RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	FAM160B2	Q86V87	743 aa		18.38	■□□□□ 0.53
HDLBP-238	ENST00000479894	AFAP1L1	Q8TED9	768 aa		18.38	■□□□□ 0.53
HDLBP-238	ENST00000479894	UPF3B	Q9BZI7	483 aa	Known RBP	18.38	■□□□□ 0.53
HDLBP-238	ENST00000479894	CYP39A1	Q9NYL5	469 aa		18.38	■□□□□ 0.53
HDLBP-238	ENST00000479894	CTNNA3	Q9UI47	895 aa		18.38	■□□□□ 0.53
HDLBP-238	ENST00000479894	SALL3	Q9BXA9	1300 aa		18.38	■□□□□ 0.53
HDLBP-238	ENST00000479894	RBM47	A0AV96	593 aa	Known RBP	18.37	■□□□□ 0.53
HDLBP-238	ENST00000479894	LINC01553	A4QN01	128 aa		18.37	■□□□□ 0.53
HDLBP-238	ENST00000479894	EFCAB14	O75071	495 aa		18.37	■□□□□ 0.53
HDLBP-238	ENST00000479894	CNKSR3	Q6P9H4	555 aa		18.37	■□□□□ 0.53
HDLBP-238	ENST00000479894	CHURC1	Q8WUH1	139 aa		18.37	■□□□□ 0.53
HDLBP-238	ENST00000479894	EVI5L	Q96CN4	794 aa		18.37	■□□□□ 0.53
HDLBP-238	ENST00000479894	WDR11	Q9BZH6	1224 aa		18.37	■□□□□ 0.53
HDLBP-238	ENST00000479894	GTF3C3	Q9Y5Q9	886 aa		18.37	■□□□□ 0.53
HDLBP-238	ENST00000479894	RAD50	Q92878	1312 aa		18.37	■□□□□ 0.53
HDLBP-238	ENST00000479894	ABHD14A-ACY1	A0A1B0GW23	586 aa		18.36	■□□□□ 0.53
HDLBP-238	ENST00000479894	C19orf67	A6NJJ6	358 aa		18.36	■□□□□ 0.53
HDLBP-238	ENST00000479894	NKRF	O15226	690 aa	Known RBP eCLIP	18.36	■□□□□ 0.53
HDLBP-238	ENST00000479894	PLA2G6	O60733	806 aa		18.36	■□□□□ 0.53
HDLBP-238	ENST00000479894	TTLL1	O95922	423 aa		18.36	■□□□□ 0.53
HDLBP-238	ENST00000479894	ZFY	P08048	801 aa	Predicted RBP	18.36	■□□□□ 0.53
HDLBP-238	ENST00000479894	FOXK2	Q01167	660 aa		18.36	■□□□□ 0.53
HDLBP-238	ENST00000479894	ZP2	Q05996	745 aa		18.36	■□□□□ 0.53
HDLBP-238	ENST00000479894	SLFNL1	Q499Z3	407 aa		18.36	■□□□□ 0.53
HDLBP-238	ENST00000479894	SLFN13	Q68D06	897 aa		18.36	■□□□□ 0.53
HDLBP-238	ENST00000479894	GIMAP6	Q6P9H5	292 aa		18.36	■□□□□ 0.53
HDLBP-238	ENST00000479894	HFE2	Q6ZVN8	426 aa		18.36	■□□□□ 0.53
HDLBP-238	ENST00000479894	NLRC5	Q86WI3	1866 aa		18.36	■□□□□ 0.53
HDLBP-238	ENST00000479894	PI4K2B	Q8TCG2	481 aa		18.36	■□□□□ 0.53
HDLBP-238	ENST00000479894	ZNF287	Q9HBT7	754 aa		18.36	■□□□□ 0.53
HDLBP-238	ENST00000479894	MTMR4	Q9NYA4	1195 aa		18.36	■□□□□ 0.53
HDLBP-238	ENST00000479894	ADD3	Q9UEY8	706 aa	Known RBP	18.36	■□□□□ 0.53
HDLBP-238	ENST00000479894	NOD1	Q9Y239	953 aa		18.36	■□□□□ 0.53
HDLBP-238	ENST00000479894	TMEM232	C9JQI7	657 aa		18.35	■□□□□ 0.53
HDLBP-238	ENST00000479894	CXCL10	P02778	98 aa		18.35	■□□□□ 0.53
HDLBP-238	ENST00000479894	ALAS1	P13196	640 aa		18.35	■□□□□ 0.53
HDLBP-238	ENST00000479894	DEFB103A	P81534	67 aa		18.35	■□□□□ 0.53
HDLBP-238	ENST00000479894	RBL2	Q08999	1139 aa		18.35	■□□□□ 0.53
HDLBP-238	ENST00000479894	OR6J1	Q8NGC5	347 aa		18.35	■□□□□ 0.53
HDLBP-238	ENST00000479894	OTUD7A	Q8TE49	926 aa	Predicted RBP	18.35	■□□□□ 0.53
HDLBP-238	ENST00000479894	STAG1	Q8WVM7	1258 aa		18.35	■□□□□ 0.53
HDLBP-238	ENST00000479894	MRPL38	Q96DV4	380 aa	Known RBP	18.35	■□□□□ 0.53
HDLBP-238	ENST00000479894	CEP95	Q96GE4	821 aa		18.35	■□□□□ 0.53
HDLBP-238	ENST00000479894	MTUS1	Q9ULD2	1270 aa		18.35	■□□□□ 0.53
HDLBP-238	ENST00000479894	DDX49	Q9Y6V7	483 aa	Known RBP	18.35	■□□□□ 0.53
HDLBP-238	ENST00000479894	MYO7A	Q13402	2215 aa		18.35	■□□□□ 0.53
HDLBP-238	ENST00000479894	CFAP54	Q96N23	3096 aa		18.35	■□□□□ 0.53
HDLBP-238	ENST00000479894		A6NJR5	290 aa		18.34	■□□□□ 0.53
HDLBP-238	ENST00000479894	GPNMB	Q14956	572 aa		18.34	■□□□□ 0.53
HDLBP-238	ENST00000479894	PTPRO	Q16827	1216 aa		18.34	■□□□□ 0.53
HDLBP-238	ENST00000479894	TIGD5	Q53EQ6	642 aa		18.34	■□□□□ 0.53
HDLBP-238	ENST00000479894	ADHFE1	Q8IWW8	467 aa		18.34	■□□□□ 0.53
HDLBP-238	ENST00000479894	LRRC47	Q8N1G4	583 aa	Known RBP	18.34	■□□□□ 0.53
HDLBP-238	ENST00000479894	PABPC5	Q96DU9	382 aa	Known RBP	18.34	■□□□□ 0.53
HDLBP-238	ENST00000479894	GMCL1	Q96IK5	515 aa		18.34	■□□□□ 0.53
HDLBP-238	ENST00000479894	PRRX2	Q99811	253 aa		18.34	■□□□□ 0.53
HDLBP-238	ENST00000479894	RALGAPA2	Q2PPJ7	1873 aa		18.34	■□□□□ 0.53
HDLBP-238	ENST00000479894	PLIN4	Q96Q06	1357 aa		18.33	■□□□□ 0.53
HDLBP-238	ENST00000479894	TRIM6-TRIM34	B2RNG4	842 aa		18.33	■□□□□ 0.52
HDLBP-238	ENST00000479894	HIP1	O00291	1037 aa		18.33	■□□□□ 0.52
HDLBP-238	ENST00000479894	SELP	P16109	830 aa		18.33	■□□□□ 0.52
HDLBP-238	ENST00000479894	PTPN5	P54829	565 aa		18.33	■□□□□ 0.52
HDLBP-238	ENST00000479894	COL19A1	Q14993	1142 aa		18.33	■□□□□ 0.52
HDLBP-238	ENST00000479894	PTGIS	Q16647	500 aa		18.33	■□□□□ 0.52
HDLBP-238	ENST00000479894	TMCO2	Q7Z6W1	182 aa	Predicted RBP	18.33	■□□□□ 0.52
HDLBP-238	ENST00000479894	SESTD1	Q86VW0	696 aa		18.33	■□□□□ 0.52
HDLBP-238	ENST00000479894	ZNF444	Q8N0Y2	327 aa	Predicted RBP	18.33	■□□□□ 0.52
HDLBP-238	ENST00000479894	KBTBD3	Q8NAB2	608 aa		18.33	■□□□□ 0.52
HDLBP-238	ENST00000479894	FBXO22	Q8NEZ5	403 aa		18.33	■□□□□ 0.52
HDLBP-238	ENST00000479894	PUS7L	Q9H0K6	701 aa	Known RBP	18.33	■□□□□ 0.52
HDLBP-238	ENST00000479894		H3BQ06	376 aa	Predicted RBP	18.32	■□□□□ 0.52
HDLBP-238	ENST00000479894	PDE4A	P27815	886 aa		18.32	■□□□□ 0.52
HDLBP-238	ENST00000479894	ALDH5A1	P51649	535 aa	Predicted RBP	18.32	■□□□□ 0.52
HDLBP-238	ENST00000479894	PKN1	Q16512	942 aa		18.32	■□□□□ 0.52
HDLBP-238	ENST00000479894	MUM1L1	Q5H9M0	696 aa		18.32	■□□□□ 0.52
HDLBP-238	ENST00000479894	LRRC8D	Q7L1W4	858 aa		18.32	■□□□□ 0.52
HDLBP-238	ENST00000479894	BMP8A	Q7Z5Y6	402 aa		18.32	■□□□□ 0.52
HDLBP-238	ENST00000479894	SAMD11	Q96NU1	681 aa		18.32	■□□□□ 0.52
HDLBP-238	ENST00000479894	INSL6	Q9Y581	213 aa		18.32	■□□□□ 0.52
HDLBP-238	ENST00000479894	C5orf42	Q9H799	3197 aa		18.32	■□□□□ 0.52
HDLBP-238	ENST00000479894	ATG2A	Q2TAZ0	1938 aa		18.31	■□□□□ 0.52
HDLBP-238	ENST00000479894	CACNA1H	O95180	2353 aa		18.31	■□□□□ 0.52
HDLBP-238	ENST00000479894	IK	Q13123	557 aa	Predicted RBP	18.31	■□□□□ 0.52
HDLBP-238	ENST00000479894	PPP2R5B	Q15173	497 aa		18.31	■□□□□ 0.52
HDLBP-238	ENST00000479894	HERC4	Q5GLZ8	1057 aa	Predicted RBP	18.31	■□□□□ 0.52
HDLBP-238	ENST00000479894	TTC22	Q5TAA0	569 aa		18.31	■□□□□ 0.52
HDLBP-238	ENST00000479894	TSHZ3	Q63HK5	1081 aa		18.31	■□□□□ 0.52
HDLBP-238	ENST00000479894	NSMF	Q6X4W1	530 aa		18.31	■□□□□ 0.52
HDLBP-238	ENST00000479894	STRBP	Q96SI9	672 aa	Known RBP	18.31	■□□□□ 0.52
HDLBP-238	ENST00000479894	PHOX2B	Q99453	314 aa		18.31	■□□□□ 0.52
HDLBP-238	ENST00000479894	POP1	Q99575	1024 aa	Known RBP	18.31	■□□□□ 0.52
HDLBP-238	ENST00000479894	FSD1	Q9BTV5	496 aa		18.31	■□□□□ 0.52
HDLBP-238	ENST00000479894	SPTBN4	Q9H254	2564 aa		18.31	■□□□□ 0.52
HDLBP-238	ENST00000479894	GSG1L2	A8MUP6	293 aa		18.3	■□□□□ 0.52
HDLBP-238	ENST00000479894	MINDY4B	A8MYZ0	360 aa		18.3	■□□□□ 0.52
HDLBP-238	ENST00000479894	CHGB	P05060	677 aa		18.3	■□□□□ 0.52
HDLBP-238	ENST00000479894	SLC1A4	P43007	532 aa		18.3	■□□□□ 0.52
HDLBP-238	ENST00000479894	IKBKE	Q14164	716 aa		18.3	■□□□□ 0.52
HDLBP-238	ENST00000479894	NEDD1	Q8NHV4	660 aa		18.3	■□□□□ 0.52
HDLBP-238	ENST00000479894	CTAGE1	Q96RT6	745 aa		18.3	■□□□□ 0.52

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