RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 TMEM240Q5SV17 173 aa15.22■□□□□ 0.03
ATPAF2-207ENST00000488753 CYB5R4Q7L1T6 521 aa15.22■□□□□ 0.03
ATPAF2-207ENST00000488753 C16orf59Q7L2K0 433 aa15.22■□□□□ 0.03
ATPAF2-207ENST00000488753 FAM161BQ96MY7 647 aa15.22■□□□□ 0.03
ATPAF2-207ENST00000488753 MTG1Q9BT17 334 aaPredicted RBP15.22■□□□□ 0.03
ATPAF2-207ENST00000488753 PPP1R12CQ9BZL4 782 aa15.22■□□□□ 0.03
ATPAF2-207ENST00000488753 MAP3K20Q9NYL2 800 aaKnown RBP15.22■□□□□ 0.03
ATPAF2-207ENST00000488753 A0A0C4DFX4 3053 aa15.21■□□□□ 0.03
ATPAF2-207ENST00000488753 PALM3A6NDB9 673 aaPredicted RBP15.21■□□□□ 0.03
ATPAF2-207ENST00000488753 ZBTB5O15062 677 aa15.21■□□□□ 0.03
ATPAF2-207ENST00000488753 CYP2C18P33260 490 aa15.21■□□□□ 0.03
ATPAF2-207ENST00000488753 STXBP2Q15833 593 aa15.21■□□□□ 0.03
ATPAF2-207ENST00000488753 NFRKBQ6P4R8 1299 aa15.21■□□□□ 0.03
ATPAF2-207ENST00000488753 CCDC62Q6P9F0 684 aa15.21■□□□□ 0.03
ATPAF2-207ENST00000488753 RALYLQ86SE5 291 aaKnown RBP15.21■□□□□ 0.03
ATPAF2-207ENST00000488753 STAG2Q8N3U4 1231 aa15.21■□□□□ 0.03
ATPAF2-207ENST00000488753 NCOA7Q8NI08 942 aa15.21■□□□□ 0.03
ATPAF2-207ENST00000488753 TAAR1Q96RJ0 339 aa15.21■□□□□ 0.03
ATPAF2-207ENST00000488753 RMDN3Q96TC7 470 aa15.21■□□□□ 0.03
ATPAF2-207ENST00000488753 CDX2Q99626 313 aaPredicted RBP15.21■□□□□ 0.03
ATPAF2-207ENST00000488753 NOC4LQ9BVI4 516 aaKnown RBP15.21■□□□□ 0.03
ATPAF2-207ENST00000488753 TRPV6Q9H1D0 765 aa15.21■□□□□ 0.03
ATPAF2-207ENST00000488753 MTIF3Q9H2K0 278 aaKnown RBP15.21■□□□□ 0.03
ATPAF2-207ENST00000488753 TTYH1Q9H313 450 aaPredicted RBP15.21■□□□□ 0.03
ATPAF2-207ENST00000488753 VAT1LQ9HCJ6 419 aa15.21■□□□□ 0.03
ATPAF2-207ENST00000488753 IL23AQ9NPF7 189 aa15.21■□□□□ 0.03
ATPAF2-207ENST00000488753 MAD2L2Q9UI95 211 aa15.21■□□□□ 0.03
ATPAF2-207ENST00000488753 IFIT3O14879 490 aaKnown RBP15.2■□□□□ 0.02
ATPAF2-207ENST00000488753 MYL3P08590 195 aa15.2■□□□□ 0.02
ATPAF2-207ENST00000488753 DNAJB2P25686 324 aa15.2■□□□□ 0.02
ATPAF2-207ENST00000488753 HSD17B4P51659 736 aa15.2■□□□□ 0.02
ATPAF2-207ENST00000488753 IRX6P78412 446 aaPredicted RBP15.2■□□□□ 0.02
ATPAF2-207ENST00000488753 PTPN11Q06124 597 aaPredicted RBP15.2■□□□□ 0.02
ATPAF2-207ENST00000488753 GRM4Q14833 912 aa15.2■□□□□ 0.02
ATPAF2-207ENST00000488753 ZNF365Q70YC5 407 aa15.2■□□□□ 0.02
ATPAF2-207ENST00000488753 HERVK_113Q902F9 699 aa15.2■□□□□ 0.02
ATPAF2-207ENST00000488753 TBC1D5Q92609 795 aa15.2■□□□□ 0.02
ATPAF2-207ENST00000488753 MAP4K1Q92918 833 aa15.2■□□□□ 0.02
ATPAF2-207ENST00000488753 COL20A1Q9P218 1284 aa15.2■□□□□ 0.02
ATPAF2-207ENST00000488753 E7EWF7 191 aa15.19■□□□□ 0.02
ATPAF2-207ENST00000488753 OPLAHO14841 1288 aa15.19■□□□□ 0.02
ATPAF2-207ENST00000488753 EIF3JO75822 258 aaKnown RBP15.19■□□□□ 0.02
ATPAF2-207ENST00000488753 ARIH2O95376 493 aa15.19■□□□□ 0.02
ATPAF2-207ENST00000488753 WTAPQ15007 396 aa15.19■□□□□ 0.02
ATPAF2-207ENST00000488753 ARHGEF16Q5VV41 709 aa15.19■□□□□ 0.02
ATPAF2-207ENST00000488753 RPUSD2Q8IZ73 545 aaKnown RBP15.19■□□□□ 0.02
ATPAF2-207ENST00000488753 MTA3Q9BTC8 594 aa15.19■□□□□ 0.02
ATPAF2-207ENST00000488753 RIOX1Q9H6W3 641 aa15.19■□□□□ 0.02
ATPAF2-207ENST00000488753 PXMP2Q9NR77 195 aa15.19■□□□□ 0.02
ATPAF2-207ENST00000488753 CFBP00751 764 aa15.18■□□□□ 0.02
ATPAF2-207ENST00000488753 GH1P01241 217 aa15.18■□□□□ 0.02
ATPAF2-207ENST00000488753 FGBP02675 491 aa15.18■□□□□ 0.02
ATPAF2-207ENST00000488753 NR3C2P08235 984 aa15.18■□□□□ 0.02
ATPAF2-207ENST00000488753 PFKMP08237 780 aa15.18■□□□□ 0.02
ATPAF2-207ENST00000488753 ACRP10323 421 aa15.18■□□□□ 0.02
ATPAF2-207ENST00000488753 TROAPQ12815 778 aa15.18■□□□□ 0.02
ATPAF2-207ENST00000488753 NBPF20Q3BBV1 942 aa15.18■□□□□ 0.02
ATPAF2-207ENST00000488753 COPS5Q92905 334 aa15.18■□□□□ 0.02
ATPAF2-207ENST00000488753 EMID1Q96A84 441 aaPredicted RBP15.18■□□□□ 0.02
ATPAF2-207ENST00000488753 TIFAQ96CG3 184 aa15.18■□□□□ 0.02
ATPAF2-207ENST00000488753 WNT8AQ9H1J5 351 aa15.18■□□□□ 0.02
ATPAF2-207ENST00000488753 PCDHA1Q9Y5I3 950 aa15.18■□□□□ 0.02
ATPAF2-207ENST00000488753 UMODL1Q5DID0 1318 aa15.17■□□□□ 0.02
ATPAF2-207ENST00000488753 PPP1R11O60927 126 aaPredicted RBP15.17■□□□□ 0.02
ATPAF2-207ENST00000488753 EIF2AK2P19525 551 aaKnown RBP15.17■□□□□ 0.02
ATPAF2-207ENST00000488753 CCL23P55773 120 aa15.17■□□□□ 0.02
ATPAF2-207ENST00000488753 SEPT14Q6ZU15 432 aa15.17■□□□□ 0.02
ATPAF2-207ENST00000488753 STOX1Q6ZVD7 989 aa15.17■□□□□ 0.02
ATPAF2-207ENST00000488753 CATIPQ7Z7H3 387 aa15.17■□□□□ 0.02
ATPAF2-207ENST00000488753 MAP3K14Q99558 947 aa15.17■□□□□ 0.02
ATPAF2-207ENST00000488753 TRMT13Q9NUP7 481 aaKnown RBP15.17■□□□□ 0.02
ATPAF2-207ENST00000488753 UNC80Q8N2C7 3258 aa15.17■□□□□ 0.02
ATPAF2-207ENST00000488753 PNMA6FA0A0J9YX94 578 aa15.16■□□□□ 0.02
ATPAF2-207ENST00000488753 PITPNM1O00562 1244 aa15.16■□□□□ 0.02
ATPAF2-207ENST00000488753 CASTP20810 708 aaKnown RBP15.16■□□□□ 0.02
ATPAF2-207ENST00000488753 KCNA4P22459 653 aa15.16■□□□□ 0.02
ATPAF2-207ENST00000488753 RFC2P35250 354 aa15.16■□□□□ 0.02
ATPAF2-207ENST00000488753 ARHGAP1Q07960 439 aa15.16■□□□□ 0.02
ATPAF2-207ENST00000488753 RAB30Q15771 203 aa15.16■□□□□ 0.02
ATPAF2-207ENST00000488753 LY6KQ17RY6 165 aa15.16■□□□□ 0.02
ATPAF2-207ENST00000488753 FAM47CQ5HY64 1035 aa15.16■□□□□ 0.02
ATPAF2-207ENST00000488753 TMEM67Q5HYA8 995 aa15.16■□□□□ 0.02
ATPAF2-207ENST00000488753 KCNV1Q6PIU1 500 aa15.16■□□□□ 0.02
ATPAF2-207ENST00000488753 SESTD1Q86VW0 696 aa15.16■□□□□ 0.02
ATPAF2-207ENST00000488753 MB21D2Q8IYB1 491 aaPredicted RBP15.16■□□□□ 0.02
ATPAF2-207ENST00000488753 IGDCC4Q8TDY8 1250 aa15.16■□□□□ 0.02
ATPAF2-207ENST00000488753 AFG1LQ8WV93 481 aa15.16■□□□□ 0.02
ATPAF2-207ENST00000488753 PDCD2LQ9BRP1 358 aa15.16■□□□□ 0.02
ATPAF2-207ENST00000488753 PBX4Q9BYU1 374 aa15.16■□□□□ 0.02
ATPAF2-207ENST00000488753 ZNF576Q9H609 170 aa15.16■□□□□ 0.02
ATPAF2-207ENST00000488753 DDX41Q9UJV9 622 aaKnown RBP15.16■□□□□ 0.02
ATPAF2-207ENST00000488753 RBM8AQ9Y5S9 174 aaKnown RBP15.16■□□□□ 0.02
ATPAF2-207ENST00000488753 TAF6LQ9Y6J9 622 aa15.16■□□□□ 0.02
ATPAF2-207ENST00000488753 SCN10AQ9Y5Y9 1956 aa15.15■□□□□ 0.02
ATPAF2-207ENST00000488753 DLL1O00548 723 aa15.15■□□□□ 0.02
ATPAF2-207ENST00000488753 CYTH3O43739 400 aa15.15■□□□□ 0.02
ATPAF2-207ENST00000488753 DDAH1O94760 285 aa15.15■□□□□ 0.02
ATPAF2-207ENST00000488753 MMP3P08254 477 aa15.15■□□□□ 0.02
ATPAF2-207ENST00000488753 CYP2C9P11712 490 aa15.15■□□□□ 0.02
ATPAF2-207ENST00000488753 FOSL2P15408 326 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms