000494334 NAPAP54920 295 aa15.59■□□□□ 0.09
COL1A1-208ENST00000494334 SSRP1Q08945 709 aaKnown RBP15.59■□□□□ 0.09
COL1A1-208ENST00000494334 ARHGEF16Q5VV41 709 aa15.59■□□□□ 0.09
COL1A1-208ENST00000494334 TAPT1Q6NXT6 567 aa15.59■□□□□ 0.09
COL1A1-208ENST00000494334 PPP1R18Q6NYC8 613 aa15.59■□□□□ 0.09
COL1A1-208ENST00000494334 FBXO16Q8IX29 292 aaPredicted RBP15.59■□□□□ 0.09
COL1A1-208ENST00000494334 NECAB1Q8N987 351 aa15.59■□□□□ 0.09
COL1A1-208ENST00000494334 SMARCC2Q8TAQ2 1214 aa15.59■□□□□ 0.09
COL1A1-208ENST00000494334 CUL5Q93034 780 aa15.59■□□□□ 0.09
COL1A1-208ENST00000494334 MPHOSPH6Q99547 160 aaKnown RBP15.59■□□□□ 0.09
COL1A1-208ENST00000494334 PXMP2Q9NR77 195 aa15.59■□□□□ 0.09
COL1A1-208ENST00000494334 FAM184BQ9ULE4 1060 aa15.59■□□□□ 0.09
COL1A1-208ENST00000494334 SMCO2A6NFE2 343 aa15.58■□□□□ 0.08
COL1A1-208ENST00000494334 B4DLN1 442 aa15.58■□□□□ 0.08
COL1A1-208ENST00000494334 CTDNEP1O95476 244 aa15.58■□□□□ 0.08
COL1A1-208ENST00000494334 CAPN2P17655 700 aa15.58■□□□□ 0.08
COL1A1-208ENST00000494334 MRPL12P52815 198 aaKnown RBP15.58■□□□□ 0.08
COL1A1-208ENST00000494334 PDE4DQ08499 809 aa15.58■□□□□ 0.08
COL1A1-208ENST00000494334 CCDC144BQ3MJ40 725 aa15.58■□□□□ 0.08
COL1A1-208ENST00000494334 TRIM22Q8IYM9 498 aa15.58■□□□□ 0.08
COL1A1-208ENST00000494334 GTF3C6Q969F1 213 aa15.58■□□□□ 0.08
COL1A1-208ENST00000494334 IWS1Q96ST2 819 aa15.58■□□□□ 0.08
COL1A1-208ENST00000494334 PDCD2LQ9BRP1 358 aa15.58■□□□□ 0.08
COL1A1-208ENST00000494334 VTA1Q9NP79 307 aa15.58■□□□□ 0.08
COL1A1-208ENST00000494334 PDGFCQ9NRA1 345 aa15.58■□□□□ 0.08
COL1A1-208ENST00000494334 LIMCH1Q9UPQ0 1083 aa15.58■□□□□ 0.08
COL1A1-208ENST00000494334 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.57■□□□□ 0.08
COL1A1-208ENST00000494334 ADCY6O43306 1168 aa15.57■□□□□ 0.08
COL1A1-208ENST00000494334 DTNBO60941 627 aa15.57■□□□□ 0.08
COL1A1-208ENST00000494334 CDKL5O76039 1030 aa15.57■□□□□ 0.08
COL1A1-208ENST00000494334 DEXIO95424 95 aa15.57■□□□□ 0.08
COL1A1-208ENST00000494334 NR3C2P08235 984 aa15.57■□□□□ 0.08
COL1A1-208ENST00000494334 ADCYAP1R1P41586 468 aa15.57■□□□□ 0.08
COL1A1-208ENST00000494334 ST3GAL1Q11201 340 aa15.57■□□□□ 0.08
COL1A1-208ENST00000494334 PGM5Q15124 567 aa15.57■□□□□ 0.08
COL1A1-208ENST00000494334 STXBP2Q15833 593 aa15.57■□□□□ 0.08
COL1A1-208ENST00000494334 UBE2SQ16763 222 aa15.57■□□□□ 0.08
COL1A1-208ENST00000494334 LENG1Q96BZ8 264 aaPredicted RBP15.57■□□□□ 0.08
COL1A1-208ENST00000494334 RIC8AQ9NPQ8 531 aa15.57■□□□□ 0.08
COL1A1-208ENST00000494334 RBM47A0AV96 593 aaKnown RBP15.56■□□□□ 0.08
COL1A1-208ENST00000494334 RARBP10826 455 aa15.56■□□□□ 0.08
COL1A1-208ENST00000494334 MNX1P50219 401 aaPredicted RBP15.56■□□□□ 0.08
COL1A1-208ENST00000494334 IQSEC1Q6DN90 963 aa15.56■□□□□ 0.08
COL1A1-208ENST00000494334 VSIG10LQ86VR7 867 aa15.56■□□□□ 0.08
COL1A1-208ENST00000494334 ANKLE1Q8NAG6 615 aa15.56■□□□□ 0.08
COL1A1-208ENST00000494334 IL27Q8NEV9 243 aa15.56■□□□□ 0.08
COL1A1-208ENST00000494334 ZMYND12Q9H0C1 365 aa15.56■□□□□ 0.08
COL1A1-208ENST00000494334 FRMPD4Q14CM0 1322 aa15.55■□□□□ 0.08
COL1A1-208ENST00000494334 ESYT2A0FGR8 921 aa15.55■□□□□ 0.08
COL1A1-208ENST00000494334 ST18O60284 1047 aa15.55■□□□□ 0.08
COL1A1-208ENST00000494334 DUSP11O75319 330 aaKnown RBP15.55■□□□□ 0.08
COL1A1-208ENST00000494334 MYCLP12524 364 aaPredicted RBP15.55■□□□□ 0.08
COL1A1-208ENST00000494334 SMPD1P17405 629 aa15.55■□□□□ 0.08
COL1A1-208ENST00000494334 ADCY7P51828 1080 aa15.55■□□□□ 0.08
COL1A1-208ENST00000494334 TNFAIP2Q03169 654 aa15.55■□□□□ 0.08
COL1A1-208ENST00000494334 TMEM63BQ5T3F8 832 aa15.55■□□□□ 0.08
COL1A1-208ENST00000494334 UBE2Q1Q7Z7E8 422 aa15.55■□□□□ 0.08
COL1A1-208ENST00000494334 TEX2Q8IWB9 1127 aa15.55■□□□□ 0.08
COL1A1-208ENST00000494334 IL31RAQ8NI17 732 aa15.55■□□□□ 0.08
COL1A1-208ENST00000494334 CCDC12Q8WUD4 166 aaPredicted RBP15.55■□□□□ 0.08
COL1A1-208ENST00000494334 ZSCAN31Q96LW9 406 aaPredicted RBP15.55■□□□□ 0.08
COL1A1-208ENST00000494334 AIFM3Q96NN9 605 aa15.55■□□□□ 0.08
COL1A1-208ENST00000494334 GLT8D2Q9H1C3 349 aa15.55■□□□□ 0.08
COL1A1-208ENST00000494334 XPNPEP3Q9NQH7 507 aa15.55■□□□□ 0.08
COL1A1-208ENST00000494334 VPS54Q9P1Q0 977 aa15.55■□□□□ 0.08
COL1A1-208ENST00000494334 PCDHA6Q9UN73 950 aa15.55■□□□□ 0.08
COL1A1-208ENST00000494334 GNEQ9Y223 722 aaKnown RBP15.55■□□□□ 0.08
COL1A1-208ENST00000494334 PCDHA8Q9Y5H6 950 aa15.55■□□□□ 0.08
COL1A1-208ENST00000494334 RBBP6Q7Z6E9 1792 aaKnown RBP15.54■□□□□ 0.08
COL1A1-208ENST00000494334 STK36Q9NRP7 1315 aa15.54■□□□□ 0.08
COL1A1-208ENST00000494334 ADAMTS3O15072 1205 aa15.54■□□□□ 0.08
COL1A1-208ENST00000494334 EIF3JO75822 258 aaKnown RBP15.54■□□□□ 0.08
COL1A1-208ENST00000494334 FARP2O94887 1054 aaPredicted RBP15.54■□□□□ 0.08
COL1A1-208ENST00000494334 CD2BP2O95400 341 aaKnown RBP15.54■□□□□ 0.08
COL1A1-208ENST00000494334 PGK1P00558 417 aa15.54■□□□□ 0.08
COL1A1-208ENST00000494334 FDPSP14324 419 aaKnown RBP15.54■□□□□ 0.08
COL1A1-208ENST00000494334 CLK2P49760 499 aaKnown RBP15.54■□□□□ 0.08
COL1A1-208ENST00000494334 SEPT14Q6ZU15 432 aa15.54■□□□□ 0.08
COL1A1-208ENST00000494334 CCDC83Q8IWF9 413 aa15.54■□□□□ 0.08
COL1A1-208ENST00000494334 ARRDC4Q8NCT1 418 aa15.54■□□□□ 0.08
COL1A1-208ENST00000494334 NSUN7Q8NE18 718 aaKnown RBP15.54■□□□□ 0.08
COL1A1-208ENST00000494334 DIS3LQ8TF46 1054 aaKnown RBP15.54■□□□□ 0.08
COL1A1-208ENST00000494334 ZFP91Q96JP5 570 aaPredicted RBP15.54■□□□□ 0.08
COL1A1-208ENST00000494334 WDR11Q9BZH6 1224 aa15.54■□□□□ 0.08
COL1A1-208ENST00000494334 C6orf50Q9HD87 102 aa15.54■□□□□ 0.08
COL1A1-208ENST00000494334 SH3GLB2Q9NR46 395 aa15.54■□□□□ 0.08
COL1A1-208ENST00000494334 MCM3APO60318 1980 aa15.54■□□□□ 0.08
COL1A1-208ENST00000494334 SPDYE3A6NKU9 549 aa15.53■□□□□ 0.08
COL1A1-208ENST00000494334 ADAMTS4O75173 837 aa15.53■□□□□ 0.08
COL1A1-208ENST00000494334 RGS20O76081 388 aa15.53■□□□□ 0.08
COL1A1-208ENST00000494334 PTGS1P23219 599 aa15.53■□□□□ 0.08
COL1A1-208ENST00000494334 GNA11P29992 359 aa15.53■□□□□ 0.08
COL1A1-208ENST00000494334 CCND2P30279 289 aa15.53■□□□□ 0.08
COL1A1-208ENST00000494334 MRPS9P82933 396 aaKnown RBP15.53■□□□□ 0.08
COL1A1-208ENST00000494334 LRRC41Q15345 812 aa15.53■□□□□ 0.08
COL1A1-208ENST00000494334 DUSP28Q4G0W2 176 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms